RNA–Protein interactions for RNA: ENST00000538862.6

CDCA3-207, Transcript of cell division cycle associated 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDCA3, Length 1,943 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-207ENST00000538862 A3GALT2U3KPV4 340 aa13.9□□□□□ -0.18
CDCA3-207ENST00000538862 M0R082 166 aa13.89□□□□□ -0.19
CDCA3-207ENST00000538862 PI15O43692 258 aa13.89□□□□□ -0.19
CDCA3-207ENST00000538862 AIREO43918 545 aa13.89□□□□□ -0.19
CDCA3-207ENST00000538862 C21orf33P30042 268 aaPredicted RBP13.89□□□□□ -0.19
CDCA3-207ENST00000538862 CLK1P49759 484 aaKnown RBP13.89□□□□□ -0.19
CDCA3-207ENST00000538862 HMGA2P52926 109 aa13.89□□□□□ -0.19
CDCA3-207ENST00000538862 RPS3AP61247 264 aaKnown RBP13.89□□□□□ -0.19
CDCA3-207ENST00000538862 SPIBQ01892 262 aa13.89□□□□□ -0.19
CDCA3-207ENST00000538862 EEF1A2Q05639 463 aaKnown RBP13.89□□□□□ -0.19
CDCA3-207ENST00000538862 SLBPQ14493 270 aaKnown RBP eCLIP13.89□□□□□ -0.19
CDCA3-207ENST00000538862 EIF4HQ15056 248 aaKnown RBP13.89□□□□□ -0.19
CDCA3-207ENST00000538862 ZNF630Q2M218 657 aaPredicted RBP13.89□□□□□ -0.19
CDCA3-207ENST00000538862 LY6G5CQ5SRR4 150 aa13.89□□□□□ -0.19
CDCA3-207ENST00000538862 CATSPEREQ5SY80 951 aa13.89□□□□□ -0.19
CDCA3-207ENST00000538862 FAM71E1Q6IPT2 247 aa13.89□□□□□ -0.19
CDCA3-207ENST00000538862 TUBA3EQ6PEY2 450 aa13.89□□□□□ -0.19
CDCA3-207ENST00000538862 ANGPTL8Q6UXH0 198 aa13.89□□□□□ -0.19
CDCA3-207ENST00000538862 UNC5DQ6UXZ4 953 aa13.89□□□□□ -0.19
CDCA3-207ENST00000538862 ZNF852Q6ZMS4 543 aa13.89□□□□□ -0.19
CDCA3-207ENST00000538862 SLC30A8Q8IWU4 369 aa13.89□□□□□ -0.19
CDCA3-207ENST00000538862 OR4K1Q8NGD4 311 aa13.89□□□□□ -0.19
CDCA3-207ENST00000538862 C16orf78Q8WTQ4 265 aa13.89□□□□□ -0.19
CDCA3-207ENST00000538862 CYB5D2Q8WUJ1 264 aa13.89□□□□□ -0.19
CDCA3-207ENST00000538862 GEMIN6Q8WXD5 167 aaKnown RBP13.89□□□□□ -0.19
CDCA3-207ENST00000538862 SLC35B4Q969S0 331 aa13.89□□□□□ -0.19
CDCA3-207ENST00000538862 LINC00597Q9H2U6 94 aa13.89□□□□□ -0.19
CDCA3-207ENST00000538862 DSN1Q9H410 356 aa13.89□□□□□ -0.19
CDCA3-207ENST00000538862 ITM2CQ9NQX7 267 aa13.89□□□□□ -0.19
CDCA3-207ENST00000538862 MARK1Q9P0L2 795 aa13.89□□□□□ -0.19
CDCA3-207ENST00000538862 ENOPH1Q9UHY7 261 aa13.89□□□□□ -0.19
CDCA3-207ENST00000538862 HCN4Q9Y3Q4 1203 aa13.89□□□□□ -0.19
CDCA3-207ENST00000538862 TSC22D4Q9Y3Q8 395 aa13.89□□□□□ -0.19
CDCA3-207ENST00000538862 KIF26AQ9ULI4 1882 aaPredicted RBP13.89□□□□□ -0.19
CDCA3-207ENST00000538862 PIPSLA2A3N6 862 aa13.88□□□□□ -0.19
CDCA3-207ENST00000538862 KRT75O95678 551 aa13.88□□□□□ -0.19
CDCA3-207ENST00000538862 OPN1SWP03999 348 aa13.88□□□□□ -0.19
CDCA3-207ENST00000538862 GABRB1P18505 474 aa13.88□□□□□ -0.19
CDCA3-207ENST00000538862 CD72P21854 359 aa13.88□□□□□ -0.19
CDCA3-207ENST00000538862 GDI1P31150 447 aa13.88□□□□□ -0.19
CDCA3-207ENST00000538862 SLC19A1P41440 591 aa13.88□□□□□ -0.19
CDCA3-207ENST00000538862 CTSKP43235 329 aa13.88□□□□□ -0.19
CDCA3-207ENST00000538862 CDK6Q00534 326 aa13.88□□□□□ -0.19
CDCA3-207ENST00000538862 C2orf80Q0P641 193 aa13.88□□□□□ -0.19
CDCA3-207ENST00000538862 TIGD6Q17RP2 521 aa13.88□□□□□ -0.19
CDCA3-207ENST00000538862 Q6ZPB1 254 aaPredicted RBP13.88□□□□□ -0.19
CDCA3-207ENST00000538862 USP43Q70EL4 1123 aa13.88□□□□□ -0.19
CDCA3-207ENST00000538862 ZNF605Q86T29 641 aa13.88□□□□□ -0.19
CDCA3-207ENST00000538862 LACC1Q8IV20 430 aa13.88□□□□□ -0.19
CDCA3-207ENST00000538862 CCDC103Q8IW40 242 aa13.88□□□□□ -0.19
CDCA3-207ENST00000538862 LGI4Q8N135 537 aa13.88□□□□□ -0.19
CDCA3-207ENST00000538862 METTL4Q8N3J2 472 aa13.88□□□□□ -0.19
CDCA3-207ENST00000538862 TMEM105Q8N8V8 129 aa13.88□□□□□ -0.19
CDCA3-207ENST00000538862 OR9A1PQ8NGU1 263 aa13.88□□□□□ -0.19
CDCA3-207ENST00000538862 MCFD2Q8NI22 146 aa13.88□□□□□ -0.19
CDCA3-207ENST00000538862 NFKBIDQ8NI38 313 aa13.88□□□□□ -0.19
CDCA3-207ENST00000538862 ZFYVE19Q96K21 471 aa13.88□□□□□ -0.19
CDCA3-207ENST00000538862 COL21A1Q96P44 957 aa13.88□□□□□ -0.19
CDCA3-207ENST00000538862 TRMT61BQ9BVS5 477 aaKnown RBP13.88□□□□□ -0.19
CDCA3-207ENST00000538862 ZNF556Q9HAH1 456 aa13.88□□□□□ -0.19
CDCA3-207ENST00000538862 TRPV4Q9HBA0 871 aa13.88□□□□□ -0.19
CDCA3-207ENST00000538862 TAS2R9Q9NYW1 312 aa13.88□□□□□ -0.19
CDCA3-207ENST00000538862 GULP1Q9UBP9 304 aa13.88□□□□□ -0.19
CDCA3-207ENST00000538862 PAIP2BQ9ULR5 123 aaKnown RBP13.88□□□□□ -0.19
CDCA3-207ENST00000538862 AVPR2P30518 371 aa13.88□□□□□ -0.19
CDCA3-207ENST00000538862 PIK3CBP42338 1070 aa13.88□□□□□ -0.19
CDCA3-207ENST00000538862 LIMS1P48059 325 aa13.88□□□□□ -0.19
CDCA3-207ENST00000538862 CDH12P55289 794 aa13.88□□□□□ -0.19
CDCA3-207ENST00000538862 SYT16Q17RD7 645 aa13.88□□□□□ -0.19
CDCA3-207ENST00000538862 MPEG1Q2M385 716 aa13.88□□□□□ -0.19
CDCA3-207ENST00000538862 EXOC3L2Q2M3D2 409 aa13.88□□□□□ -0.19
CDCA3-207ENST00000538862 ZNF404Q494X3 552 aa13.88□□□□□ -0.19
CDCA3-207ENST00000538862 AGAP7PQ5VUJ5 663 aa13.88□□□□□ -0.19
CDCA3-207ENST00000538862 NXPE4Q6UWF7 544 aa13.88□□□□□ -0.19
CDCA3-207ENST00000538862 PLEKHG7Q6ZR37 379 aa13.88□□□□□ -0.19
CDCA3-207ENST00000538862 SLC46A3Q7Z3Q1 461 aa13.88□□□□□ -0.19
CDCA3-207ENST00000538862 ARMC8Q8IUR7 673 aa13.88□□□□□ -0.19
CDCA3-207ENST00000538862 LRRC56Q8IYG6 542 aaPredicted RBP13.88□□□□□ -0.19
CDCA3-207ENST00000538862 SLC5A11Q8WWX8 675 aa13.88□□□□□ -0.19
CDCA3-207ENST00000538862 SORCS1Q8WY21 1168 aa13.88□□□□□ -0.19
CDCA3-207ENST00000538862 PROX1Q92786 737 aa13.88□□□□□ -0.19
CDCA3-207ENST00000538862 UBE2E3Q969T4 207 aa13.88□□□□□ -0.19
CDCA3-207ENST00000538862 OTUB2Q96DC9 234 aa13.88□□□□□ -0.19
CDCA3-207ENST00000538862 CRELD1Q96HD1 420 aa13.88□□□□□ -0.19
CDCA3-207ENST00000538862 PIP5K1AQ99755 562 aa13.88□□□□□ -0.19
CDCA3-207ENST00000538862 ZCCHC2Q9C0B9 1178 aaKnown RBP13.88□□□□□ -0.19
CDCA3-207ENST00000538862 TBC1D17Q9HA65 648 aa13.88□□□□□ -0.19
CDCA3-207ENST00000538862 RLIMQ9NVW2 624 aa13.88□□□□□ -0.19
CDCA3-207ENST00000538862 ZNF226Q9NYT6 803 aa13.88□□□□□ -0.19
CDCA3-207ENST00000538862 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.88□□□□□ -0.19
CDCA3-207ENST00000538862 ZNF451Q9Y4E5 1061 aa13.88□□□□□ -0.19
CDCA3-207ENST00000538862 CACNA1HO95180 2353 aa13.87□□□□□ -0.19
CDCA3-207ENST00000538862 ISPDA4D126 451 aa13.87□□□□□ -0.19
CDCA3-207ENST00000538862 ARRDC5A6NEK1 342 aa13.87□□□□□ -0.19
CDCA3-207ENST00000538862 PRAMEF25A6NGN4 478 aa13.87□□□□□ -0.19
CDCA3-207ENST00000538862 METTL15A6NJ78 407 aa13.87□□□□□ -0.19
CDCA3-207ENST00000538862 TAF4O00268 1085 aa13.87□□□□□ -0.19
CDCA3-207ENST00000538862 ADAM23O75077 832 aa13.87□□□□□ -0.19
CDCA3-207ENST00000538862 KLHL18O94889 574 aa13.87□□□□□ -0.19
CDCA3-207ENST00000538862 TGFB1P01137 390 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms