RNA–Protein interactions for RNA: ENST00000539563.5

LSAMP-207, Transcript of limbic system associated membrane protein, humanhuman

TSL 3 BASIC

Gene LSAMP, Length 8,821 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-207ENST00000539563 SOBPA7XYQ1 873 aa6.24□□□□□ -1.41
LSAMP-207ENST00000539563 SOX1O00570 391 aaPredicted RBP6.24□□□□□ -1.41
LSAMP-207ENST00000539563 VILLO15195 856 aa6.24□□□□□ -1.41
LSAMP-207ENST00000539563 OR12D1P0DN82 309 aa6.24□□□□□ -1.41
LSAMP-207ENST00000539563 CHRM1P11229 460 aaPredicted RBP6.24□□□□□ -1.41
LSAMP-207ENST00000539563 SYN1P17600 705 aa6.24□□□□□ -1.41
LSAMP-207ENST00000539563 AKR1D1P51857 326 aa6.24□□□□□ -1.41
LSAMP-207ENST00000539563 GNG2P59768 71 aa6.24□□□□□ -1.41
LSAMP-207ENST00000539563 PTGR1Q14914 329 aa6.24□□□□□ -1.41
LSAMP-207ENST00000539563 PCBP2Q15366 365 aaKnown RBP eCLIP6.24□□□□□ -1.41
LSAMP-207ENST00000539563 C6orf136Q5SQH8 315 aa6.24□□□□□ -1.41
LSAMP-207ENST00000539563 ANKRD26P1Q6NSI1 321 aa6.24□□□□□ -1.41
LSAMP-207ENST00000539563 UNQ6126/PRO20091Q6UXV3 157 aa6.24□□□□□ -1.41
LSAMP-207ENST00000539563 UTS2BQ765I0 119 aa6.24□□□□□ -1.41
LSAMP-207ENST00000539563 SERINC5Q86VE9 423 aa6.24□□□□□ -1.41
LSAMP-207ENST00000539563 PHTF2Q8N3S3 785 aa6.24□□□□□ -1.41
LSAMP-207ENST00000539563 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.24□□□□□ -1.41
LSAMP-207ENST00000539563 LRRC20Q8TCA0 184 aa6.24□□□□□ -1.41
LSAMP-207ENST00000539563 TMEM203Q969S6 136 aa6.24□□□□□ -1.41
LSAMP-207ENST00000539563 FCRL3Q96P31 734 aaPredicted RBP6.24□□□□□ -1.41
LSAMP-207ENST00000539563 RNF6Q9Y252 685 aa6.24□□□□□ -1.41
LSAMP-207ENST00000539563 MYO9BQ13459 2157 aa6.24□□□□□ -1.41
LSAMP-207ENST00000539563 HYKKA2RU49 373 aa6.23□□□□□ -1.41
LSAMP-207ENST00000539563 NPIPA2E9PIF3 369 aa6.23□□□□□ -1.41
LSAMP-207ENST00000539563 NPIPA3F8WFD2 350 aa6.23□□□□□ -1.41
LSAMP-207ENST00000539563 CCRL2O00421 344 aa6.23□□□□□ -1.41
LSAMP-207ENST00000539563 EIF1AYO14602 144 aaKnown RBP6.23□□□□□ -1.41
LSAMP-207ENST00000539563 DUX1O43812 170 aa6.23□□□□□ -1.41
LSAMP-207ENST00000539563 EEDO75530 441 aaKnown RBP6.23□□□□□ -1.41
LSAMP-207ENST00000539563 RFPL1O75677 317 aa6.23□□□□□ -1.41
LSAMP-207ENST00000539563 INMTO95050 263 aa6.23□□□□□ -1.41
LSAMP-207ENST00000539563 C8orf89P0DMQ9 161 aa6.23□□□□□ -1.41
LSAMP-207ENST00000539563 JUPP14923 745 aa6.23□□□□□ -1.41
LSAMP-207ENST00000539563 UGT2B10P36537 528 aa6.23□□□□□ -1.41
LSAMP-207ENST00000539563 PLEKHN1Q494U1 663 aaPredicted RBP6.23□□□□□ -1.41
LSAMP-207ENST00000539563 STEAP4Q687X5 459 aa6.23□□□□□ -1.41
LSAMP-207ENST00000539563 KCTD18Q6PI47 426 aaPredicted RBP6.23□□□□□ -1.41
LSAMP-207ENST00000539563 TIGD4Q8IY51 512 aa6.23□□□□□ -1.41
LSAMP-207ENST00000539563 PDE7BQ9NP56 450 aa6.23□□□□□ -1.41
LSAMP-207ENST00000539563 NUDT15Q9NV35 164 aa6.23□□□□□ -1.41
LSAMP-207ENST00000539563 SCML1Q9UN30 329 aa6.23□□□□□ -1.41
LSAMP-207ENST00000539563 ZFR2Q9UPR6 939 aaKnown RBP6.23□□□□□ -1.41
LSAMP-207ENST00000539563 SLC7A11Q9UPY5 501 aa6.23□□□□□ -1.41
LSAMP-207ENST00000539563 ECM29Q5VYK3 1845 aa6.23□□□□□ -1.41
LSAMP-207ENST00000539563 FLRT2O43155 660 aa6.23□□□□□ -1.41
LSAMP-207ENST00000539563 RNGTTO60942 597 aaKnown RBP6.23□□□□□ -1.41
LSAMP-207ENST00000539563 OR7A10O76100 309 aa6.23□□□□□ -1.41
LSAMP-207ENST00000539563 PET100P0DJ07 73 aa6.23□□□□□ -1.41
LSAMP-207ENST00000539563 CD1DP15813 335 aa6.23□□□□□ -1.41
LSAMP-207ENST00000539563 GLP1RP43220 463 aa6.23□□□□□ -1.41
LSAMP-207ENST00000539563 VSX2P58304 361 aaPredicted RBP6.23□□□□□ -1.41
LSAMP-207ENST00000539563 RAB8AP61006 207 aa6.23□□□□□ -1.41
LSAMP-207ENST00000539563 ACTA2P62736 377 aa6.23□□□□□ -1.41
LSAMP-207ENST00000539563 ACTG2P63267 376 aa6.23□□□□□ -1.41
LSAMP-207ENST00000539563 OLIG2Q13516 323 aa6.23□□□□□ -1.41
LSAMP-207ENST00000539563 EIF4HQ15056 248 aaKnown RBP6.23□□□□□ -1.41
LSAMP-207ENST00000539563 SIAH1Q8IUQ4 282 aa6.23□□□□□ -1.41
LSAMP-207ENST00000539563 ARHGAP12Q8IWW6 846 aa6.23□□□□□ -1.41
LSAMP-207ENST00000539563 LRRC25Q8N386 305 aaPredicted RBP6.23□□□□□ -1.41
LSAMP-207ENST00000539563 BORCS8Q96FH0 119 aa6.23□□□□□ -1.41
LSAMP-207ENST00000539563 PCYT2Q99447 389 aa6.23□□□□□ -1.41
LSAMP-207ENST00000539563 CCDC106Q9BWC9 280 aa6.23□□□□□ -1.41
LSAMP-207ENST00000539563 NOP16Q9Y3C1 178 aaKnown RBP6.23□□□□□ -1.41
LSAMP-207ENST00000539563 FER1L6Q2WGJ9 1857 aa6.23□□□□□ -1.41
LSAMP-207ENST00000539563 C2orf92A0A1B0GVN3 265 aa6.23□□□□□ -1.41
LSAMP-207ENST00000539563 RASAL1O95294 804 aa6.23□□□□□ -1.41
LSAMP-207ENST00000539563 ASGR2P07307 311 aa6.23□□□□□ -1.41
LSAMP-207ENST00000539563 HLA-EP13747 358 aa6.23□□□□□ -1.41
LSAMP-207ENST00000539563 EIF1AXP47813 144 aaKnown RBP6.23□□□□□ -1.41
LSAMP-207ENST00000539563 NIPAL4Q0D2K0 466 aa6.23□□□□□ -1.41
LSAMP-207ENST00000539563 GLT8D1Q68CQ7 371 aa6.23□□□□□ -1.41
LSAMP-207ENST00000539563 UNC5DQ6UXZ4 953 aa6.23□□□□□ -1.41
LSAMP-207ENST00000539563 RNF111Q6ZNA4 994 aa6.23□□□□□ -1.41
LSAMP-207ENST00000539563 MFSD2AQ8NA29 543 aa6.23□□□□□ -1.41
LSAMP-207ENST00000539563 OR4K1Q8NGD4 311 aa6.23□□□□□ -1.41
LSAMP-207ENST00000539563 LMO3Q8TAP4 145 aa6.23□□□□□ -1.41
LSAMP-207ENST00000539563 THAP4Q8WY91 577 aa6.23□□□□□ -1.41
LSAMP-207ENST00000539563 SLC45A3Q96JT2 553 aa6.23□□□□□ -1.41
LSAMP-207ENST00000539563 ZNF559Q9BR84 538 aa6.23□□□□□ -1.41
LSAMP-207ENST00000539563 TTYH2Q9BSA4 534 aa6.23□□□□□ -1.41
LSAMP-207ENST00000539563 SMG9Q9H0W8 520 aaKnown RBP6.23□□□□□ -1.41
LSAMP-207ENST00000539563 BRF2Q9HAW0 419 aa6.23□□□□□ -1.41
LSAMP-207ENST00000539563 GRXCR1A8MXD5 290 aa6.23□□□□□ -1.41
LSAMP-207ENST00000539563 GJB5O95377 273 aa6.23□□□□□ -1.41
LSAMP-207ENST00000539563 KLF8O95600 359 aaPredicted RBP6.23□□□□□ -1.41
LSAMP-207ENST00000539563 PAK4O96013 591 aaPredicted RBP6.23□□□□□ -1.41
LSAMP-207ENST00000539563 ARSFP54793 590 aa6.23□□□□□ -1.41
LSAMP-207ENST00000539563 GSCP56915 257 aaPredicted RBP6.23□□□□□ -1.41
LSAMP-207ENST00000539563 ZNF404Q494X3 552 aa6.23□□□□□ -1.41
LSAMP-207ENST00000539563 ALG10Q5BKT4 473 aa6.23□□□□□ -1.41
LSAMP-207ENST00000539563 SLC27A4Q6P1M0 643 aa6.23□□□□□ -1.41
LSAMP-207ENST00000539563 MINDY1Q8N5J2 469 aa6.23□□□□□ -1.41
LSAMP-207ENST00000539563 NSMAFQ92636 917 aa6.23□□□□□ -1.41
LSAMP-207ENST00000539563 NEDD4LQ96PU5 975 aa6.23□□□□□ -1.41
LSAMP-207ENST00000539563 TMEM121BQ9BXQ6 578 aaPredicted RBP6.23□□□□□ -1.41
LSAMP-207ENST00000539563 GABRQQ9UN88 632 aa6.23□□□□□ -1.41
LSAMP-207ENST00000539563 TMEM14AQ9Y6G1 99 aa6.23□□□□□ -1.41
LSAMP-207ENST00000539563 H7BY64 318 aa6.23□□□□□ -1.41
LSAMP-207ENST00000539563 SLITRK5O94991 958 aa6.23□□□□□ -1.41
LSAMP-207ENST00000539563 ERP29P30040 261 aaKnown RBP6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms