RNA–Protein interactions for RNA: ENST00000541667.5

CLSTN3-211, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 671 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-211ENST00000541667 TGFB1P01137 390 aa10.97□□□□□ -0.65
CLSTN3-211ENST00000541667 C2P06681 752 aa10.97□□□□□ -0.65
CLSTN3-211ENST00000541667 HIST1H1TP22492 207 aaPredicted RBP10.97□□□□□ -0.65
CLSTN3-211ENST00000541667 TNFRSF8P28908 595 aa10.97□□□□□ -0.65
CLSTN3-211ENST00000541667 CRABP2P29373 138 aa10.97□□□□□ -0.65
CLSTN3-211ENST00000541667 RFC3P40938 356 aa10.97□□□□□ -0.65
CLSTN3-211ENST00000541667 MSH2P43246 934 aa10.97□□□□□ -0.65
CLSTN3-211ENST00000541667 IGLV3-21P80748 117 aaPredicted RBP10.97□□□□□ -0.65
CLSTN3-211ENST00000541667 IRF9Q00978 393 aa10.97□□□□□ -0.65
CLSTN3-211ENST00000541667 CAV1Q03135 178 aa10.97□□□□□ -0.65
CLSTN3-211ENST00000541667 LAPTM5Q13571 262 aa10.97□□□□□ -0.65
CLSTN3-211ENST00000541667 DEPDC1Q5TB30 811 aa10.97□□□□□ -0.65
CLSTN3-211ENST00000541667 SYT10Q6XYQ8 523 aa10.97□□□□□ -0.65
CLSTN3-211ENST00000541667 DGAT2L6Q6ZPD8 337 aa10.97□□□□□ -0.65
CLSTN3-211ENST00000541667 MCEMP1Q8IX19 187 aa10.97□□□□□ -0.65
CLSTN3-211ENST00000541667 GHDCQ8N2G8 530 aa10.97□□□□□ -0.65
CLSTN3-211ENST00000541667 MARVELD2Q8N4S9 558 aa10.97□□□□□ -0.65
CLSTN3-211ENST00000541667 POGLUT1Q8NBL1 392 aa10.97□□□□□ -0.65
CLSTN3-211ENST00000541667 MORN4Q8NDC4 146 aa10.97□□□□□ -0.65
CLSTN3-211ENST00000541667 OR52N2Q8NGI0 321 aa10.97□□□□□ -0.65
CLSTN3-211ENST00000541667 ZNF721Q8TF20 911 aa10.97□□□□□ -0.65
CLSTN3-211ENST00000541667 AGAP11Q8TF27 550 aa10.97□□□□□ -0.65
CLSTN3-211ENST00000541667 KCNC2Q96PR1 638 aa10.97□□□□□ -0.65
CLSTN3-211ENST00000541667 TBCDQ9BTW9 1192 aa10.97□□□□□ -0.65
CLSTN3-211ENST00000541667 SORBS1Q9BX66 1292 aaKnown RBP10.97□□□□□ -0.65
CLSTN3-211ENST00000541667 ZNF717Q9BY31 904 aaPredicted RBP10.97□□□□□ -0.65
CLSTN3-211ENST00000541667 OR51B5Q9H339 312 aa10.97□□□□□ -0.65
CLSTN3-211ENST00000541667 NMRAL1Q9HBL8 299 aa10.97□□□□□ -0.65
CLSTN3-211ENST00000541667 NUDT4Q9NZJ9 180 aa10.97□□□□□ -0.65
CLSTN3-211ENST00000541667 TXNDC16Q9P2K2 825 aa10.97□□□□□ -0.65
CLSTN3-211ENST00000541667 FBXW2Q9UKT8 454 aa10.97□□□□□ -0.65
CLSTN3-211ENST00000541667 UTP11Q9Y3A2 253 aaKnown RBP10.97□□□□□ -0.65
CLSTN3-211ENST00000541667 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.97□□□□□ -0.65
CLSTN3-211ENST00000541667 ZNF407Q9C0G0 2248 aa10.97□□□□□ -0.65
CLSTN3-211ENST00000541667 CACNA1CQ13936 2221 aa10.96□□□□□ -0.65
CLSTN3-211ENST00000541667 A0A1B0GTH9 108 aa10.96□□□□□ -0.65
CLSTN3-211ENST00000541667 ESYT3A0FGR9 886 aa10.96□□□□□ -0.65
CLSTN3-211ENST00000541667 LRRC14BA6NHZ5 514 aa10.96□□□□□ -0.65
CLSTN3-211ENST00000541667 KLRC4-KLRK1H3BQV0 150 aa10.96□□□□□ -0.65
CLSTN3-211ENST00000541667 K7EPI3 171 aa10.96□□□□□ -0.65
CLSTN3-211ENST00000541667 HS6ST1O60243 411 aa10.96□□□□□ -0.65
CLSTN3-211ENST00000541667 SH3BGRLO75368 114 aa10.96□□□□□ -0.65
CLSTN3-211ENST00000541667 OR6B1O95007 311 aa10.96□□□□□ -0.65
CLSTN3-211ENST00000541667 LTA4HP09960 611 aaKnown RBP10.96□□□□□ -0.65
CLSTN3-211ENST00000541667 ZNF24P17028 368 aa10.96□□□□□ -0.65
CLSTN3-211ENST00000541667 CASQ1P31415 396 aa10.96□□□□□ -0.65
CLSTN3-211ENST00000541667 HK2P52789 917 aa10.96□□□□□ -0.65
CLSTN3-211ENST00000541667 GPR85P60893 370 aa10.96□□□□□ -0.65
CLSTN3-211ENST00000541667 SLC7A5Q01650 507 aa10.96□□□□□ -0.65
CLSTN3-211ENST00000541667 TMEM35AQ53FP2 167 aa10.96□□□□□ -0.65
CLSTN3-211ENST00000541667 EMC4Q5J8M3 183 aa10.96□□□□□ -0.65
CLSTN3-211ENST00000541667 PAGE2BQ5JRK9 111 aa10.96□□□□□ -0.65
CLSTN3-211ENST00000541667 MED27Q6P2C8 311 aa10.96□□□□□ -0.65
CLSTN3-211ENST00000541667 C3P1Q6ZMU1 363 aa10.96□□□□□ -0.65
CLSTN3-211ENST00000541667 CYP4Z2PQ8N1L4 340 aa10.96□□□□□ -0.65
CLSTN3-211ENST00000541667 TMEM132CQ8N3T6 1108 aa10.96□□□□□ -0.65
CLSTN3-211ENST00000541667 FAM98AQ8NCA5 519 aaKnown RBP10.96□□□□□ -0.65
CLSTN3-211ENST00000541667 HUS1BQ8NHY5 278 aa10.96□□□□□ -0.65
CLSTN3-211ENST00000541667 RHEBL1Q8TAI7 183 aa10.96□□□□□ -0.65
CLSTN3-211ENST00000541667 PHF10Q8WUB8 498 aaKnown RBP10.96□□□□□ -0.65
CLSTN3-211ENST00000541667 KCTD4Q8WVF5 259 aa10.96□□□□□ -0.65
CLSTN3-211ENST00000541667 EXT2Q93063 718 aa10.96□□□□□ -0.65
CLSTN3-211ENST00000541667 UCN3Q969E3 161 aa10.96□□□□□ -0.65
CLSTN3-211ENST00000541667 TMEM125Q96AQ2 219 aa10.96□□□□□ -0.65
CLSTN3-211ENST00000541667 MAGED4Q96JG8 741 aa10.96□□□□□ -0.65
CLSTN3-211ENST00000541667 RASL10BQ96S79 203 aa10.96□□□□□ -0.65
CLSTN3-211ENST00000541667 LRRC1Q9BTT6 524 aa10.96□□□□□ -0.65
CLSTN3-211ENST00000541667 TRIM8Q9BZR9 551 aa10.96□□□□□ -0.65
CLSTN3-211ENST00000541667 KLF13Q9Y2Y9 288 aaPredicted RBP10.96□□□□□ -0.65
CLSTN3-211ENST00000541667 TSC22D4Q9Y3Q8 395 aa10.96□□□□□ -0.65
CLSTN3-211ENST00000541667 DNAJC13O75165 2243 aa10.96□□□□□ -0.66
CLSTN3-211ENST00000541667 OTOGQ6ZRI0 2925 aa10.95□□□□□ -0.66
CLSTN3-211ENST00000541667 A0A088AWK7 358 aa10.95□□□□□ -0.66
CLSTN3-211ENST00000541667 A0A0G2JMM0 328 aa10.95□□□□□ -0.66
CLSTN3-211ENST00000541667 A0A1W2PPB8 328 aa10.95□□□□□ -0.66
CLSTN3-211ENST00000541667 A0A1W2PRS3 328 aa10.95□□□□□ -0.66
CLSTN3-211ENST00000541667 KIR3DP1A8MWS1 328 aa10.95□□□□□ -0.66
CLSTN3-211ENST00000541667 E9PLN8 166 aa10.95□□□□□ -0.66
CLSTN3-211ENST00000541667 HRKO00198 91 aa10.95□□□□□ -0.66
CLSTN3-211ENST00000541667 WWP2O00308 870 aa10.95□□□□□ -0.66
CLSTN3-211ENST00000541667 SAP18O00422 153 aaKnown RBP10.95□□□□□ -0.66
CLSTN3-211ENST00000541667 FGF17O60258 216 aa10.95□□□□□ -0.66
CLSTN3-211ENST00000541667 GLSO94925 669 aaPredicted RBP10.95□□□□□ -0.66
CLSTN3-211ENST00000541667 MLYCDO95822 493 aa10.95□□□□□ -0.66
CLSTN3-211ENST00000541667 ALDOAP04075 364 aaKnown RBP10.95□□□□□ -0.66
CLSTN3-211ENST00000541667 IGKV3-11P04433 115 aa10.95□□□□□ -0.66
CLSTN3-211ENST00000541667 ESRRAP11474 423 aaPredicted RBP10.95□□□□□ -0.66
CLSTN3-211ENST00000541667 ZNF10P21506 573 aaPredicted RBP10.95□□□□□ -0.66
CLSTN3-211ENST00000541667 HPDP32754 393 aaPredicted RBP10.95□□□□□ -0.66
CLSTN3-211ENST00000541667 SOX3P41225 446 aa10.95□□□□□ -0.66
CLSTN3-211ENST00000541667 SSR4P51571 173 aa10.95□□□□□ -0.66
CLSTN3-211ENST00000541667 CASP6P55212 293 aa10.95□□□□□ -0.66
CLSTN3-211ENST00000541667 RNF4P78317 190 aa10.95□□□□□ -0.66
CLSTN3-211ENST00000541667 ID2Q02363 134 aa10.95□□□□□ -0.66
CLSTN3-211ENST00000541667 SLAMF1Q13291 335 aa10.95□□□□□ -0.66
CLSTN3-211ENST00000541667 NAB1Q13506 487 aa10.95□□□□□ -0.66
CLSTN3-211ENST00000541667 BMPR2Q13873 1038 aa10.95□□□□□ -0.66
CLSTN3-211ENST00000541667 NAA30Q147X3 362 aaPredicted RBP10.95□□□□□ -0.66
CLSTN3-211ENST00000541667 SETDB1Q15047 1291 aa10.95□□□□□ -0.66
CLSTN3-211ENST00000541667 HIST2H2ACQ16777 129 aaPredicted RBP10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms