RNA–Protein interactions for RNA: ENST00000539737.6

USB1-203, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,212 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-203ENST00000539737 OPTCQ9UBM4 332 aa13.98□□□□□ -0.17
USB1-203ENST00000539737 TBK1Q9UHD2 729 aa13.98□□□□□ -0.17
USB1-203ENST00000539737 TNPO3Q9Y5L0 923 aaKnown RBP13.98□□□□□ -0.17
USB1-203ENST00000539737 ZNF407Q9C0G0 2248 aa13.98□□□□□ -0.17
USB1-203ENST00000539737 URADA6NGE7 173 aa13.97□□□□□ -0.17
USB1-203ENST00000539737 K7EPI3 171 aa13.97□□□□□ -0.17
USB1-203ENST00000539737 OR1F1O43749 312 aa13.97□□□□□ -0.17
USB1-203ENST00000539737 KLK8O60259 260 aa13.97□□□□□ -0.17
USB1-203ENST00000539737 CDC40O60508 579 aaKnown RBP eCLIP13.97□□□□□ -0.17
USB1-203ENST00000539737 SMIM24O75264 130 aa13.97□□□□□ -0.17
USB1-203ENST00000539737 H2AFYO75367 372 aaKnown RBP13.97□□□□□ -0.17
USB1-203ENST00000539737 SP1P08047 785 aa13.97□□□□□ -0.17
USB1-203ENST00000539737 GSTA1P08263 222 aa13.97□□□□□ -0.17
USB1-203ENST00000539737 MTHFD2P13995 350 aa13.97□□□□□ -0.17
USB1-203ENST00000539737 AGAP20933 346 aa13.97□□□□□ -0.17
USB1-203ENST00000539737 IL10P22301 178 aa13.97□□□□□ -0.17
USB1-203ENST00000539737 GSTM2P28161 218 aa13.97□□□□□ -0.17
USB1-203ENST00000539737 TPP2P29144 1249 aaPredicted RBP13.97□□□□□ -0.17
USB1-203ENST00000539737 AHRP35869 848 aa13.97□□□□□ -0.17
USB1-203ENST00000539737 SLCO1A2P46721 670 aa13.97□□□□□ -0.17
USB1-203ENST00000539737 SCTRP47872 440 aa13.97□□□□□ -0.17
USB1-203ENST00000539737 PIK3CGP48736 1102 aa13.97□□□□□ -0.17
USB1-203ENST00000539737 AGTR2P50052 363 aa13.97□□□□□ -0.17
USB1-203ENST00000539737 MEF2AQ02078 507 aaPredicted RBP13.97□□□□□ -0.17
USB1-203ENST00000539737 RGS1Q08116 209 aa13.97□□□□□ -0.17
USB1-203ENST00000539737 IFFO1Q0D2I5 559 aa13.97□□□□□ -0.17
USB1-203ENST00000539737 SNTB1Q13884 538 aaKnown RBP13.97□□□□□ -0.17
USB1-203ENST00000539737 HERC3Q15034 1050 aa13.97□□□□□ -0.17
USB1-203ENST00000539737 PFKFB4Q16877 469 aa13.97□□□□□ -0.17
USB1-203ENST00000539737 SLCO4C1Q6ZQN7 724 aa13.97□□□□□ -0.17
USB1-203ENST00000539737 CD163Q86VB7 1156 aa13.97□□□□□ -0.17
USB1-203ENST00000539737 CCDC71Q8IV32 467 aaPredicted RBP13.97□□□□□ -0.17
USB1-203ENST00000539737 MMP21Q8N119 569 aa13.97□□□□□ -0.17
USB1-203ENST00000539737 KRT78Q8N1N4 520 aa13.97□□□□□ -0.17
USB1-203ENST00000539737 RIBC1Q8N443 379 aaPredicted RBP13.97□□□□□ -0.17
USB1-203ENST00000539737 ACBD4Q8NC06 268 aa13.97□□□□□ -0.17
USB1-203ENST00000539737 TTLQ8NG68 377 aa13.97□□□□□ -0.17
USB1-203ENST00000539737 EPS8L3Q8TE67 593 aaKnown RBP13.97□□□□□ -0.17
USB1-203ENST00000539737 CA5BP1Q8WTZ4 195 aa13.97□□□□□ -0.17
USB1-203ENST00000539737 MZB1Q8WU39 189 aa13.97□□□□□ -0.17
USB1-203ENST00000539737 PTCD3Q96EY7 689 aaKnown RBP13.97□□□□□ -0.17
USB1-203ENST00000539737 SPOCK3Q9BQ16 436 aa13.97□□□□□ -0.17
USB1-203ENST00000539737 EFCAB11Q9BUY7 163 aa13.97□□□□□ -0.17
USB1-203ENST00000539737 LRFN1Q9P244 771 aa13.97□□□□□ -0.17
USB1-203ENST00000539737 VPS13CQ709C8 3753 aa13.97□□□□□ -0.17
USB1-203ENST00000539737 DNAJC13O75165 2243 aa13.96□□□□□ -0.17
USB1-203ENST00000539737 A0A1B0GTH9 108 aa13.96□□□□□ -0.17
USB1-203ENST00000539737 SMIM23A6NLE4 172 aa13.96□□□□□ -0.17
USB1-203ENST00000539737 NDUFS4O43181 175 aa13.96□□□□□ -0.17
USB1-203ENST00000539737 PDE9AO76083 593 aa13.96□□□□□ -0.17
USB1-203ENST00000539737 SERPIND1P05546 499 aa13.96□□□□□ -0.17
USB1-203ENST00000539737 TPOP07202 933 aa13.96□□□□□ -0.17
USB1-203ENST00000539737 C1GALT1C1LP0DN25 315 aa13.96□□□□□ -0.17
USB1-203ENST00000539737 CD46P15529 392 aa13.96□□□□□ -0.17
USB1-203ENST00000539737 HOXB4P17483 251 aaPredicted RBP13.96□□□□□ -0.17
USB1-203ENST00000539737 KRT15P19012 456 aa13.96□□□□□ -0.17
USB1-203ENST00000539737 RHAGQ02094 409 aa13.96□□□□□ -0.17
USB1-203ENST00000539737 ACTN3Q08043 901 aaPredicted RBP13.96□□□□□ -0.17
USB1-203ENST00000539737 PWP1Q13610 501 aa13.96□□□□□ -0.17
USB1-203ENST00000539737 SLBPQ14493 270 aaKnown RBP eCLIP13.96□□□□□ -0.17
USB1-203ENST00000539737 ABRAXAS2Q15018 415 aa13.96□□□□□ -0.17
USB1-203ENST00000539737 MEP1AQ16819 746 aa13.96□□□□□ -0.17
USB1-203ENST00000539737 FBXO48Q5FWF7 155 aa13.96□□□□□ -0.17
USB1-203ENST00000539737 PAGE2BQ5JRK9 111 aa13.96□□□□□ -0.17
USB1-203ENST00000539737 SLC25A25Q6KCM7 469 aa13.96□□□□□ -0.17
USB1-203ENST00000539737 TMEM214Q6NUQ4 689 aaKnown RBP13.96□□□□□ -0.17
USB1-203ENST00000539737 TRPV3Q8NET8 790 aa13.96□□□□□ -0.17
USB1-203ENST00000539737 ESAMQ96AP7 390 aa13.96□□□□□ -0.17
USB1-203ENST00000539737 TM4SF19Q96DZ7 209 aa13.96□□□□□ -0.17
USB1-203ENST00000539737 WDR34Q96EX3 536 aa13.96□□□□□ -0.17
USB1-203ENST00000539737 SEC16BQ96JE7 1060 aa13.96□□□□□ -0.17
USB1-203ENST00000539737 LIME1Q9H400 295 aa13.96□□□□□ -0.17
USB1-203ENST00000539737 ZNF358Q9NW07 568 aa13.96□□□□□ -0.17
USB1-203ENST00000539737 ZFP69BQ9UJL9 534 aa13.96□□□□□ -0.17
USB1-203ENST00000539737 ANGPTL3Q9Y5C1 460 aa13.96□□□□□ -0.17
USB1-203ENST00000539737 SLC22A7Q9Y694 548 aa13.96□□□□□ -0.17
USB1-203ENST00000539737 A8MUA0 341 aa13.95□□□□□ -0.18
USB1-203ENST00000539737 STX16-NPEPL1H3BU86 382 aa13.95□□□□□ -0.18
USB1-203ENST00000539737 STX16O14662 325 aa13.95□□□□□ -0.18
USB1-203ENST00000539737 HS6ST1O60243 411 aa13.95□□□□□ -0.18
USB1-203ENST00000539737 LCMT2O60294 686 aaKnown RBP13.95□□□□□ -0.18
USB1-203ENST00000539737 SLC25A12O75746 678 aa13.95□□□□□ -0.18
USB1-203ENST00000539737 EPB42P16452 691 aa13.95□□□□□ -0.18
USB1-203ENST00000539737 ZNF24P17028 368 aa13.95□□□□□ -0.18
USB1-203ENST00000539737 JAK1P23458 1154 aa13.95□□□□□ -0.18
USB1-203ENST00000539737 GPR85P60893 370 aa13.95□□□□□ -0.18
USB1-203ENST00000539737 IRF8Q02556 426 aa13.95□□□□□ -0.18
USB1-203ENST00000539737 HYAL2Q12891 473 aa13.95□□□□□ -0.18
USB1-203ENST00000539737 LAPTM5Q13571 262 aa13.95□□□□□ -0.18
USB1-203ENST00000539737 RBBP5Q15291 538 aaKnown RBP13.95□□□□□ -0.18
USB1-203ENST00000539737 PCBP2Q15366 365 aaKnown RBP eCLIP13.95□□□□□ -0.185e-19■■■■■ 50.9
USB1-203ENST00000539737 TBCCQ15814 346 aa13.95□□□□□ -0.18
USB1-203ENST00000539737 KRTCAP3Q53RY4 240 aa13.95□□□□□ -0.18
USB1-203ENST00000539737 XKR6Q5GH73 641 aa13.95□□□□□ -0.18
USB1-203ENST00000539737 TMIGD1Q6UXZ0 262 aa13.95□□□□□ -0.18
USB1-203ENST00000539737 ABHD13Q7L211 337 aa13.95□□□□□ -0.18
USB1-203ENST00000539737 TMEM200AQ86VY9 491 aa13.95□□□□□ -0.18
USB1-203ENST00000539737 CYP4X1Q8N118 509 aa13.95□□□□□ -0.18
USB1-203ENST00000539737 GHDCQ8N2G8 530 aa13.95□□□□□ -0.18
USB1-203ENST00000539737 PTGR2Q8N8N7 351 aaPredicted RBP13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms