RNA–Protein interactions for RNA: ENST00000540445.5

LMO3-222, Transcript of LIM domain only 3, humanhuman

TSL 2 BASIC

Gene LMO3, Length 906 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-222ENST00000540445 MTERF1Q99551 399 aaKnown RBP8.41□□□□□ -1.06
LMO3-222ENST00000540445 MAPKAP1Q9BPZ7 522 aa8.41□□□□□ -1.06
LMO3-222ENST00000540445 CENPKQ9BS16 269 aa8.41□□□□□ -1.06
LMO3-222ENST00000540445 OR51B5Q9H339 312 aa8.41□□□□□ -1.06
LMO3-222ENST00000540445 ACTR8Q9H981 624 aa8.41□□□□□ -1.06
LMO3-222ENST00000540445 LIN28AQ9H9Z2 209 aaKnown RBP8.41□□□□□ -1.06
LMO3-222ENST00000540445 LYRM4Q9HD34 91 aa8.41□□□□□ -1.06
LMO3-222ENST00000540445 ADAP2Q9NPF8 381 aa8.41□□□□□ -1.06
LMO3-222ENST00000540445 SNX15Q9NRS6 342 aa8.41□□□□□ -1.06
LMO3-222ENST00000540445 CPSF2Q9P2I0 782 aaKnown RBP8.41□□□□□ -1.06
LMO3-222ENST00000540445 SUCOQ9UBS9 1254 aaKnown RBP8.41□□□□□ -1.06
LMO3-222ENST00000540445 ADGRE2Q9UHX3 823 aa8.41□□□□□ -1.06
LMO3-222ENST00000540445 ERVK-11Q9UQG0 969 aa8.41□□□□□ -1.06
LMO3-222ENST00000540445 DCHS2Q6V1P9 2916 aa8.41□□□□□ -1.06
LMO3-222ENST00000540445 APCP25054 2843 aa8.41□□□□□ -1.06
LMO3-222ENST00000540445 DNAJC13O75165 2243 aa8.4□□□□□ -1.06
LMO3-222ENST00000540445 HMX2A2RU54 273 aa8.4□□□□□ -1.06
LMO3-222ENST00000540445 POC1B-GALNT4F8VUJ3 575 aa8.4□□□□□ -1.06
LMO3-222ENST00000540445 ASNA1O43681 348 aa8.4□□□□□ -1.06
LMO3-222ENST00000540445 SLC19A2O60779 497 aa8.4□□□□□ -1.06
LMO3-222ENST00000540445 INHBAP08476 426 aa8.4□□□□□ -1.06
LMO3-222ENST00000540445 CTAGE8P0CG41 777 aa8.4□□□□□ -1.06
LMO3-222ENST00000540445 MTHFD2P13995 350 aa8.4□□□□□ -1.06
LMO3-222ENST00000540445 HIST1H1TP22492 207 aaPredicted RBP8.4□□□□□ -1.06
LMO3-222ENST00000540445 SERPINB1P30740 379 aa8.4□□□□□ -1.06
LMO3-222ENST00000540445 TLX1P31314 330 aaPredicted RBP8.4□□□□□ -1.06
LMO3-222ENST00000540445 SERPINB8P50452 374 aa8.4□□□□□ -1.06
LMO3-222ENST00000540445 ALDH18A1P54886 795 aaKnown RBP8.4□□□□□ -1.06
LMO3-222ENST00000540445 PHEXP78562 749 aa8.4□□□□□ -1.06
LMO3-222ENST00000540445 ID2Q02363 134 aa8.4□□□□□ -1.06
LMO3-222ENST00000540445 SLAMF1Q13291 335 aa8.4□□□□□ -1.06
LMO3-222ENST00000540445 GTF2H2Q13888 395 aa8.4□□□□□ -1.06
LMO3-222ENST00000540445 SERTAD2Q14140 314 aa8.4□□□□□ -1.06
LMO3-222ENST00000540445 SETDB1Q15047 1291 aa8.4□□□□□ -1.06
LMO3-222ENST00000540445 TERF2Q15554 542 aa8.4□□□□□ -1.06
LMO3-222ENST00000540445 ELAVL1Q15717 326 aaKnown RBP8.4□□□□□ -1.06
LMO3-222ENST00000540445 CPSF6Q16630 551 aaKnown RBP eCLIP8.4□□□□□ -1.06
LMO3-222ENST00000540445 DEPDC1Q5TB30 811 aa8.4□□□□□ -1.06
LMO3-222ENST00000540445 KHDRBS2Q5VWX1 349 aaKnown RBP8.4□□□□□ -1.06
LMO3-222ENST00000540445 LIPJQ5W064 366 aa8.4□□□□□ -1.06
LMO3-222ENST00000540445 SP5Q6BEB4 398 aaPredicted RBP8.4□□□□□ -1.06
LMO3-222ENST00000540445 OR4C11Q6IEV9 310 aa8.4□□□□□ -1.06
LMO3-222ENST00000540445 GRHL2Q6ISB3 625 aa8.4□□□□□ -1.06
LMO3-222ENST00000540445 GTF2H2CQ6P1K8 395 aa8.4□□□□□ -1.06
LMO3-222ENST00000540445 MTFR2Q6P444 385 aa8.4□□□□□ -1.06
LMO3-222ENST00000540445 UBE3DQ7Z6J8 389 aa8.4□□□□□ -1.06
LMO3-222ENST00000540445 SULF2Q8IWU5 870 aa8.4□□□□□ -1.06
LMO3-222ENST00000540445 CTAGE4Q8IX94 777 aa8.4□□□□□ -1.06
LMO3-222ENST00000540445 LAS2Q8IYD9 372 aa8.4□□□□□ -1.06
LMO3-222ENST00000540445 CENPLQ8N0S6 344 aaPredicted RBP8.4□□□□□ -1.06
LMO3-222ENST00000540445 CYP4Z2PQ8N1L4 340 aa8.4□□□□□ -1.06
LMO3-222ENST00000540445 RNF175Q8N4F7 328 aa8.4□□□□□ -1.06
LMO3-222ENST00000540445 CPSF7Q8N684 471 aaKnown RBP8.4□□□□□ -1.06
LMO3-222ENST00000540445 HUS1BQ8NHY5 278 aa8.4□□□□□ -1.06
LMO3-222ENST00000540445 UHMK1Q8TAS1 419 aaKnown RBP8.4□□□□□ -1.06
LMO3-222ENST00000540445 REPS1Q96D71 796 aa8.4□□□□□ -1.06
LMO3-222ENST00000540445 MTFMTQ96DP5 389 aaKnown RBP8.4□□□□□ -1.06
LMO3-222ENST00000540445 RBM18Q96H35 190 aaKnown RBP8.4□□□□□ -1.06
LMO3-222ENST00000540445 MAGED4Q96JG8 741 aa8.4□□□□□ -1.06
LMO3-222ENST00000540445 FMO2Q99518 471 aa8.4□□□□□ -1.06
LMO3-222ENST00000540445 MS4A8Q9BY19 250 aa8.4□□□□□ -1.06
LMO3-222ENST00000540445 OR8D2Q9GZM6 311 aa8.4□□□□□ -1.06
LMO3-222ENST00000540445 CDC42EP4Q9H3Q1 356 aaKnown RBP8.4□□□□□ -1.06
LMO3-222ENST00000540445 IPPKQ9H8X2 491 aa8.4□□□□□ -1.06
LMO3-222ENST00000540445 NINJ2Q9NZG7 142 aa8.4□□□□□ -1.06
LMO3-222ENST00000540445 KCMF1Q9P0J7 381 aa8.4□□□□□ -1.06
LMO3-222ENST00000540445 VTI1BQ9UEU0 232 aa8.4□□□□□ -1.06
LMO3-222ENST00000540445 DMGDHQ9UI17 866 aaKnown RBP8.4□□□□□ -1.06
LMO3-222ENST00000540445 YARS2Q9Y2Z4 477 aaKnown RBP8.4□□□□□ -1.06
LMO3-222ENST00000540445 PCDHGA11Q9Y5H2 935 aa8.4□□□□□ -1.06
LMO3-222ENST00000540445 TNPO3Q9Y5L0 923 aaKnown RBP8.4□□□□□ -1.06
LMO3-222ENST00000540445 FBN2P35556 2912 aa8.39□□□□□ -1.07
LMO3-222ENST00000540445 CCDC189A1A4V9 331 aa8.39□□□□□ -1.07
LMO3-222ENST00000540445 ASPDHA6ND91 283 aa8.39□□□□□ -1.07
LMO3-222ENST00000540445 SYNDIG1LA6NDD5 238 aa8.39□□□□□ -1.07
LMO3-222ENST00000540445 LRRC14BA6NHZ5 514 aa8.39□□□□□ -1.07
LMO3-222ENST00000540445 A8MVJ9 347 aa8.39□□□□□ -1.07
LMO3-222ENST00000540445 C17orf105B2RV13 164 aa8.39□□□□□ -1.07
LMO3-222ENST00000540445 PRSS44E7EML9 344 aa8.39□□□□□ -1.07
LMO3-222ENST00000540445 TGFBR3LH3BV60 316 aa8.39□□□□□ -1.07
LMO3-222ENST00000540445 WWP2O00308 870 aa8.39□□□□□ -1.07
LMO3-222ENST00000540445 NME2P1O60361 137 aa8.39□□□□□ -1.07
LMO3-222ENST00000540445 OR2J2O76002 312 aa8.39□□□□□ -1.07
LMO3-222ENST00000540445 SIX3O95343 332 aaPredicted RBP8.39□□□□□ -1.07
LMO3-222ENST00000540445 RBP1P09455 135 aa8.39□□□□□ -1.07
LMO3-222ENST00000540445 COX7A2P14406 83 aa8.39□□□□□ -1.07
LMO3-222ENST00000540445 ABOP16442 354 aa8.39□□□□□ -1.07
LMO3-222ENST00000540445 ZNF24P17028 368 aa8.39□□□□□ -1.07
LMO3-222ENST00000540445 NME2P22392 152 aa8.39□□□□□ -1.07
LMO3-222ENST00000540445 PTX3P26022 381 aaPredicted RBP8.39□□□□□ -1.07
LMO3-222ENST00000540445 TRHRP34981 398 aaPredicted RBP8.39□□□□□ -1.07
LMO3-222ENST00000540445 PIK3CBP42338 1070 aa8.39□□□□□ -1.07
LMO3-222ENST00000540445 CA7P43166 264 aa8.39□□□□□ -1.07
LMO3-222ENST00000540445 SSR4P51571 173 aa8.39□□□□□ -1.07
LMO3-222ENST00000540445 RPS13P62277 151 aaKnown RBP8.39□□□□□ -1.07
LMO3-222ENST00000540445 PCBP2Q15366 365 aaKnown RBP eCLIP8.39□□□□□ -1.07
LMO3-222ENST00000540445 GLE1Q53GS7 698 aaKnown RBP8.39□□□□□ -1.07
LMO3-222ENST00000540445 TTC19Q6DKK2 380 aaPredicted RBP8.39□□□□□ -1.07
LMO3-222ENST00000540445 IL20RBQ6UXL0 311 aa8.39□□□□□ -1.07
LMO3-222ENST00000540445 HSDL2Q6YN16 418 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms