RNA–Protein interactions for RNA: ENST00000538970.5

VAMP1-206, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best)

Gene VAMP1, Length 567 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-206ENST00000538970 GPR22Q99680 433 aa11.62□□□□□ -0.55
VAMP1-206ENST00000538970 RBBP8Q99708 897 aa11.62□□□□□ -0.55
VAMP1-206ENST00000538970 NAPGQ99747 312 aaPredicted RBP11.62□□□□□ -0.55
VAMP1-206ENST00000538970 TP63Q9H3D4 680 aaPredicted RBP11.62□□□□□ -0.55
VAMP1-206ENST00000538970 PRDM7Q9NQW5 492 aa11.62□□□□□ -0.55
VAMP1-206ENST00000538970 HPF1Q9NWY4 346 aa11.62□□□□□ -0.55
VAMP1-206ENST00000538970 MYOTQ9UBF9 498 aa11.62□□□□□ -0.55
VAMP1-206ENST00000538970 CLCA3PQ9Y6N3 262 aa11.62□□□□□ -0.55
VAMP1-206ENST00000538970 A0A0G2JMM0 328 aa11.61□□□□□ -0.55
VAMP1-206ENST00000538970 A0A1W2PPB8 328 aa11.61□□□□□ -0.55
VAMP1-206ENST00000538970 A0A1W2PRS3 328 aa11.61□□□□□ -0.55
VAMP1-206ENST00000538970 KIR3DP1A8MWS1 328 aa11.61□□□□□ -0.55
VAMP1-206ENST00000538970 WWP2O00308 870 aa11.61□□□□□ -0.55
VAMP1-206ENST00000538970 FANCGO15287 622 aa11.61□□□□□ -0.55
VAMP1-206ENST00000538970 IFNA16P05015 189 aa11.61□□□□□ -0.55
VAMP1-206ENST00000538970 STMN1P16949 149 aa11.61□□□□□ -0.55
VAMP1-206ENST00000538970 IGFBP2P18065 325 aa11.61□□□□□ -0.55
VAMP1-206ENST00000538970 SOX3P41225 446 aa11.61□□□□□ -0.55
VAMP1-206ENST00000538970 PAFAH1B1P43034 410 aa11.61□□□□□ -0.55
VAMP1-206ENST00000538970 KCNC1P48547 511 aa11.61□□□□□ -0.55
VAMP1-206ENST00000538970 HK2P52789 917 aa11.61□□□□□ -0.55
VAMP1-206ENST00000538970 TGM3Q08188 693 aa11.61□□□□□ -0.55
VAMP1-206ENST00000538970 E2F2Q14209 437 aa11.61□□□□□ -0.55
VAMP1-206ENST00000538970 EFTUD2Q15029 972 aaKnown RBP eCLIP11.61□□□□□ -0.55
VAMP1-206ENST00000538970 IL20RBQ6UXL0 311 aa11.61□□□□□ -0.55
VAMP1-206ENST00000538970 HSDL2Q6YN16 418 aa11.61□□□□□ -0.55
VAMP1-206ENST00000538970 MEX3BQ6ZN04 569 aaKnown RBP11.61□□□□□ -0.55
VAMP1-206ENST00000538970 ZNF793Q6ZN11 406 aa11.61□□□□□ -0.55
VAMP1-206ENST00000538970 CEP128Q6ZU80 1094 aa11.61□□□□□ -0.55
VAMP1-206ENST00000538970 UBE3DQ7Z6J8 389 aa11.61□□□□□ -0.55
VAMP1-206ENST00000538970 RPRMLQ8N4K4 120 aa11.61□□□□□ -0.55
VAMP1-206ENST00000538970 ZNF321PQ8N8H1 164 aa11.61□□□□□ -0.55
VAMP1-206ENST00000538970 BBOF1Q8ND07 529 aa11.61□□□□□ -0.55
VAMP1-206ENST00000538970 MORN4Q8NDC4 146 aa11.61□□□□□ -0.55
VAMP1-206ENST00000538970 OR2M7Q8NG81 312 aa11.61□□□□□ -0.55
VAMP1-206ENST00000538970 PYROXD1Q8WU10 500 aa11.61□□□□□ -0.55
VAMP1-206ENST00000538970 CHTF18Q8WVB6 975 aa11.61□□□□□ -0.55
VAMP1-206ENST00000538970 CDKL2Q92772 493 aa11.61□□□□□ -0.55
VAMP1-206ENST00000538970 DAZLQ92904 295 aaKnown RBP11.61□□□□□ -0.55
VAMP1-206ENST00000538970 KIAA1191Q96A73 305 aa11.61□□□□□ -0.55
VAMP1-206ENST00000538970 UBXN10Q96LJ8 280 aa11.61□□□□□ -0.55
VAMP1-206ENST00000538970 KCNC2Q96PR1 638 aa11.61□□□□□ -0.55
VAMP1-206ENST00000538970 CPNE1Q99829 537 aa11.61□□□□□ -0.55
VAMP1-206ENST00000538970 MS4A8Q9BY19 250 aa11.61□□□□□ -0.55
VAMP1-206ENST00000538970 ALOXE3Q9BYJ1 711 aa11.61□□□□□ -0.55
VAMP1-206ENST00000538970 ROGDIQ9GZN7 287 aa11.61□□□□□ -0.55
VAMP1-206ENST00000538970 ZDHHC11Q9H8X9 412 aa11.61□□□□□ -0.55
VAMP1-206ENST00000538970 GRPEL1Q9HAV7 217 aa11.61□□□□□ -0.55
VAMP1-206ENST00000538970 LYRM4Q9HD34 91 aa11.61□□□□□ -0.55
VAMP1-206ENST00000538970 SAYSD1Q9NPB0 183 aa11.61□□□□□ -0.55
VAMP1-206ENST00000538970 CD274Q9NZQ7 290 aa11.61□□□□□ -0.55
VAMP1-206ENST00000538970 TXNDC16Q9P2K2 825 aa11.61□□□□□ -0.55
VAMP1-206ENST00000538970 VTI1BQ9UEU0 232 aa11.61□□□□□ -0.55
VAMP1-206ENST00000538970 PTBP2Q9UKA9 531 aaKnown RBP11.61□□□□□ -0.55
VAMP1-206ENST00000538970 CACNA1CQ13936 2221 aa11.6□□□□□ -0.55
VAMP1-206ENST00000538970 MYOCOSA0A1B0GUC4 107 aa11.6□□□□□ -0.55
VAMP1-206ENST00000538970 TCRBV9S1A1TA0A576 114 aa11.6□□□□□ -0.55
VAMP1-206ENST00000538970 FAM159BA6NKW6 160 aa11.6□□□□□ -0.55
VAMP1-206ENST00000538970 FAM166BA8MTA8 275 aa11.6□□□□□ -0.55
VAMP1-206ENST00000538970 C17orf105B2RV13 164 aa11.6□□□□□ -0.55
VAMP1-206ENST00000538970 ACOT7O00154 380 aa11.6□□□□□ -0.55
VAMP1-206ENST00000538970 CCNT2O60583 730 aaKnown RBP11.6□□□□□ -0.55
VAMP1-206ENST00000538970 PDE9AO76083 593 aa11.6□□□□□ -0.55
VAMP1-206ENST00000538970 SCELO95171 688 aa11.6□□□□□ -0.55
VAMP1-206ENST00000538970 C1QAP02745 245 aa11.6□□□□□ -0.55
VAMP1-206ENST00000538970 S100BP04271 92 aaPredicted RBP11.6□□□□□ -0.55
VAMP1-206ENST00000538970 GP5P40197 560 aa11.6□□□□□ -0.55
VAMP1-206ENST00000538970 MSH2P43246 934 aa11.6□□□□□ -0.55
VAMP1-206ENST00000538970 RAB10P61026 200 aa11.6□□□□□ -0.55
VAMP1-206ENST00000538970 PPIAP62937 165 aaKnown RBP11.6□□□□□ -0.55
VAMP1-206ENST00000538970 MRPS25P82663 173 aaKnown RBP11.6□□□□□ -0.55
VAMP1-206ENST00000538970 IRF8Q02556 426 aa11.6□□□□□ -0.55
VAMP1-206ENST00000538970 TLE4Q04727 773 aa11.6□□□□□ -0.55
VAMP1-206ENST00000538970 STX4Q12846 297 aa11.6□□□□□ -0.55
VAMP1-206ENST00000538970 CHIT1Q13231 466 aa11.6□□□□□ -0.55
VAMP1-206ENST00000538970 LAPTM5Q13571 262 aa11.6□□□□□ -0.55
VAMP1-206ENST00000538970 SERTAD2Q14140 314 aa11.6□□□□□ -0.55
VAMP1-206ENST00000538970 TBCCQ15814 346 aa11.6□□□□□ -0.55
VAMP1-206ENST00000538970 EMC4Q5J8M3 183 aa11.6□□□□□ -0.55
VAMP1-206ENST00000538970 PAGE2BQ5JRK9 111 aa11.6□□□□□ -0.55
VAMP1-206ENST00000538970 TMEM211Q6ICI0 200 aa11.6□□□□□ -0.55
VAMP1-206ENST00000538970 RTL4Q6ZR62 310 aa11.6□□□□□ -0.55
VAMP1-206ENST00000538970 LRRC70Q7Z2Q7 622 aa11.6□□□□□ -0.55
VAMP1-206ENST00000538970 OR8K3Q8NH51 312 aa11.6□□□□□ -0.55
VAMP1-206ENST00000538970 SLC2A12Q8TD20 617 aa11.6□□□□□ -0.55
VAMP1-206ENST00000538970 ZNF473Q8WTR7 871 aaKnown RBP11.6□□□□□ -0.55
VAMP1-206ENST00000538970 ASB5Q8WWX0 329 aa11.6□□□□□ -0.55
VAMP1-206ENST00000538970 SREK1Q8WXA9 508 aaKnown RBP11.6□□□□□ -0.55
VAMP1-206ENST00000538970 EXT2Q93063 718 aa11.6□□□□□ -0.55
VAMP1-206ENST00000538970 MAPKAP1Q9BPZ7 522 aa11.6□□□□□ -0.55
VAMP1-206ENST00000538970 TTTY12Q9BZ98 90 aa11.6□□□□□ -0.55
VAMP1-206ENST00000538970 CD244Q9BZW8 370 aa11.6□□□□□ -0.55
VAMP1-206ENST00000538970 OR8D2Q9GZM6 311 aa11.6□□□□□ -0.55
VAMP1-206ENST00000538970 DEFB127Q9H1M4 99 aa11.6□□□□□ -0.55
VAMP1-206ENST00000538970 DPH5Q9H2P9 285 aa11.6□□□□□ -0.55
VAMP1-206ENST00000538970 RNF112Q9ULX5 631 aa11.6□□□□□ -0.55
VAMP1-206ENST00000538970 RNF6Q9Y252 685 aa11.6□□□□□ -0.55
VAMP1-206ENST00000538970 G3V3Y1 287 aa11.59□□□□□ -0.55
VAMP1-206ENST00000538970 RTCAO00442 366 aaKnown RBP11.59□□□□□ -0.55
VAMP1-206ENST00000538970 EIF3HO15372 352 aaKnown RBP eCLIP11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms