RNA–Protein interactions for RNA: ENST00000543140.5

COL4A1-204, Transcript of collagen type IV alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A1, Length 2,547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1-204ENST00000543140 SCN3AQ9NY46 2000 aa15.52■□□□□ 0.08
COL4A1-204ENST00000543140 TRBV23OR9-2A0A075B6M9 112 aa15.52■□□□□ 0.08
COL4A1-204ENST00000543140 PRSS38A1L453 326 aa15.52■□□□□ 0.08
COL4A1-204ENST00000543140 LRIT2A6NDA9 550 aa15.52■□□□□ 0.08
COL4A1-204ENST00000543140 TNFRSF11BO00300 401 aa15.52■□□□□ 0.08
COL4A1-204ENST00000543140 PRAMEF10O60809 474 aa15.52■□□□□ 0.08
COL4A1-204ENST00000543140 ANGPTL1O95841 491 aa15.52■□□□□ 0.08
COL4A1-204ENST00000543140 FUT4P22083 530 aa15.52■□□□□ 0.08
COL4A1-204ENST00000543140 AK4P27144 223 aaPredicted RBP15.52■□□□□ 0.08
COL4A1-204ENST00000543140 CDH12P55289 794 aa15.52■□□□□ 0.08
COL4A1-204ENST00000543140 IL18R1Q13478 541 aa15.52■□□□□ 0.08
COL4A1-204ENST00000543140 ENPP7Q6UWV6 458 aa15.52■□□□□ 0.08
COL4A1-204ENST00000543140 SZRD1Q7Z422 152 aa15.52■□□□□ 0.08
COL4A1-204ENST00000543140 ALDH16A1Q8IZ83 802 aa15.52■□□□□ 0.08
COL4A1-204ENST00000543140 QRFPRQ96P65 431 aa15.52■□□□□ 0.08
COL4A1-204ENST00000543140 DPH7Q9BTV6 452 aa15.52■□□□□ 0.08
COL4A1-204ENST00000543140 NT5DC2Q9H857 520 aa15.52■□□□□ 0.08
COL4A1-204ENST00000543140 RASSF1Q9NS23 344 aa15.52■□□□□ 0.08
COL4A1-204ENST00000543140 TBC1D29Q9UFV1 150 aa15.52■□□□□ 0.08
COL4A1-204ENST00000543140 BLOC1S6Q9UL45 172 aa15.52■□□□□ 0.08
COL4A1-204ENST00000543140 LYVE1Q9Y5Y7 322 aa15.52■□□□□ 0.08
COL4A1-204ENST00000543140 HAT1O14929 419 aa15.52■□□□□ 0.07
COL4A1-204ENST00000543140 ARAFP10398 606 aa15.52■□□□□ 0.07
COL4A1-204ENST00000543140 SPIBQ01892 262 aa15.52■□□□□ 0.07
COL4A1-204ENST00000543140 HTR4Q13639 388 aa15.52■□□□□ 0.07
COL4A1-204ENST00000543140 SMN1Q16637 294 aaKnown RBP15.52■□□□□ 0.07
COL4A1-204ENST00000543140 LAIR1Q6GTX8 287 aa15.52■□□□□ 0.07
COL4A1-204ENST00000543140 FAHD1Q6P587 224 aa15.52■□□□□ 0.07
COL4A1-204ENST00000543140 ZNF793Q6ZN11 406 aa15.52■□□□□ 0.07
COL4A1-204ENST00000543140 Q6ZPB1 254 aaPredicted RBP15.52■□□□□ 0.07
COL4A1-204ENST00000543140 OR13F1Q8NGS4 319 aa15.52■□□□□ 0.07
COL4A1-204ENST00000543140 OR5P2Q8WZ92 322 aa15.52■□□□□ 0.07
COL4A1-204ENST00000543140 FEVQ99581 238 aa15.52■□□□□ 0.07
COL4A1-204ENST00000543140 DGCR6LQ9BY27 220 aa15.52■□□□□ 0.07
COL4A1-204ENST00000543140 RAD21L1Q9H4I0 556 aa15.52■□□□□ 0.07
COL4A1-204ENST00000543140 ANGPT4Q9Y264 503 aa15.52■□□□□ 0.07
COL4A1-204ENST00000543140 PRR19A6NJB7 356 aa15.51■□□□□ 0.07
COL4A1-204ENST00000543140 C4orf51C9J302 202 aa15.51■□□□□ 0.07
COL4A1-204ENST00000543140 B4GALT2O60909 372 aa15.51■□□□□ 0.07
COL4A1-204ENST00000543140 BCHEP06276 602 aa15.51■□□□□ 0.07
COL4A1-204ENST00000543140 DCKP27707 260 aa15.51■□□□□ 0.07
COL4A1-204ENST00000543140 SERPINB1P30740 379 aa15.51■□□□□ 0.07
COL4A1-204ENST00000543140 TTKP33981 857 aa15.51■□□□□ 0.07
COL4A1-204ENST00000543140 PCBP4P57723 403 aaKnown RBP15.51■□□□□ 0.07
COL4A1-204ENST00000543140 TFF2Q03403 129 aa15.51■□□□□ 0.07
COL4A1-204ENST00000543140 TP53BP2Q13625 1128 aa15.51■□□□□ 0.07
COL4A1-204ENST00000543140 COL9A2Q14055 689 aaPredicted RBP15.51■□□□□ 0.07
COL4A1-204ENST00000543140 TPRG1LQ5T0D9 272 aa15.51■□□□□ 0.07
COL4A1-204ENST00000543140 GPR153Q6NV75 609 aa15.51■□□□□ 0.07
COL4A1-204ENST00000543140 KIAA1324Q6UXG2 1013 aaKnown RBP15.51■□□□□ 0.07
COL4A1-204ENST00000543140 MTSS1LQ765P7 747 aa15.51■□□□□ 0.07
COL4A1-204ENST00000543140 B3GNT8Q7Z7M8 397 aa15.51■□□□□ 0.07
COL4A1-204ENST00000543140 SETD9Q8NE22 299 aa15.51■□□□□ 0.07
COL4A1-204ENST00000543140 OR4E2Q8NGC2 313 aa15.51■□□□□ 0.07
COL4A1-204ENST00000543140 CCL4L1Q8NHW4 92 aa15.51■□□□□ 0.07
COL4A1-204ENST00000543140 KCNC2Q96PR1 638 aa15.51■□□□□ 0.07
COL4A1-204ENST00000543140 ZNF300Q96RE9 604 aaPredicted RBP15.51■□□□□ 0.07
COL4A1-204ENST00000543140 RHNO1Q9BSD3 238 aa15.51■□□□□ 0.07
COL4A1-204ENST00000543140 DDX31Q9H8H2 851 aaKnown RBP15.51■□□□□ 0.07
COL4A1-204ENST00000543140 SYNPO2LQ9H987 977 aa15.51■□□□□ 0.07
COL4A1-204ENST00000543140 RLIMQ9NVW2 624 aa15.51■□□□□ 0.07
COL4A1-204ENST00000543140 KNL1Q8NG31 2342 aa15.51■□□□□ 0.07
COL4A1-204ENST00000543140 CLEC3AO75596 197 aa15.51■□□□□ 0.07
COL4A1-204ENST00000543140 PEBP1P30086 187 aaKnown RBP15.51■□□□□ 0.07
COL4A1-204ENST00000543140 ACSL1P33121 698 aa15.51■□□□□ 0.07
COL4A1-204ENST00000543140 GRK3P35626 688 aa15.51■□□□□ 0.07
COL4A1-204ENST00000543140 RPP38P78345 283 aaKnown RBP15.51■□□□□ 0.07
COL4A1-204ENST00000543140 NPRL3Q12980 569 aa15.51■□□□□ 0.07
COL4A1-204ENST00000543140 LRRC32Q14392 662 aa15.51■□□□□ 0.07
COL4A1-204ENST00000543140 GANABQ14697 944 aaKnown RBP15.51■□□□□ 0.07
COL4A1-204ENST00000543140 DUSP7Q16829 419 aa15.51■□□□□ 0.07
COL4A1-204ENST00000543140 C11orf91Q3C1V1 193 aa15.51■□□□□ 0.07
COL4A1-204ENST00000543140 CRB2Q5IJ48 1285 aa15.51■□□□□ 0.07
COL4A1-204ENST00000543140 NDUFAF5Q5TEU4 345 aa15.51■□□□□ 0.07
COL4A1-204ENST00000543140 KIAA1614Q5VZ46 1190 aa15.51■□□□□ 0.07
COL4A1-204ENST00000543140 CCDC80Q76M96 950 aa15.51■□□□□ 0.07
COL4A1-204ENST00000543140 C6orf120Q7Z4R8 191 aa15.51■□□□□ 0.07
COL4A1-204ENST00000543140 SLC5A8Q8N695 610 aa15.51■□□□□ 0.07
COL4A1-204ENST00000543140 OR2L3Q8NG85 312 aa15.51■□□□□ 0.07
COL4A1-204ENST00000543140 OR8K5Q8NH50 307 aa15.51■□□□□ 0.07
COL4A1-204ENST00000543140 GIPC3Q8TF64 312 aa15.51■□□□□ 0.07
COL4A1-204ENST00000543140 SLC38A5Q8WUX1 472 aa15.51■□□□□ 0.07
COL4A1-204ENST00000543140 OR1E3Q8WZA6 343 aa15.51■□□□□ 0.07
COL4A1-204ENST00000543140 TSACCQ96A04 125 aaPredicted RBP15.51■□□□□ 0.07
COL4A1-204ENST00000543140 FAM131CQ96AQ9 280 aa15.51■□□□□ 0.07
COL4A1-204ENST00000543140 NEURL3Q96EH8 262 aa15.51■□□□□ 0.07
COL4A1-204ENST00000543140 NODALQ96S42 347 aa15.51■□□□□ 0.07
COL4A1-204ENST00000543140 PITHD1Q9GZP4 211 aaPredicted RBP15.51■□□□□ 0.07
COL4A1-204ENST00000543140 MVB12BQ9H7P6 319 aa15.51■□□□□ 0.07
COL4A1-204ENST00000543140 ZBTB32Q9Y2Y4 487 aaPredicted RBP15.51■□□□□ 0.07
COL4A1-204ENST00000543140 A0A0A6YYD5 115 aa15.5■□□□□ 0.07
COL4A1-204ENST00000543140 A0A1W2PPW3 197 aa15.5■□□□□ 0.07
COL4A1-204ENST00000543140 TRBC2A0A5B9 178 aa15.5■□□□□ 0.07
COL4A1-204ENST00000543140 ADAMDEC1O15204 470 aa15.5■□□□□ 0.07
COL4A1-204ENST00000543140 ERI3O43414 337 aaKnown RBP15.5■□□□□ 0.07
COL4A1-204ENST00000543140 MAN1A2O60476 641 aa15.5■□□□□ 0.07
COL4A1-204ENST00000543140 GSTM2P28161 218 aa15.5■□□□□ 0.07
COL4A1-204ENST00000543140 PCBP3P57721 371 aaKnown RBP15.5■□□□□ 0.07
COL4A1-204ENST00000543140 TOP3AQ13472 1001 aaPredicted RBP15.5■□□□□ 0.07
COL4A1-204ENST00000543140 KEAP1Q14145 624 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms