RNA–Protein interactions for RNA: ENST00000538475.5

USP28-207, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 1,081 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-207ENST00000538475 DGKQP52824 942 aa6.41□□□□□ -1.38
USP28-207ENST00000538475 ACLYP53396 1101 aa6.41□□□□□ -1.38
USP28-207ENST00000538475 IL2P60568 153 aa6.41□□□□□ -1.38
USP28-207ENST00000538475 OSTNP61366 133 aa6.41□□□□□ -1.38
USP28-207ENST00000538475 TIAL1Q01085 375 aaKnown RBP eCLIP6.41□□□□□ -1.38
USP28-207ENST00000538475 SP2Q02086 613 aa6.41□□□□□ -1.38
USP28-207ENST00000538475 DHODHQ02127 395 aa6.41□□□□□ -1.38
USP28-207ENST00000538475 VEPH1Q14D04 833 aa6.41□□□□□ -1.38
USP28-207ENST00000538475 SPHARQ15513 63 aa6.41□□□□□ -1.38
USP28-207ENST00000538475 SMAD1Q15797 465 aaKnown RBP6.41□□□□□ -1.38
USP28-207ENST00000538475 SSX1Q16384 188 aa6.41□□□□□ -1.38
USP28-207ENST00000538475 DUSP6Q16828 381 aa6.41□□□□□ -1.38
USP28-207ENST00000538475 FAM174BQ3ZCQ3 159 aa6.41□□□□□ -1.38
USP28-207ENST00000538475 KLHL22Q53GT1 634 aa6.41□□□□□ -1.38
USP28-207ENST00000538475 PYDC2Q56P42 97 aa6.41□□□□□ -1.38
USP28-207ENST00000538475 ZNF789Q5FWF6 425 aa6.41□□□□□ -1.38
USP28-207ENST00000538475 C3orf38Q5JPI3 329 aa6.41□□□□□ -1.38
USP28-207ENST00000538475 FAM182AQ5T1J6 154 aa6.41□□□□□ -1.38
USP28-207ENST00000538475 SFRP5Q5T4F7 317 aa6.41□□□□□ -1.38
USP28-207ENST00000538475 MANEALQ5VSG8 457 aa6.41□□□□□ -1.38
USP28-207ENST00000538475 FAM171A1Q5VUB5 890 aa6.41□□□□□ -1.38
USP28-207ENST00000538475 RETSATQ6NUM9 610 aa6.41□□□□□ -1.38
USP28-207ENST00000538475 TMEM81Q6P7N7 255 aa6.41□□□□□ -1.38
USP28-207ENST00000538475 KLHL17Q6TDP4 642 aa6.41□□□□□ -1.38
USP28-207ENST00000538475 IL27RAQ6UWB1 636 aa6.41□□□□□ -1.38
USP28-207ENST00000538475 ZNF730Q6ZMV8 503 aa6.41□□□□□ -1.38
USP28-207ENST00000538475 MACC1Q6ZN28 852 aa6.41□□□□□ -1.38
USP28-207ENST00000538475 DBX2Q6ZNG2 339 aa6.41□□□□□ -1.38
USP28-207ENST00000538475 ANKS3Q6ZW76 656 aa6.41□□□□□ -1.38
USP28-207ENST00000538475 HSD17B13Q7Z5P4 300 aaPredicted RBP6.41□□□□□ -1.38
USP28-207ENST00000538475 FGD2Q7Z6J4 655 aa6.41□□□□□ -1.38
USP28-207ENST00000538475 KRTAP19-1Q8IUB9 90 aa6.41□□□□□ -1.38
USP28-207ENST00000538475 SLC30A8Q8IWU4 369 aa6.41□□□□□ -1.38
USP28-207ENST00000538475 ARHGAP12Q8IWW6 846 aa6.41□□□□□ -1.38
USP28-207ENST00000538475 TRIM48Q8IWZ4 208 aa6.41□□□□□ -1.38
USP28-207ENST00000538475 TEX26Q8N6G2 289 aa6.41□□□□□ -1.38
USP28-207ENST00000538475 C7orf31Q8N865 590 aa6.41□□□□□ -1.38
USP28-207ENST00000538475 NAT16Q8N8M0 369 aa6.41□□□□□ -1.38
USP28-207ENST00000538475 ZNF557Q8N988 423 aaPredicted RBP6.41□□□□□ -1.38
USP28-207ENST00000538475 SRFBP1Q8NEF9 429 aaKnown RBP6.41□□□□□ -1.38
USP28-207ENST00000538475 FAM46DQ8NEK8 389 aa6.41□□□□□ -1.38
USP28-207ENST00000538475 B3GNT7Q8NFL0 401 aa6.41□□□□□ -1.38
USP28-207ENST00000538475 NLGN4YQ8NFZ3 816 aaPredicted RBP6.41□□□□□ -1.38
USP28-207ENST00000538475 OR4L1Q8NH43 312 aa6.41□□□□□ -1.38
USP28-207ENST00000538475 SPATA22Q8NHS9 363 aa6.41□□□□□ -1.38
USP28-207ENST00000538475 WDR36Q8NI36 951 aaKnown RBP6.41□□□□□ -1.38
USP28-207ENST00000538475 UBTD2Q8WUN7 234 aa6.41□□□□□ -1.38
USP28-207ENST00000538475 ASB11Q8WXH4 323 aa6.41□□□□□ -1.38
USP28-207ENST00000538475 ST8SIA4Q92187 359 aa6.41□□□□□ -1.38
USP28-207ENST00000538475 UCN3Q969E3 161 aa6.41□□□□□ -1.38
USP28-207ENST00000538475 MYLPFQ96A32 169 aa6.41□□□□□ -1.38
USP28-207ENST00000538475 SCMH1Q96GD3 660 aa6.41□□□□□ -1.38
USP28-207ENST00000538475 MSANTD3Q96H12 275 aa6.41□□□□□ -1.38
USP28-207ENST00000538475 C7orf34Q96L11 122 aa6.41□□□□□ -1.38
USP28-207ENST00000538475 SENP8Q96LD8 212 aa6.41□□□□□ -1.38
USP28-207ENST00000538475 KLHL15Q96M94 604 aa6.41□□□□□ -1.38
USP28-207ENST00000538475 KCTD7Q96MP8 289 aa6.41□□□□□ -1.38
USP28-207ENST00000538475 TEPSINQ96N21 525 aa6.41□□□□□ -1.38
USP28-207ENST00000538475 ERMAPQ96PL5 475 aaPredicted RBP6.41□□□□□ -1.38
USP28-207ENST00000538475 TTPALQ9BTX7 342 aa6.41□□□□□ -1.38
USP28-207ENST00000538475 NTMT1Q9BV86 223 aa6.41□□□□□ -1.38
USP28-207ENST00000538475 ZNF416Q9BWM5 594 aa6.41□□□□□ -1.38
USP28-207ENST00000538475 BARHL1Q9BZE3 327 aa6.41□□□□□ -1.38
USP28-207ENST00000538475 TRIM8Q9BZR9 551 aa6.41□□□□□ -1.38
USP28-207ENST00000538475 CD244Q9BZW8 370 aa6.41□□□□□ -1.38
USP28-207ENST00000538475 ZNF436Q9C0F3 470 aaPredicted RBP6.41□□□□□ -1.38
USP28-207ENST00000538475 PPIL3Q9H2H8 161 aaKnown RBP6.41□□□□□ -1.38
USP28-207ENST00000538475 MIXL1Q9H2W2 232 aa6.41□□□□□ -1.38
USP28-207ENST00000538475 GAREM1Q9H706 876 aa6.41□□□□□ -1.38
USP28-207ENST00000538475 MINDY3Q9H8M7 445 aa6.41□□□□□ -1.38
USP28-207ENST00000538475 HEXA-AS1Q9H8Q6 139 aa6.41□□□□□ -1.38
USP28-207ENST00000538475 SLC25A19Q9HC21 320 aa6.41□□□□□ -1.38
USP28-207ENST00000538475 SPON1Q9HCB6 807 aa6.41□□□□□ -1.38
USP28-207ENST00000538475 HHATLQ9HCP6 504 aa6.41□□□□□ -1.38
USP28-207ENST00000538475 RASSF1Q9NS23 344 aa6.41□□□□□ -1.38
USP28-207ENST00000538475 ZNF226Q9NYT6 803 aa6.41□□□□□ -1.38
USP28-207ENST00000538475 SCP2D1Q9UJQ7 156 aa6.41□□□□□ -1.38
USP28-207ENST00000538475 ZNF225Q9UK10 706 aa6.41□□□□□ -1.38
USP28-207ENST00000538475 TMCC3Q9ULS5 477 aa6.41□□□□□ -1.38
USP28-207ENST00000538475 DUSP12Q9UNI6 340 aa6.41□□□□□ -1.38
USP28-207ENST00000538475 LIPT1Q9Y234 373 aa6.41□□□□□ -1.38
USP28-207ENST00000538475 RPL36Q9Y3U8 105 aaKnown RBP6.41□□□□□ -1.38
USP28-207ENST00000538475 POLR3HQ9Y535 204 aaPredicted RBP6.41□□□□□ -1.38
USP28-207ENST00000538475 PTGDR2Q9Y5Y4 395 aa6.41□□□□□ -1.38
USP28-207ENST00000538475 U3KQV3 271 aa6.41□□□□□ -1.38
USP28-207ENST00000538475 CKAP5Q14008 2032 aa6.41□□□□□ -1.38
USP28-207ENST00000538475 WDR90Q96KV7 1748 aa6.4□□□□□ -1.38
USP28-207ENST00000538475 A0A1W2PQL4 384 aaPredicted RBP6.4□□□□□ -1.38
USP28-207ENST00000538475 ANKDD1BA6NHY2 528 aa6.4□□□□□ -1.38
USP28-207ENST00000538475 ZAR1LA6NP61 321 aa6.4□□□□□ -1.38
USP28-207ENST00000538475 C9JVG2 144 aa6.4□□□□□ -1.38
USP28-207ENST00000538475 PRSS44E7EML9 344 aa6.4□□□□□ -1.38
USP28-207ENST00000538475 FAM72CH0Y354 149 aa6.4□□□□□ -1.38
USP28-207ENST00000538475 PPP6CO00743 305 aa6.4□□□□□ -1.38
USP28-207ENST00000538475 TSPAN4O14817 238 aa6.4□□□□□ -1.38
USP28-207ENST00000538475 INPPL1O15357 1258 aa6.4□□□□□ -1.38
USP28-207ENST00000538475 FABP7O15540 132 aa6.4□□□□□ -1.38
USP28-207ENST00000538475 SUV39H1O43463 412 aa6.4□□□□□ -1.38
USP28-207ENST00000538475 LDB2O43679 373 aa6.4□□□□□ -1.38
USP28-207ENST00000538475 CHP2O43745 196 aa6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms