RNA–Protein interactions for RNA: ENST00000540755.5

CYB561A3-216, Transcript of cytochrome b561 family member A3, humanhuman

TSL 1 (best)

Gene CYB561A3, Length 1,494 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYB561A3-216ENST00000540755 COPS7BQ9H9Q2 264 aaPredicted RBP13.51□□□□□ -0.25
CYB561A3-216ENST00000540755 EHD3Q9NZN3 535 aa13.51□□□□□ -0.25
CYB561A3-216ENST00000540755 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.51□□□□□ -0.25
CYB561A3-216ENST00000540755 ASB4Q9Y574 426 aa13.51□□□□□ -0.25
CYB561A3-216ENST00000540755 ANKRD11Q6UB99 2663 aaPredicted RBP13.51□□□□□ -0.25
CYB561A3-216ENST00000540755 ACOT8O14734 319 aa13.5□□□□□ -0.25
CYB561A3-216ENST00000540755 B4GAT1O43505 415 aa13.5□□□□□ -0.25
CYB561A3-216ENST00000540755 PCDHGA12O60330 932 aa13.5□□□□□ -0.25
CYB561A3-216ENST00000540755 SRPX2O60687 465 aaPredicted RBP13.5□□□□□ -0.25
CYB561A3-216ENST00000540755 BCAS2O75934 225 aaPredicted RBP13.5□□□□□ -0.25
CYB561A3-216ENST00000540755 B3GALT4O96024 378 aa13.5□□□□□ -0.25
CYB561A3-216ENST00000540755 ZCCHC18P0CG32 403 aa13.5□□□□□ -0.25
CYB561A3-216ENST00000540755 CD59P13987 128 aa13.5□□□□□ -0.25
CYB561A3-216ENST00000540755 TCN1P20061 433 aaPredicted RBP13.5□□□□□ -0.25
CYB561A3-216ENST00000540755 CERS1P27544 350 aa13.5□□□□□ -0.25
CYB561A3-216ENST00000540755 CDKN2CP42773 168 aa13.5□□□□□ -0.25
CYB561A3-216ENST00000540755 PPM1FP49593 454 aaPredicted RBP13.5□□□□□ -0.25
CYB561A3-216ENST00000540755 MS4A2Q01362 244 aa13.5□□□□□ -0.25
CYB561A3-216ENST00000540755 LIPEQ05469 1076 aa13.5□□□□□ -0.25
CYB561A3-216ENST00000540755 BNIP2Q12982 314 aa13.5□□□□□ -0.25
CYB561A3-216ENST00000540755 MUM1Q2TAK8 710 aa13.5□□□□□ -0.25
CYB561A3-216ENST00000540755 NKAIN2Q5VXU1 208 aa13.5□□□□□ -0.25
CYB561A3-216ENST00000540755 TMEM214Q6NUQ4 689 aaKnown RBP13.5□□□□□ -0.25
CYB561A3-216ENST00000540755 UNQ6494/PRO21346Q6UXR6 183 aa13.5□□□□□ -0.25
CYB561A3-216ENST00000540755 DNAJC14Q6Y2X3 702 aaPredicted RBP13.5□□□□□ -0.25
CYB561A3-216ENST00000540755 PLXDC1Q8IUK5 500 aa13.5□□□□□ -0.25
CYB561A3-216ENST00000540755 FAM47BQ8NA70 645 aa13.5□□□□□ -0.25
CYB561A3-216ENST00000540755 GOT1L1Q8NHS2 421 aaPredicted RBP13.5□□□□□ -0.25
CYB561A3-216ENST00000540755 SERINC2Q96SA4 455 aa13.5□□□□□ -0.25
CYB561A3-216ENST00000540755 MUC13Q9H3R2 512 aa13.5□□□□□ -0.25
CYB561A3-216ENST00000540755 ALG2Q9H553 416 aa13.5□□□□□ -0.25
CYB561A3-216ENST00000540755 SLC6A13Q9NSD5 602 aa13.5□□□□□ -0.25
CYB561A3-216ENST00000540755 TEX10Q9NXF1 929 aaPredicted RBP13.5□□□□□ -0.25
CYB561A3-216ENST00000540755 TAS2R7Q9NYW3 318 aa13.5□□□□□ -0.25
CYB561A3-216ENST00000540755 SEMA5BQ9P283 1151 aa13.5□□□□□ -0.25
CYB561A3-216ENST00000540755 MN1Q10571 1320 aaPredicted RBP13.5□□□□□ -0.25
CYB561A3-216ENST00000540755 SCN3AQ9NY46 2000 aa13.5□□□□□ -0.25
CYB561A3-216ENST00000540755 NUP214P35658 2090 aaPredicted RBP13.5□□□□□ -0.25
CYB561A3-216ENST00000540755 DSPP15924 2871 aaKnown RBP13.49□□□□□ -0.25
CYB561A3-216ENST00000540755 LY6G6EA0A0G2JKS1 128 aa13.49□□□□□ -0.25
CYB561A3-216ENST00000540755 SIGLEC6O43699 453 aa13.49□□□□□ -0.25
CYB561A3-216ENST00000540755 KIF1CO43896 1103 aaKnown RBP13.49□□□□□ -0.25
CYB561A3-216ENST00000540755 ZBTB11O95625 1053 aaPredicted RBP13.49□□□□□ -0.25
CYB561A3-216ENST00000540755 ANP32DO95626 131 aa13.49□□□□□ -0.25
CYB561A3-216ENST00000540755 ALOX12P18054 663 aa13.49□□□□□ -0.25
CYB561A3-216ENST00000540755 CD1CP29017 333 aa13.49□□□□□ -0.25
CYB561A3-216ENST00000540755 GABRA4P48169 554 aa13.49□□□□□ -0.25
CYB561A3-216ENST00000540755 GSK3BP49841 420 aa13.49□□□□□ -0.25
CYB561A3-216ENST00000540755 VSX2P58304 361 aaPredicted RBP13.49□□□□□ -0.25
CYB561A3-216ENST00000540755 MTPNP58546 118 aa13.49□□□□□ -0.25
CYB561A3-216ENST00000540755 BTN3A2P78410 334 aa13.49□□□□□ -0.25
CYB561A3-216ENST00000540755 CCNIQ14094 377 aa13.49□□□□□ -0.25
CYB561A3-216ENST00000540755 SELPLGQ14242 412 aa13.49□□□□□ -0.25
CYB561A3-216ENST00000540755 FLOT2Q14254 428 aa13.49□□□□□ -0.25
CYB561A3-216ENST00000540755 FXNQ16595 210 aa13.49□□□□□ -0.25
CYB561A3-216ENST00000540755 MPEG1Q2M385 716 aa13.49□□□□□ -0.25
CYB561A3-216ENST00000540755 GTDC1Q4AE62 458 aa13.49□□□□□ -0.25
CYB561A3-216ENST00000540755 NDUFAF5Q5TEU4 345 aa13.49□□□□□ -0.25
CYB561A3-216ENST00000540755 WDR74Q6RFH5 385 aaPredicted RBP13.49□□□□□ -0.25
CYB561A3-216ENST00000540755 SPRED1Q7Z699 444 aa13.49□□□□□ -0.25
CYB561A3-216ENST00000540755 MCATQ8IVS2 390 aaKnown RBP13.49□□□□□ -0.25
CYB561A3-216ENST00000540755 CLECL1Q8IZS7 167 aa13.49□□□□□ -0.25
CYB561A3-216ENST00000540755 MMP21Q8N119 569 aa13.49□□□□□ -0.25
CYB561A3-216ENST00000540755 FAM156AQ8NDB6 213 aa13.49□□□□□ -0.25
CYB561A3-216ENST00000540755 GATA6Q92908 595 aa13.49□□□□□ -0.25
CYB561A3-216ENST00000540755 CCDC74AQ96AQ1 378 aa13.49□□□□□ -0.25
CYB561A3-216ENST00000540755 ZNF285Q96NJ3 590 aa13.49□□□□□ -0.25
CYB561A3-216ENST00000540755 CPPED1Q9BRF8 314 aaPredicted RBP13.49□□□□□ -0.25
CYB561A3-216ENST00000540755 SCNM1Q9BWG6 230 aa13.49□□□□□ -0.25
CYB561A3-216ENST00000540755 TRIM8Q9BZR9 551 aa13.49□□□□□ -0.25
CYB561A3-216ENST00000540755 PDE7BQ9NP56 450 aa13.49□□□□□ -0.25
CYB561A3-216ENST00000540755 DNAAF2Q9NVR5 837 aaKnown RBP13.49□□□□□ -0.25
CYB561A3-216ENST00000540755 STOML1Q9UBI4 398 aa13.49□□□□□ -0.25
CYB561A3-216ENST00000540755 ZNF282Q9UDV7 671 aaPredicted RBP13.49□□□□□ -0.25
CYB561A3-216ENST00000540755 GMEB1Q9Y692 573 aa13.49□□□□□ -0.25
CYB561A3-216ENST00000540755 SLC22A7Q9Y694 548 aa13.49□□□□□ -0.25
CYB561A3-216ENST00000540755 U3KQA8 63 aa13.49□□□□□ -0.25
CYB561A3-216ENST00000540755 IGHV5-51A0A0C4DH38 117 aa13.48□□□□□ -0.25
CYB561A3-216ENST00000540755 C1orf226A1L170 272 aa13.48□□□□□ -0.25
CYB561A3-216ENST00000540755 EME2A4GXA9 379 aaPredicted RBP13.48□□□□□ -0.25
CYB561A3-216ENST00000540755 HCRTR1O43613 425 aa13.48□□□□□ -0.25
CYB561A3-216ENST00000540755 PSMG1O95456 288 aa13.48□□□□□ -0.25
CYB561A3-216ENST00000540755 CPSF4O95639 269 aaKnown RBP13.48□□□□□ -0.25
CYB561A3-216ENST00000540755 EIF2S1P05198 315 aaKnown RBP13.48□□□□□ -0.25
CYB561A3-216ENST00000540755 MYF5P13349 255 aa13.48□□□□□ -0.25
CYB561A3-216ENST00000540755 CSF2RBP32927 897 aa13.48□□□□□ -0.25
CYB561A3-216ENST00000540755 MLLT3P42568 568 aaPredicted RBP13.48□□□□□ -0.25
CYB561A3-216ENST00000540755 FRKP42685 505 aaPredicted RBP13.48□□□□□ -0.25
CYB561A3-216ENST00000540755 CFHR1Q03591 330 aa13.48□□□□□ -0.25
CYB561A3-216ENST00000540755 SQSTM1Q13501 440 aa13.48□□□□□ -0.25
CYB561A3-216ENST00000540755 PRSS53Q2L4Q9 553 aa13.48□□□□□ -0.25
CYB561A3-216ENST00000540755 PRTGQ2VWP7 1150 aa13.48□□□□□ -0.25
CYB561A3-216ENST00000540755 PRSS42Q7Z5A4 293 aa13.48□□□□□ -0.25
CYB561A3-216ENST00000540755 PTRH1Q86Y79 214 aaKnown RBP13.48□□□□□ -0.25
CYB561A3-216ENST00000540755 Q8N9G6 341 aaPredicted RBP13.48□□□□□ -0.25
CYB561A3-216ENST00000540755 OR4A15Q8NGL6 344 aa13.48□□□□□ -0.25
CYB561A3-216ENST00000540755 ZCCHC10Q8TBK6 192 aa13.48□□□□□ -0.25
CYB561A3-216ENST00000540755 NAT6Q93015 286 aa13.48□□□□□ -0.25
CYB561A3-216ENST00000540755 CIDECQ96AQ7 238 aaPredicted RBP13.48□□□□□ -0.25
CYB561A3-216ENST00000540755 KCTD14Q9BQ13 255 aaPredicted RBP13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 84.7 ms