RNA–Protein interactions for RNA: ENST00000538470.2

DDB1-212, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 858 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-212ENST00000538470 RAB10P61026 200 aa8.04□□□□□ -1.12
DDB1-212ENST00000538470 MRPS25P82663 173 aaKnown RBP8.04□□□□□ -1.12
DDB1-212ENST00000538470 IRF8Q02556 426 aa8.04□□□□□ -1.12
DDB1-212ENST00000538470 CAV1Q03135 178 aa8.04□□□□□ -1.12
DDB1-212ENST00000538470 PCDH1Q08174 1060 aa8.04□□□□□ -1.12
DDB1-212ENST00000538470 STX4Q12846 297 aa8.04□□□□□ -1.12
DDB1-212ENST00000538470 DOC2AQ14183 400 aa8.04□□□□□ -1.12
DDB1-212ENST00000538470 TMEM211Q6ICI0 200 aa8.04□□□□□ -1.12
DDB1-212ENST00000538470 PAOXQ6QHF9 649 aa8.04□□□□□ -1.12
DDB1-212ENST00000538470 HSDL2Q6YN16 418 aa8.04□□□□□ -1.12
DDB1-212ENST00000538470 GK5Q6ZS86 529 aa8.04□□□□□ -1.12
DDB1-212ENST00000538470 CAPN12Q6ZSI9 719 aa8.04□□□□□ -1.12
DDB1-212ENST00000538470 CD163Q86VB7 1156 aa8.04□□□□□ -1.12
DDB1-212ENST00000538470 TMEM52Q8NDY8 209 aa8.04□□□□□ -1.12
DDB1-212ENST00000538470 CA5BP1Q8WTZ4 195 aa8.04□□□□□ -1.12
DDB1-212ENST00000538470 ASB5Q8WWX0 329 aa8.04□□□□□ -1.12
DDB1-212ENST00000538470 ASB15Q8WXK1 588 aa8.04□□□□□ -1.12
DDB1-212ENST00000538470 UBXN10Q96LJ8 280 aa8.04□□□□□ -1.12
DDB1-212ENST00000538470 TREX2Q9BQ50 279 aaPredicted RBP8.04□□□□□ -1.12
DDB1-212ENST00000538470 ERP44Q9BS26 406 aa8.04□□□□□ -1.12
DDB1-212ENST00000538470 TBCDQ9BTW9 1192 aa8.04□□□□□ -1.12
DDB1-212ENST00000538470 MS4A8Q9BY19 250 aa8.04□□□□□ -1.12
DDB1-212ENST00000538470 TP63Q9H3D4 680 aaPredicted RBP8.04□□□□□ -1.12
DDB1-212ENST00000538470 CAB39LQ9H9S4 337 aa8.04□□□□□ -1.12
DDB1-212ENST00000538470 SAYSD1Q9NPB0 183 aa8.04□□□□□ -1.12
DDB1-212ENST00000538470 CD274Q9NZQ7 290 aa8.04□□□□□ -1.12
DDB1-212ENST00000538470 MYOTQ9UBF9 498 aa8.04□□□□□ -1.12
DDB1-212ENST00000538470 VTI1BQ9UEU0 232 aa8.04□□□□□ -1.12
DDB1-212ENST00000538470 PTBP2Q9UKA9 531 aaKnown RBP8.04□□□□□ -1.12
DDB1-212ENST00000538470 RNF112Q9ULX5 631 aa8.04□□□□□ -1.12
DDB1-212ENST00000538470 ERVK-11Q9UQG0 969 aa8.04□□□□□ -1.12
DDB1-212ENST00000538470 ADGRG4Q8IZF6 3080 aa8.04□□□□□ -1.12
DDB1-212ENST00000538470 CSMD2Q7Z408 3487 aa8.04□□□□□ -1.12
DDB1-212ENST00000538470 ARHGAP21Q5T5U3 1957 aa8.04□□□□□ -1.12
DDB1-212ENST00000538470 EXPH5Q8NEV8 1989 aa8.04□□□□□ -1.12
DDB1-212ENST00000538470 C2CD3Q4AC94 2353 aa8.04□□□□□ -1.12
DDB1-212ENST00000538470 ANKHD1Q8IWZ3 2542 aaKnown RBP8.03□□□□□ -1.12
DDB1-212ENST00000538470 A0A1B0GTH9 108 aa8.03□□□□□ -1.12
DDB1-212ENST00000538470 CXorf49A8MYA2 514 aaPredicted RBP8.03□□□□□ -1.12
DDB1-212ENST00000538470 C19orf84I3L1E1 186 aa8.03□□□□□ -1.12
DDB1-212ENST00000538470 HS6ST1O60243 411 aa8.03□□□□□ -1.12
DDB1-212ENST00000538470 PRKNO60260 465 aaPredicted RBP8.03□□□□□ -1.12
DDB1-212ENST00000538470 CDC40O60508 579 aaKnown RBP eCLIP8.03□□□□□ -1.12
DDB1-212ENST00000538470 CCNT2O60583 730 aaKnown RBP8.03□□□□□ -1.12
DDB1-212ENST00000538470 PRAMEF4O60810 478 aa8.03□□□□□ -1.12
DDB1-212ENST00000538470 KERAO60938 352 aa8.03□□□□□ -1.12
DDB1-212ENST00000538470 OR2J2O76002 312 aa8.03□□□□□ -1.12
DDB1-212ENST00000538470 URI1O94763 535 aaPredicted RBP8.03□□□□□ -1.12
DDB1-212ENST00000538470 C1QAP02745 245 aa8.03□□□□□ -1.12
DDB1-212ENST00000538470 SNRPB2P08579 225 aaKnown RBP8.03□□□□□ -1.12
DDB1-212ENST00000538470 COX7A2P14406 83 aa8.03□□□□□ -1.12
DDB1-212ENST00000538470 EPORP19235 508 aa8.03□□□□□ -1.12
DDB1-212ENST00000538470 CAPN3P20807 821 aa8.03□□□□□ -1.12
DDB1-212ENST00000538470 HIST1H1TP22492 207 aaPredicted RBP8.03□□□□□ -1.12
DDB1-212ENST00000538470 CRABP2P29373 138 aa8.03□□□□□ -1.12
DDB1-212ENST00000538470 PPP2R1BP30154 601 aa8.03□□□□□ -1.12
DDB1-212ENST00000538470 MSH2P43246 934 aa8.03□□□□□ -1.12
DDB1-212ENST00000538470 HK2P52789 917 aa8.03□□□□□ -1.12
DDB1-212ENST00000538470 ARFIP1P53367 373 aa8.03□□□□□ -1.12
DDB1-212ENST00000538470 GPR85P60893 370 aa8.03□□□□□ -1.12
DDB1-212ENST00000538470 C2orf54Q08AI8 447 aa8.03□□□□□ -1.12
DDB1-212ENST00000538470 BIKQ13323 160 aa8.03□□□□□ -1.12
DDB1-212ENST00000538470 BMPR2Q13873 1038 aa8.03□□□□□ -1.12
DDB1-212ENST00000538470 OR4D1Q15615 310 aa8.03□□□□□ -1.12
DDB1-212ENST00000538470 GRTP1Q5TC63 336 aa8.03□□□□□ -1.12
DDB1-212ENST00000538470 NDUFAF5Q5TEU4 345 aa8.03□□□□□ -1.12
DDB1-212ENST00000538470 PRAMEF9Q5VWM5 478 aa8.03□□□□□ -1.12
DDB1-212ENST00000538470 ADNP2Q6IQ32 1131 aa8.03□□□□□ -1.12
DDB1-212ENST00000538470 MED27Q6P2C8 311 aa8.03□□□□□ -1.12
DDB1-212ENST00000538470 OPN5Q6U736 354 aa8.03□□□□□ -1.12
DDB1-212ENST00000538470 RTL4Q6ZR62 310 aa8.03□□□□□ -1.12
DDB1-212ENST00000538470 MDGA2Q7Z553 956 aa8.03□□□□□ -1.12
DDB1-212ENST00000538470 CLNKQ7Z7G1 428 aa8.03□□□□□ -1.12
DDB1-212ENST00000538470 TBC1D1Q86TI0 1168 aaPredicted RBP8.03□□□□□ -1.12
DDB1-212ENST00000538470 SLC22A16Q86VW1 577 aa8.03□□□□□ -1.12
DDB1-212ENST00000538470 LAS2Q8IYD9 372 aa8.03□□□□□ -1.12
DDB1-212ENST00000538470 SPATA6LQ8N4H0 392 aa8.03□□□□□ -1.12
DDB1-212ENST00000538470 ACOT4Q8N9L9 421 aa8.03□□□□□ -1.12
DDB1-212ENST00000538470 GOLM1Q8NBJ4 401 aa8.03□□□□□ -1.12
DDB1-212ENST00000538470 OR2M7Q8NG81 312 aa8.03□□□□□ -1.12
DDB1-212ENST00000538470 OR5L2Q8NGL0 311 aa8.03□□□□□ -1.12
DDB1-212ENST00000538470 STAG3L4Q8TBR4 150 aa8.03□□□□□ -1.12
DDB1-212ENST00000538470 SLC2A12Q8TD20 617 aa8.03□□□□□ -1.12
DDB1-212ENST00000538470 ZNF473Q8WTR7 871 aaKnown RBP8.03□□□□□ -1.12
DDB1-212ENST00000538470 PTPMT1Q8WUK0 201 aaPredicted RBP8.03□□□□□ -1.12
DDB1-212ENST00000538470 CHTF18Q8WVB6 975 aa8.03□□□□□ -1.12
DDB1-212ENST00000538470 SDCCAG3Q96C92 435 aa8.03□□□□□ -1.12
DDB1-212ENST00000538470 ART5Q96L15 291 aa8.03□□□□□ -1.12
DDB1-212ENST00000538470 SGCZQ96LD1 299 aa8.03□□□□□ -1.12
DDB1-212ENST00000538470 RASL10BQ96S79 203 aa8.03□□□□□ -1.12
DDB1-212ENST00000538470 FAM173AQ9BQD7 235 aa8.03□□□□□ -1.12
DDB1-212ENST00000538470 CENPKQ9BS16 269 aa8.03□□□□□ -1.12
DDB1-212ENST00000538470 ALOXE3Q9BYJ1 711 aa8.03□□□□□ -1.12
DDB1-212ENST00000538470 CD244Q9BZW8 370 aa8.03□□□□□ -1.12
DDB1-212ENST00000538470 ENKD1Q9H0I2 346 aa8.03□□□□□ -1.12
DDB1-212ENST00000538470 RAB17Q9H0T7 212 aa8.03□□□□□ -1.12
DDB1-212ENST00000538470 DPH5Q9H2P9 285 aa8.03□□□□□ -1.12
DDB1-212ENST00000538470 ZDHHC11Q9H8X9 412 aa8.03□□□□□ -1.12
DDB1-212ENST00000538470 NMRAL1Q9HBL8 299 aa8.03□□□□□ -1.12
DDB1-212ENST00000538470 PRDM7Q9NQW5 492 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms