RNA–Protein interactions for RNA: ENST00000541586.5

CCM2-218, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,719 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-218ENST00000541586 SH3BP4Q9P0V3 963 aa26.34■■□□□ 1.81
CCM2-218ENST00000541586 EFCAB7A8K855 629 aa26.33■■□□□ 1.81
CCM2-218ENST00000541586 FOLR1P15328 257 aa26.33■■□□□ 1.81
CCM2-218ENST00000541586 RPL3P39023 403 aaKnown RBP26.33■■□□□ 1.81
CCM2-218ENST00000541586 DEFB110Q30KQ9 67 aa26.33■■□□□ 1.81
CCM2-218ENST00000541586 DNAJC14Q6Y2X3 702 aaPredicted RBP26.33■■□□□ 1.81
CCM2-218ENST00000541586 RAB11FIP2Q7L804 512 aa26.33■■□□□ 1.81
CCM2-218ENST00000541586 TMPRSS7Q7RTY8 843 aa26.33■■□□□ 1.81
CCM2-218ENST00000541586 R3HCC1LQ7Z5L2 792 aaKnown RBP26.33■■□□□ 1.81
CCM2-218ENST00000541586 KMT5CQ86Y97 462 aa26.33■■□□□ 1.81
CCM2-218ENST00000541586 DNAJB8Q8NHS0 232 aa26.33■■□□□ 1.81
CCM2-218ENST00000541586 WBP11Q9Y2W2 641 aaKnown RBP26.33■■□□□ 1.81
CCM2-218ENST00000541586 A0A096LPI6 279 aa26.32■■□□□ 1.8
CCM2-218ENST00000541586 C15orf38-AP3S2A0A0A6YYH1 394 aa26.32■■□□□ 1.8
CCM2-218ENST00000541586 P2RX6O15547 441 aa26.32■■□□□ 1.8
CCM2-218ENST00000541586 RAB8AP61006 207 aa26.32■■□□□ 1.8
CCM2-218ENST00000541586 ZNF385BQ569K4 471 aa26.32■■□□□ 1.8
CCM2-218ENST00000541586 LRIF1Q5T3J3 769 aa26.32■■□□□ 1.8
CCM2-218ENST00000541586 TMTC4Q5T4D3 741 aa26.32■■□□□ 1.8
CCM2-218ENST00000541586 ARPINQ7Z6K5 226 aa26.32■■□□□ 1.8
CCM2-218ENST00000541586 MSRB3Q8IXL7 192 aa26.32■■□□□ 1.8
CCM2-218ENST00000541586 MMP21Q8N119 569 aa26.32■■□□□ 1.8
CCM2-218ENST00000541586 D2HGDHQ8N465 521 aa26.32■■□□□ 1.8
CCM2-218ENST00000541586 N4BP2L2Q92802 583 aaPredicted RBP26.32■■□□□ 1.8
CCM2-218ENST00000541586 MIEF2Q96C03 454 aa26.32■■□□□ 1.8
CCM2-218ENST00000541586 MTERF3Q96E29 417 aa26.32■■□□□ 1.8
CCM2-218ENST00000541586 TBCDQ9BTW9 1192 aa26.32■■□□□ 1.8
CCM2-218ENST00000541586 SLC6A13Q9NSD5 602 aa26.32■■□□□ 1.8
CCM2-218ENST00000541586 SLC25A37Q9NYZ2 338 aa26.32■■□□□ 1.8
CCM2-218ENST00000541586 L3MBTL1Q9Y468 752 aa26.32■■□□□ 1.8
CCM2-218ENST00000541586 LOXL2Q9Y4K0 774 aa26.32■■□□□ 1.8
CCM2-218ENST00000541586 COL27A1Q8IZC6 1860 aaPredicted RBP26.32■■□□□ 1.8
CCM2-218ENST00000541586 H0YGG7 62 aa26.31■■□□□ 1.8
CCM2-218ENST00000541586 ERN1O75460 977 aaKnown RBP26.31■■□□□ 1.8
CCM2-218ENST00000541586 CCL4P13236 92 aa26.31■■□□□ 1.8
CCM2-218ENST00000541586 HIST1H1TP22492 207 aaPredicted RBP26.31■■□□□ 1.8
CCM2-218ENST00000541586 ARF3P61204 181 aaPredicted RBP26.31■■□□□ 1.8
CCM2-218ENST00000541586 MS4A2Q01362 244 aa26.31■■□□□ 1.8
CCM2-218ENST00000541586 KLC1Q07866 573 aa26.31■■□□□ 1.8
CCM2-218ENST00000541586 OR8K5Q8NH50 307 aa26.31■■□□□ 1.8
CCM2-218ENST00000541586 GAL3ST3Q96A11 431 aa26.31■■□□□ 1.8
CCM2-218ENST00000541586 RERGQ96A58 199 aaPredicted RBP26.31■■□□□ 1.8
CCM2-218ENST00000541586 PPCDCQ96CD2 204 aa26.31■■□□□ 1.8
CCM2-218ENST00000541586 GMPR2Q9P2T1 348 aaKnown RBP26.31■■□□□ 1.8
CCM2-218ENST00000541586 SUCOQ9UBS9 1254 aaKnown RBP26.31■■□□□ 1.8
CCM2-218ENST00000541586 CROCCQ5TZA2 2017 aa26.31■■□□□ 1.8
CCM2-218ENST00000541586 KIF26BQ2KJY2 2108 aa26.31■■□□□ 1.8
CCM2-218ENST00000541586 RFXANKO14593 260 aa26.31■■□□□ 1.8
CCM2-218ENST00000541586 HCRTR1O43613 425 aa26.31■■□□□ 1.8
CCM2-218ENST00000541586 ATP5A1P25705 553 aaKnown RBP26.31■■□□□ 1.8
CCM2-218ENST00000541586 CDKN2CP42773 168 aa26.31■■□□□ 1.8
CCM2-218ENST00000541586 GSTM5P46439 218 aa26.31■■□□□ 1.8
CCM2-218ENST00000541586 ERFP50548 548 aa26.31■■□□□ 1.8
CCM2-218ENST00000541586 GPR19Q15760 415 aa26.31■■□□□ 1.8
CCM2-218ENST00000541586 GTDC1Q4AE62 458 aa26.31■■□□□ 1.8
CCM2-218ENST00000541586 ACOT4Q8N9L9 421 aa26.31■■□□□ 1.8
CCM2-218ENST00000541586 CAMKVQ8NCB2 501 aa26.31■■□□□ 1.8
CCM2-218ENST00000541586 LIN37Q96GY3 246 aaPredicted RBP26.31■■□□□ 1.8
CCM2-218ENST00000541586 ANKRD27Q96NW4 1050 aa26.31■■□□□ 1.8
CCM2-218ENST00000541586 BHLHE41Q9C0J9 482 aaPredicted RBP26.31■■□□□ 1.8
CCM2-218ENST00000541586 ATAD3AQ9NVI7 634 aa26.31■■□□□ 1.8
CCM2-218ENST00000541586 PCDHB14Q9Y5E9 798 aa26.31■■□□□ 1.8
CCM2-218ENST00000541586 TRBV5-3A0A0A0MS03 114 aa26.3■■□□□ 1.8
CCM2-218ENST00000541586 PRSS51A0A1B0GVH4 220 aa26.3■■□□□ 1.8
CCM2-218ENST00000541586 HOXB9P17482 250 aaPredicted RBP26.3■■□□□ 1.8
CCM2-218ENST00000541586 ITIH1P19827 911 aa26.3■■□□□ 1.8
CCM2-218ENST00000541586 DDCP20711 480 aa26.3■■□□□ 1.8
CCM2-218ENST00000541586 PTPN6P29350 595 aa26.3■■□□□ 1.8
CCM2-218ENST00000541586 TSFMP43897 325 aaKnown RBP26.3■■□□□ 1.8
CCM2-218ENST00000541586 TRA2BP62995 288 aaKnown RBP26.3■■□□□ 1.8
CCM2-218ENST00000541586 TGM3Q08188 693 aa26.3■■□□□ 1.8
CCM2-218ENST00000541586 SELPLGQ14242 412 aa26.3■■□□□ 1.8
CCM2-218ENST00000541586 C3orf38Q5JPI3 329 aa26.3■■□□□ 1.8
CCM2-218ENST00000541586 ANXA8L1Q5VT79 327 aa26.3■■□□□ 1.8
CCM2-218ENST00000541586 CLECL1Q8IZS7 167 aa26.3■■□□□ 1.8
CCM2-218ENST00000541586 OR8J3Q8NGG0 315 aa26.3■■□□□ 1.8
CCM2-218ENST00000541586 ASB9Q96DX5 294 aa26.3■■□□□ 1.8
CCM2-218ENST00000541586 OR6C1Q96RD1 312 aa26.3■■□□□ 1.8
CCM2-218ENST00000541586 MIEF1Q9NQG6 463 aa26.3■■□□□ 1.8
CCM2-218ENST00000541586 NIPSNAP3AQ9UFN0 247 aaPredicted RBP26.3■■□□□ 1.8
CCM2-218ENST00000541586 GSNP06396 782 aa26.29■■□□□ 1.8
CCM2-218ENST00000541586 FAM58BPP0C7Q3 252 aa26.29■■□□□ 1.8
CCM2-218ENST00000541586 JMJD7P0C870 316 aa26.29■■□□□ 1.8
CCM2-218ENST00000541586 ZNF888P0CJ79 500 aaPredicted RBP26.29■■□□□ 1.8
CCM2-218ENST00000541586 EFNA1P20827 205 aaPredicted RBP26.29■■□□□ 1.8
CCM2-218ENST00000541586 TRPC1P48995 793 aa26.29■■□□□ 1.8
CCM2-218ENST00000541586 MTPNP58546 118 aa26.29■■□□□ 1.8
CCM2-218ENST00000541586 COL9A2Q14055 689 aaPredicted RBP26.29■■□□□ 1.8
CCM2-218ENST00000541586 CCNIQ14094 377 aa26.29■■□□□ 1.8
CCM2-218ENST00000541586 TRIM25Q14258 630 aaKnown RBP26.29■■□□□ 1.8
CCM2-218ENST00000541586 SLC9A5Q14940 896 aa26.29■■□□□ 1.8
CCM2-218ENST00000541586 HEPACAMQ14CZ8 416 aa26.29■■□□□ 1.8
CCM2-218ENST00000541586 MUM1Q2TAK8 710 aa26.29■■□□□ 1.8
CCM2-218ENST00000541586 TICAM1Q8IUC6 712 aa26.29■■□□□ 1.8
CCM2-218ENST00000541586 VPS37AQ8NEZ2 397 aa26.29■■□□□ 1.8
CCM2-218ENST00000541586 UTP15Q8TED0 518 aaKnown RBP26.29■■□□□ 1.8
CCM2-218ENST00000541586 IRAK4Q9NWZ3 460 aa26.29■■□□□ 1.8
CCM2-218ENST00000541586 TEX10Q9NXF1 929 aaPredicted RBP26.29■■□□□ 1.8
CCM2-218ENST00000541586 SATB2Q9UPW6 733 aa26.29■■□□□ 1.8
CCM2-218ENST00000541586 CCDC187A0A096LP49 1063 aa26.28■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms