RNA–Protein interactions for RNA: ENST00000540608.5

NPC1-202, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 2,790 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-202ENST00000540608 ZSCAN5AQ9BUG6 496 aa11.74□□□□□ -0.53
NPC1-202ENST00000540608 RC3H2Q9HBD1 1191 aaKnown RBP11.74□□□□□ -0.53
NPC1-202ENST00000540608 MYNNQ9NPC7 610 aa11.74□□□□□ -0.53
NPC1-202ENST00000540608 RHCGQ9UBD6 479 aa11.74□□□□□ -0.53
NPC1-202ENST00000540608 KCND3Q9UK17 655 aa11.74□□□□□ -0.53
NPC1-202ENST00000540608 GRIP1Q9Y3R0 1128 aa11.74□□□□□ -0.53
NPC1-202ENST00000540608 A0A1W2PRB8 838 aa11.73□□□□□ -0.53
NPC1-202ENST00000540608 WASH3PC4AMC7 463 aa11.73□□□□□ -0.53
NPC1-202ENST00000540608 CAPN5O15484 640 aaPredicted RBP11.73□□□□□ -0.53
NPC1-202ENST00000540608 ENTPD6O75354 484 aa11.73□□□□□ -0.53
NPC1-202ENST00000540608 NPPBP16860 134 aa11.73□□□□□ -0.53
NPC1-202ENST00000540608 ZNF24P17028 368 aa11.73□□□□□ -0.53
NPC1-202ENST00000540608 POU1F1P28069 291 aa11.73□□□□□ -0.53
NPC1-202ENST00000540608 GJA8P48165 433 aa11.73□□□□□ -0.53
NPC1-202ENST00000540608 STARD3Q14849 445 aa11.73□□□□□ -0.53
NPC1-202ENST00000540608 UNC5DQ6UXZ4 953 aa11.73□□□□□ -0.53
NPC1-202ENST00000540608 SLAIN1Q8ND83 568 aa11.73□□□□□ -0.53
NPC1-202ENST00000540608 MTERF3Q96E29 417 aa11.73□□□□□ -0.53
NPC1-202ENST00000540608 TMEM121BQ9BXQ6 578 aaPredicted RBP11.73□□□□□ -0.53
NPC1-202ENST00000540608 OR2B2Q9GZK3 357 aa11.73□□□□□ -0.53
NPC1-202ENST00000540608 RACGAP1Q9H0H5 632 aa11.73□□□□□ -0.53
NPC1-202ENST00000540608 TPK1Q9H3S4 243 aa11.73□□□□□ -0.53
NPC1-202ENST00000540608 DMRT3Q9NQL9 472 aa11.73□□□□□ -0.53
NPC1-202ENST00000540608 ZNF221Q9UK13 617 aa11.73□□□□□ -0.53
NPC1-202ENST00000540608 LSM2Q9Y333 95 aaKnown RBP11.73□□□□□ -0.53
NPC1-202ENST00000540608 PCDHGB2Q9Y5G2 931 aa11.73□□□□□ -0.53
NPC1-202ENST00000540608 SAP18O00422 153 aaKnown RBP11.73□□□□□ -0.53
NPC1-202ENST00000540608 TGFB1P01137 390 aa11.73□□□□□ -0.53
NPC1-202ENST00000540608 ENDOUP21128 410 aaKnown RBP11.73□□□□□ -0.53
NPC1-202ENST00000540608 TAS2R50P59544 299 aa11.73□□□□□ -0.53
NPC1-202ENST00000540608 PUM1Q14671 1186 aaKnown RBP eCLIP11.73□□□□□ -0.53
NPC1-202ENST00000540608 NCF4Q15080 339 aa11.73□□□□□ -0.53
NPC1-202ENST00000540608 DUSP7Q16829 419 aa11.73□□□□□ -0.53
NPC1-202ENST00000540608 PRSS53Q2L4Q9 553 aa11.73□□□□□ -0.53
NPC1-202ENST00000540608 MEDAGQ5VYS4 303 aa11.73□□□□□ -0.53
NPC1-202ENST00000540608 ASTLQ6HA08 431 aaPredicted RBP11.73□□□□□ -0.53
NPC1-202ENST00000540608 TAGAPQ8N103 731 aa11.73□□□□□ -0.53
NPC1-202ENST00000540608 OR2A12Q8NGT7 310 aa11.73□□□□□ -0.53
NPC1-202ENST00000540608 ZNF480Q8WV37 535 aa11.73□□□□□ -0.53
NPC1-202ENST00000540608 VWCEQ96DN2 955 aa11.73□□□□□ -0.53
NPC1-202ENST00000540608 EFCAB11Q9BUY7 163 aa11.73□□□□□ -0.53
NPC1-202ENST00000540608 BARHL1Q9BZE3 327 aa11.73□□□□□ -0.53
NPC1-202ENST00000540608 ASAH2Q9NR71 780 aa11.73□□□□□ -0.53
NPC1-202ENST00000540608 GULP1Q9UBP9 304 aa11.73□□□□□ -0.53
NPC1-202ENST00000540608 REV1Q9UBZ9 1251 aa11.73□□□□□ -0.53
NPC1-202ENST00000540608 NDOR1Q9UHB4 597 aa11.73□□□□□ -0.53
NPC1-202ENST00000540608 N6AMT1Q9Y5N5 214 aa11.73□□□□□ -0.53
NPC1-202ENST00000540608 A0A1W2PRU2 124 aa11.73□□□□□ -0.53
NPC1-202ENST00000540608 TLR4O00206 839 aa11.73□□□□□ -0.53
NPC1-202ENST00000540608 LEFTY2O00292 366 aa11.73□□□□□ -0.53
NPC1-202ENST00000540608 FFAR1O14842 300 aa11.73□□□□□ -0.53
NPC1-202ENST00000540608 ADAP00813 363 aa11.73□□□□□ -0.53
NPC1-202ENST00000540608 C1GALT1C1LP0DN25 315 aa11.73□□□□□ -0.53
NPC1-202ENST00000540608 OSMP13725 252 aa11.73□□□□□ -0.53
NPC1-202ENST00000540608 PDHA2P29803 388 aa11.73□□□□□ -0.53
NPC1-202ENST00000540608 PRLHRP49683 370 aa11.73□□□□□ -0.53
NPC1-202ENST00000540608 RORCP51449 518 aa11.73□□□□□ -0.53
NPC1-202ENST00000540608 DSTNP60981 165 aa11.73□□□□□ -0.53
NPC1-202ENST00000540608 FOXD4Q12950 439 aaPredicted RBP11.73□□□□□ -0.53
NPC1-202ENST00000540608 ILKQ13418 452 aa11.73□□□□□ -0.53
NPC1-202ENST00000540608 GPR50Q13585 617 aa11.73□□□□□ -0.53
NPC1-202ENST00000540608 SLBPQ14493 270 aaKnown RBP eCLIP11.73□□□□□ -0.53
NPC1-202ENST00000540608 IER5LQ5T953 404 aa11.73□□□□□ -0.53
NPC1-202ENST00000540608 PRR23CQ6ZRP0 262 aa11.73□□□□□ -0.53
NPC1-202ENST00000540608 FAM92BQ6ZTR7 304 aa11.73□□□□□ -0.53
NPC1-202ENST00000540608 NRARPQ7Z6K4 114 aa11.73□□□□□ -0.53
NPC1-202ENST00000540608 TRIM69Q86WT6 500 aa11.73□□□□□ -0.53
NPC1-202ENST00000540608 KLHL6Q8WZ60 621 aa11.73□□□□□ -0.53
NPC1-202ENST00000540608 TP53INP1Q96A56 240 aa11.73□□□□□ -0.53
NPC1-202ENST00000540608 TMEM80Q96HE8 168 aa11.73□□□□□ -0.53
NPC1-202ENST00000540608 IL4I1Q96RQ9 567 aa11.73□□□□□ -0.53
NPC1-202ENST00000540608 UCK2Q9BZX2 261 aa11.73□□□□□ -0.53
NPC1-202ENST00000540608 OR51B5Q9H339 312 aa11.73□□□□□ -0.53
NPC1-202ENST00000540608 CCDC177Q9NQR7 707 aaPredicted RBP11.73□□□□□ -0.53
NPC1-202ENST00000540608 NFKBIL1Q9UBC1 381 aaPredicted RBP11.73□□□□□ -0.53
NPC1-202ENST00000540608 SEC14L4Q9UDX3 406 aa11.73□□□□□ -0.53
NPC1-202ENST00000540608 TRBV4-1A0A0J9YWV2 114 aa11.72□□□□□ -0.53
NPC1-202ENST00000540608 C1orf105O95561 183 aa11.72□□□□□ -0.53
NPC1-202ENST00000540608 CRYBB2P43320 205 aa11.72□□□□□ -0.53
NPC1-202ENST00000540608 VEGFBP49765 207 aa11.72□□□□□ -0.53
NPC1-202ENST00000540608 TMEM115Q12893 351 aaPredicted RBP11.72□□□□□ -0.53
NPC1-202ENST00000540608 SPHARQ15513 63 aa11.72□□□□□ -0.53
NPC1-202ENST00000540608 TMEM201Q5SNT2 666 aa11.72□□□□□ -0.53
NPC1-202ENST00000540608 HIST2H2AA3Q6FI13 130 aa11.72□□□□□ -0.53
NPC1-202ENST00000540608 REEP3Q6NUK4 255 aa11.72□□□□□ -0.53
NPC1-202ENST00000540608 TMC8Q8IU68 726 aa11.72□□□□□ -0.53
NPC1-202ENST00000540608 FBXO15Q8NCQ5 510 aaPredicted RBP11.72□□□□□ -0.53
NPC1-202ENST00000540608 ASB15Q8WXK1 588 aa11.72□□□□□ -0.53
NPC1-202ENST00000540608 MYLIPQ8WY64 445 aa11.72□□□□□ -0.53
NPC1-202ENST00000540608 EXOSC4Q9NPD3 245 aaKnown RBP11.72□□□□□ -0.53
NPC1-202ENST00000540608 PCDH10Q9P2E7 1040 aa11.72□□□□□ -0.53
NPC1-202ENST00000540608 CLEC2DQ9UHP7 191 aa11.72□□□□□ -0.53
NPC1-202ENST00000540608 MUTYHQ9UIF7 546 aa11.72□□□□□ -0.53
NPC1-202ENST00000540608 SH2B3Q9UQQ2 575 aa11.72□□□□□ -0.53
NPC1-202ENST00000540608 DYRK1BQ9Y463 629 aa11.72□□□□□ -0.53
NPC1-202ENST00000540608 PCM1Q15154 2024 aa11.72□□□□□ -0.53
NPC1-202ENST00000540608 MYOFQ9NZM1 2061 aa11.72□□□□□ -0.53
NPC1-202ENST00000540608 TRAV19A0A0A6YYK7 116 aa11.72□□□□□ -0.53
NPC1-202ENST00000540608 PIPSLA2A3N6 862 aa11.72□□□□□ -0.53
NPC1-202ENST00000540608 SLC35F4A4IF30 521 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms