RNA–Protein interactions for RNA: ENST00000539372.5

TNFRSF1A-212, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,063 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-212ENST00000539372 ITGA10O75578 1167 aa17.76■□□□□ 0.43
TNFRSF1A-212ENST00000539372 HIST1H1TP22492 207 aaPredicted RBP17.76■□□□□ 0.43
TNFRSF1A-212ENST00000539372 SSR2P43308 183 aa17.76■□□□□ 0.43
TNFRSF1A-212ENST00000539372 PCDH1Q08174 1060 aa17.76■□□□□ 0.43
TNFRSF1A-212ENST00000539372 NAA30Q147X3 362 aaPredicted RBP17.76■□□□□ 0.43
TNFRSF1A-212ENST00000539372 ELAVL1Q15717 326 aaKnown RBP17.76■□□□□ 0.43
TNFRSF1A-212ENST00000539372 RNFT1Q5M7Z0 435 aa17.76■□□□□ 0.43
TNFRSF1A-212ENST00000539372 KHDRBS2Q5VWX1 349 aaKnown RBP17.76■□□□□ 0.43
TNFRSF1A-212ENST00000539372 KLC3Q6P597 504 aa17.76■□□□□ 0.43
TNFRSF1A-212ENST00000539372 C16orf47Q6ZP98 133 aaPredicted RBP17.76■□□□□ 0.43
TNFRSF1A-212ENST00000539372 SIAH3Q8IW03 269 aa17.76■□□□□ 0.43
TNFRSF1A-212ENST00000539372 ARMC10Q8N2F6 343 aa17.76■□□□□ 0.43
TNFRSF1A-212ENST00000539372 TMEM132CQ8N3T6 1108 aa17.76■□□□□ 0.43
TNFRSF1A-212ENST00000539372 TMEM156Q8N614 296 aa17.76■□□□□ 0.43
TNFRSF1A-212ENST00000539372 HUS1BQ8NHY5 278 aa17.76■□□□□ 0.43
TNFRSF1A-212ENST00000539372 GPR78Q96P69 363 aa17.76■□□□□ 0.43
TNFRSF1A-212ENST00000539372 CCDC77Q9BR77 488 aa17.76■□□□□ 0.43
TNFRSF1A-212ENST00000539372 CDC42EP4Q9H3Q1 356 aaKnown RBP17.76■□□□□ 0.43
TNFRSF1A-212ENST00000539372 CPSF2Q9P2I0 782 aaKnown RBP17.76■□□□□ 0.43
TNFRSF1A-212ENST00000539372 CLCA3PQ9Y6N3 262 aa17.76■□□□□ 0.43
TNFRSF1A-212ENST00000539372 CDK2AP1O14519 115 aa17.75■□□□□ 0.43
TNFRSF1A-212ENST00000539372 MLYCDO95822 493 aa17.75■□□□□ 0.43
TNFRSF1A-212ENST00000539372 SERPINB1P30740 379 aa17.75■□□□□ 0.43
TNFRSF1A-212ENST00000539372 ALDH18A1P54886 795 aaKnown RBP17.75■□□□□ 0.43
TNFRSF1A-212ENST00000539372 HSF1Q00613 529 aa17.75■□□□□ 0.43
TNFRSF1A-212ENST00000539372 C3AR1Q16581 482 aa17.75■□□□□ 0.43
TNFRSF1A-212ENST00000539372 ZNF800Q2TB10 664 aaPredicted RBP eCLIP17.75■□□□□ 0.43
TNFRSF1A-212ENST00000539372 KRTCAP3Q53RY4 240 aa17.75■□□□□ 0.43
TNFRSF1A-212ENST00000539372 CEP128Q6ZU80 1094 aa17.75■□□□□ 0.43
TNFRSF1A-212ENST00000539372 RELL1Q8IUW5 271 aa17.75■□□□□ 0.43
TNFRSF1A-212ENST00000539372 PLD6Q8N2A8 252 aaKnown RBP17.75■□□□□ 0.43
TNFRSF1A-212ENST00000539372 ZNF321PQ8N8H1 164 aa17.75■□□□□ 0.43
TNFRSF1A-212ENST00000539372 PTPMT1Q8WUK0 201 aaPredicted RBP17.75■□□□□ 0.43
TNFRSF1A-212ENST00000539372 CCDC120Q96HB5 630 aa17.75■□□□□ 0.43
TNFRSF1A-212ENST00000539372 MAGED4Q96JG8 741 aa17.75■□□□□ 0.43
TNFRSF1A-212ENST00000539372 MTERF1Q99551 399 aaKnown RBP17.75■□□□□ 0.43
TNFRSF1A-212ENST00000539372 ACTR8Q9H981 624 aa17.75■□□□□ 0.43
TNFRSF1A-212ENST00000539372 DMRT3Q9NQL9 472 aa17.75■□□□□ 0.43
TNFRSF1A-212ENST00000539372 ZNF358Q9NW07 568 aa17.75■□□□□ 0.43
TNFRSF1A-212ENST00000539372 SUCOQ9UBS9 1254 aaKnown RBP17.75■□□□□ 0.43
TNFRSF1A-212ENST00000539372 TINAGQ9UJW2 476 aa17.75■□□□□ 0.43
TNFRSF1A-212ENST00000539372 SPACA6W5XKT8 324 aa17.75■□□□□ 0.43
TNFRSF1A-212ENST00000539372 KLK8O60259 260 aa17.74■□□□□ 0.43
TNFRSF1A-212ENST00000539372 OR2J2O76002 312 aa17.74■□□□□ 0.43
TNFRSF1A-212ENST00000539372 ZFAND5O76080 213 aa17.74■□□□□ 0.43
TNFRSF1A-212ENST00000539372 SCELO95171 688 aa17.74■□□□□ 0.43
TNFRSF1A-212ENST00000539372 SIX3O95343 332 aaPredicted RBP17.74■□□□□ 0.43
TNFRSF1A-212ENST00000539372 INHBAP08476 426 aa17.74■□□□□ 0.43
TNFRSF1A-212ENST00000539372 ZNF24P17028 368 aa17.74■□□□□ 0.43
TNFRSF1A-212ENST00000539372 TNNI3P19429 210 aa17.74■□□□□ 0.43
TNFRSF1A-212ENST00000539372 CPN2P22792 545 aa17.74■□□□□ 0.43
TNFRSF1A-212ENST00000539372 RFC3P40938 356 aa17.74■□□□□ 0.43
TNFRSF1A-212ENST00000539372 MEOX1P50221 254 aa17.74■□□□□ 0.43
TNFRSF1A-212ENST00000539372 SSR4P51571 173 aa17.74■□□□□ 0.43
TNFRSF1A-212ENST00000539372 RAP1GDS1P52306 607 aa17.74■□□□□ 0.43
TNFRSF1A-212ENST00000539372 CASP6P55212 293 aa17.74■□□□□ 0.43
TNFRSF1A-212ENST00000539372 SLAMF1Q13291 335 aa17.74■□□□□ 0.43
TNFRSF1A-212ENST00000539372 GTF2H2Q13888 395 aa17.74■□□□□ 0.43
TNFRSF1A-212ENST00000539372 DEPDC1Q5TB30 811 aa17.74■□□□□ 0.43
TNFRSF1A-212ENST00000539372 OR4C11Q6IEV9 310 aa17.74■□□□□ 0.43
TNFRSF1A-212ENST00000539372 GTF2H2CQ6P1K8 395 aa17.74■□□□□ 0.43
TNFRSF1A-212ENST00000539372 GOLGA7Q7Z5G4 137 aa17.74■□□□□ 0.43
TNFRSF1A-212ENST00000539372 SULF2Q8IWU5 870 aa17.74■□□□□ 0.43
TNFRSF1A-212ENST00000539372 OR4N5Q8IXE1 308 aa17.74■□□□□ 0.43
TNFRSF1A-212ENST00000539372 CYP4Z2PQ8N1L4 340 aa17.74■□□□□ 0.43
TNFRSF1A-212ENST00000539372 UHMK1Q8TAS1 419 aaKnown RBP17.74■□□□□ 0.43
TNFRSF1A-212ENST00000539372 SLC44A1Q8WWI5 657 aa17.74■□□□□ 0.43
TNFRSF1A-212ENST00000539372 ITLN2Q8WWU7 325 aaPredicted RBP17.74■□□□□ 0.43
TNFRSF1A-212ENST00000539372 DAZLQ92904 295 aaKnown RBP17.74■□□□□ 0.43
TNFRSF1A-212ENST00000539372 ANKRD9Q96BM1 317 aaPredicted RBP17.74■□□□□ 0.43
TNFRSF1A-212ENST00000539372 FMO2Q99518 471 aa17.74■□□□□ 0.43
TNFRSF1A-212ENST00000539372 OR8D2Q9GZM6 311 aa17.74■□□□□ 0.43
TNFRSF1A-212ENST00000539372 VTI1BQ9UEU0 232 aa17.74■□□□□ 0.43
TNFRSF1A-212ENST00000539372 ADGRE2Q9UHX3 823 aa17.74■□□□□ 0.43
TNFRSF1A-212ENST00000539372 KLF13Q9Y2Y9 288 aaPredicted RBP17.74■□□□□ 0.43
TNFRSF1A-212ENST00000539372 MYO7BQ6PIF6 2116 aa17.74■□□□□ 0.43
TNFRSF1A-212ENST00000539372 CCDC189A1A4V9 331 aa17.73■□□□□ 0.43
TNFRSF1A-212ENST00000539372 TMEM200CA6NKL6 621 aa17.73■□□□□ 0.43
TNFRSF1A-212ENST00000539372 C17orf105B2RV13 164 aa17.73■□□□□ 0.43
TNFRSF1A-212ENST00000539372 PRSS44E7EML9 344 aa17.73■□□□□ 0.43
TNFRSF1A-212ENST00000539372 WWP2O00308 870 aa17.73■□□□□ 0.43
TNFRSF1A-212ENST00000539372 ASNA1O43681 348 aa17.73■□□□□ 0.43
TNFRSF1A-212ENST00000539372 PIK3CBP42338 1070 aa17.73■□□□□ 0.43
TNFRSF1A-212ENST00000539372 GPR85P60893 370 aa17.73■□□□□ 0.43
TNFRSF1A-212ENST00000539372 RPS13P62277 151 aaKnown RBP17.73■□□□□ 0.43
TNFRSF1A-212ENST00000539372 PCBP2Q15366 365 aaKnown RBP eCLIP17.73■□□□□ 0.431e-6■■■■□ 21.6
TNFRSF1A-212ENST00000539372 CPSF6Q16630 551 aaKnown RBP eCLIP17.73■□□□□ 0.43
TNFRSF1A-212ENST00000539372 TECRLQ5HYJ1 363 aa17.73■□□□□ 0.43
TNFRSF1A-212ENST00000539372 LIPJQ5W064 366 aa17.73■□□□□ 0.43
TNFRSF1A-212ENST00000539372 HSDL2Q6YN16 418 aa17.73■□□□□ 0.43
TNFRSF1A-212ENST00000539372 MDGA2Q7Z553 956 aa17.73■□□□□ 0.43
TNFRSF1A-212ENST00000539372 SPPL2CQ8IUH8 684 aa17.73■□□□□ 0.43
TNFRSF1A-212ENST00000539372 MNS1Q8NEH6 495 aa17.73■□□□□ 0.43
TNFRSF1A-212ENST00000539372 OR14A16Q8NHC5 309 aa17.73■□□□□ 0.43
TNFRSF1A-212ENST00000539372 RGMAQ96B86 450 aa17.73■□□□□ 0.43
TNFRSF1A-212ENST00000539372 PAFAH2Q99487 392 aa17.73■□□□□ 0.43
TNFRSF1A-212ENST00000539372 FUT8Q9BYC5 575 aa17.73■□□□□ 0.43
TNFRSF1A-212ENST00000539372 IPPKQ9H8X2 491 aa17.73■□□□□ 0.43
TNFRSF1A-212ENST00000539372 YARS2Q9Y2Z4 477 aaKnown RBP17.73■□□□□ 0.43
TNFRSF1A-212ENST00000539372 RNF11Q9Y3C5 154 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms