RNA–Protein interactions for RNA: ENST00000541216.1

RAP1B-224, Transcript of RAP1B, member of RAS oncogene family, humanhuman

TSL 1 (best) BASIC

Gene RAP1B, Length 701 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAP1B-224ENST00000541216 CDHR3Q6ZTQ4 885 aa3.45□□□□□ -1.86
RAP1B-224ENST00000541216 KRTAP5-5Q701N2 237 aaPredicted RBP3.45□□□□□ -1.86
RAP1B-224ENST00000541216 HOOK3Q86VS8 718 aa3.45□□□□□ -1.86
RAP1B-224ENST00000541216 KCNMB4Q86W47 210 aa3.45□□□□□ -1.86
RAP1B-224ENST00000541216 KLHDC8AQ8IYD2 350 aa3.45□□□□□ -1.86
RAP1B-224ENST00000541216 LYG1Q8N1E2 194 aa3.45□□□□□ -1.86
RAP1B-224ENST00000541216 POM121L12Q8N7R1 296 aa3.45□□□□□ -1.86
RAP1B-224ENST00000541216 FIBINQ8TAL6 211 aa3.45□□□□□ -1.86
RAP1B-224ENST00000541216 SPPL2AQ8TCT8 520 aa3.45□□□□□ -1.86
RAP1B-224ENST00000541216 SEPT8Q92599 483 aa3.45□□□□□ -1.86
RAP1B-224ENST00000541216 ATF6BQ99941 703 aa3.45□□□□□ -1.86
RAP1B-224ENST00000541216 PINK1Q9BXM7 581 aa3.45□□□□□ -1.86
RAP1B-224ENST00000541216 ACPTQ9BZG2 426 aa3.45□□□□□ -1.86
RAP1B-224ENST00000541216 OCR1Q9BZK8 76 aa3.45□□□□□ -1.86
RAP1B-224ENST00000541216 HEXA-AS1Q9H8Q6 139 aa3.45□□□□□ -1.86
RAP1B-224ENST00000541216 DNAJC17Q9NVM6 304 aaKnown RBP3.45□□□□□ -1.86
RAP1B-224ENST00000541216 LEF1Q9UJU2 399 aaPredicted RBP3.45□□□□□ -1.86
RAP1B-224ENST00000541216 FER1L5A0AVI2 2057 aa3.44□□□□□ -1.86
RAP1B-224ENST00000541216 PLA2R1Q13018 1463 aa3.44□□□□□ -1.86
RAP1B-224ENST00000541216 TRBV5-4A0A0C4DH59 114 aa3.44□□□□□ -1.86
RAP1B-224ENST00000541216 C2orf92A0A1B0GVN3 265 aa3.44□□□□□ -1.86
RAP1B-224ENST00000541216 A0A1W2PNU3 283 aaPredicted RBP3.44□□□□□ -1.86
RAP1B-224ENST00000541216 SHISA9B4DS77 424 aa3.44□□□□□ -1.86
RAP1B-224ENST00000541216 ZNF749O43361 778 aa3.44□□□□□ -1.86
RAP1B-224ENST00000541216 STX6O43752 255 aa3.44□□□□□ -1.86
RAP1B-224ENST00000541216 CLN5O75503 358 aa3.44□□□□□ -1.86
RAP1B-224ENST00000541216 PRDM1O75626 825 aa3.44□□□□□ -1.86
RAP1B-224ENST00000541216 OR6B1O95007 311 aa3.44□□□□□ -1.86
RAP1B-224ENST00000541216 ODC1P11926 461 aa3.44□□□□□ -1.86
RAP1B-224ENST00000541216 BCL3P20749 454 aa3.44□□□□□ -1.86
RAP1B-224ENST00000541216 ACKR3P25106 362 aa3.44□□□□□ -1.86
RAP1B-224ENST00000541216 GJB2P29033 226 aa3.44□□□□□ -1.86
RAP1B-224ENST00000541216 OXTRP30559 389 aa3.44□□□□□ -1.86
RAP1B-224ENST00000541216 FCGR2BP31994 310 aaPredicted RBP3.44□□□□□ -1.86
RAP1B-224ENST00000541216 FCGR2CP31995 323 aa3.44□□□□□ -1.86
RAP1B-224ENST00000541216 OR1D2P34982 312 aa3.44□□□□□ -1.86
RAP1B-224ENST00000541216 MAGEB1P43366 347 aa3.44□□□□□ -1.86
RAP1B-224ENST00000541216 SIX1Q15475 284 aaPredicted RBP3.44□□□□□ -1.86
RAP1B-224ENST00000541216 ZNF841Q6ZN19 808 aa3.44□□□□□ -1.86
RAP1B-224ENST00000541216 TIPARPQ7Z3E1 657 aaKnown RBP3.44□□□□□ -1.86
RAP1B-224ENST00000541216 NLRP14Q86W24 1093 aa3.44□□□□□ -1.86
RAP1B-224ENST00000541216 RNF130Q86XS8 419 aa3.44□□□□□ -1.86
RAP1B-224ENST00000541216 ERC1Q8IUD2 1116 aa3.44□□□□□ -1.86
RAP1B-224ENST00000541216 TUSC5Q8IXB3 177 aa3.44□□□□□ -1.86
RAP1B-224ENST00000541216 OR4N5Q8IXE1 308 aa3.44□□□□□ -1.86
RAP1B-224ENST00000541216 OR13C5Q8NGS8 318 aa3.44□□□□□ -1.86
RAP1B-224ENST00000541216 RFT1Q96AA3 541 aa3.44□□□□□ -1.86
RAP1B-224ENST00000541216 TAAR6Q96RI8 345 aa3.44□□□□□ -1.86
RAP1B-224ENST00000541216 HNRNPABQ99729 332 aaKnown RBP3.44□□□□□ -1.86
RAP1B-224ENST00000541216 ZNF559Q9BR84 538 aa3.44□□□□□ -1.86
RAP1B-224ENST00000541216 UTP14AQ9BVJ6 771 aaKnown RBP3.44□□□□□ -1.86
RAP1B-224ENST00000541216 JPT2Q9H910 190 aa3.44□□□□□ -1.86
RAP1B-224ENST00000541216 GTSE1Q9NYZ3 720 aa3.44□□□□□ -1.86
RAP1B-224ENST00000541216 FBXL5Q9UKA1 691 aa3.44□□□□□ -1.86
RAP1B-224ENST00000541216 LIPT1Q9Y234 373 aa3.44□□□□□ -1.86
RAP1B-224ENST00000541216 DENND4BO75064 1496 aaPredicted RBP3.43□□□□□ -1.86
RAP1B-224ENST00000541216 NEO1Q92859 1461 aa3.43□□□□□ -1.86
RAP1B-224ENST00000541216 RAPGEF2Q9Y4G8 1499 aa3.43□□□□□ -1.86
RAP1B-224ENST00000541216 CCDC162PA2VCL2 907 aa3.43□□□□□ -1.86
RAP1B-224ENST00000541216 TCP10L2B9ZVM9 353 aa3.43□□□□□ -1.86
RAP1B-224ENST00000541216 M0R296 226 aa3.43□□□□□ -1.86
RAP1B-224ENST00000541216 ATP9AO75110 1047 aa3.43□□□□□ -1.86
RAP1B-224ENST00000541216 SRSF10O75494 262 aaKnown RBP3.43□□□□□ -1.86
RAP1B-224ENST00000541216 GRAP2O75791 330 aa3.43□□□□□ -1.86
RAP1B-224ENST00000541216 LETM1O95202 739 aaPredicted RBP3.43□□□□□ -1.86
RAP1B-224ENST00000541216 C8orf89P0DMQ9 161 aa3.43□□□□□ -1.86
RAP1B-224ENST00000541216 ST8SIA6P61647 398 aa3.43□□□□□ -1.86
RAP1B-224ENST00000541216 SRPXP78539 464 aa3.43□□□□□ -1.86
RAP1B-224ENST00000541216 FCHO2Q0JRZ9 810 aa3.43□□□□□ -1.86
RAP1B-224ENST00000541216 GCKRQ14397 625 aa3.43□□□□□ -1.86
RAP1B-224ENST00000541216 NFE2L1Q14494 772 aa3.43□□□□□ -1.86
RAP1B-224ENST00000541216 NEPROQ6NW34 567 aa3.43□□□□□ -1.86
RAP1B-224ENST00000541216 RFPL4BQ6ZWI9 263 aa3.43□□□□□ -1.86
RAP1B-224ENST00000541216 Q71RC1 249 aaPredicted RBP3.43□□□□□ -1.86
RAP1B-224ENST00000541216 PIWIL3Q7Z3Z3 882 aaKnown RBP3.43□□□□□ -1.86
RAP1B-224ENST00000541216 ANKRD23Q86SG2 305 aa3.43□□□□□ -1.86
RAP1B-224ENST00000541216 RPAINQ86UA6 219 aa3.43□□□□□ -1.86
RAP1B-224ENST00000541216 CDC20BQ86Y33 519 aa3.43□□□□□ -1.86
RAP1B-224ENST00000541216 CACUL1Q86Y37 369 aa3.43□□□□□ -1.86
RAP1B-224ENST00000541216 RNF149Q8NC42 400 aa3.43□□□□□ -1.86
RAP1B-224ENST00000541216 C8orf46Q8TAG6 207 aa3.43□□□□□ -1.86
RAP1B-224ENST00000541216 UBLCP1Q8WVY7 318 aaPredicted RBP3.43□□□□□ -1.86
RAP1B-224ENST00000541216 LIPHQ8WWY8 451 aa3.43□□□□□ -1.86
RAP1B-224ENST00000541216 TEKT1Q969V4 418 aa3.43□□□□□ -1.86
RAP1B-224ENST00000541216 JAKMIP1Q96N16 626 aaKnown RBP3.43□□□□□ -1.86
RAP1B-224ENST00000541216 ALKBH3Q96Q83 286 aaPredicted RBP3.43□□□□□ -1.86
RAP1B-224ENST00000541216 DCTN5Q9BTE1 182 aa3.43□□□□□ -1.86
RAP1B-224ENST00000541216 IDI2Q9BXS1 227 aa3.43□□□□□ -1.86
RAP1B-224ENST00000541216 MTIF3Q9H2K0 278 aaKnown RBP3.43□□□□□ -1.86
RAP1B-224ENST00000541216 VIPAS39Q9H9C1 493 aa3.43□□□□□ -1.86
RAP1B-224ENST00000541216 COPS7BQ9H9Q2 264 aaPredicted RBP3.43□□□□□ -1.86
RAP1B-224ENST00000541216 WDR41Q9HAD4 459 aa3.43□□□□□ -1.86
RAP1B-224ENST00000541216 CNIH4Q9P003 139 aa3.43□□□□□ -1.86
RAP1B-224ENST00000541216 TSPAN16Q9UKR8 245 aa3.43□□□□□ -1.86
RAP1B-224ENST00000541216 ZFP37Q9Y6Q3 630 aaPredicted RBP3.43□□□□□ -1.86
RAP1B-224ENST00000541216 EFCAB5A4FU69 1503 aa3.43□□□□□ -1.86
RAP1B-224ENST00000541216 ERICH3Q5RHP9 1530 aa3.43□□□□□ -1.86
RAP1B-224ENST00000541216 JCADQ9P266 1359 aa3.42□□□□□ -1.86
RAP1B-224ENST00000541216 MAGEB16A2A368 324 aa3.42□□□□□ -1.86
RAP1B-224ENST00000541216 RAD51DO75771 328 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms