RNA–Protein interactions for RNA: ENST00000538136.1

MSH6-209, Transcript of mutS homolog 6, humanhuman

TSL 2 BASIC

Gene MSH6, Length 4,055 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-209ENST00000538136 PGRMC2O15173 223 aa6.86□□□□□ -1.31
MSH6-209ENST00000538136 DNAJB6O75190 326 aa6.86□□□□□ -1.31
MSH6-209ENST00000538136 NUDT17P0C025 328 aa6.86□□□□□ -1.31
MSH6-209ENST00000538136 SSTR4P31391 388 aa6.86□□□□□ -1.31
MSH6-209ENST00000538136 GABRA3P34903 492 aa6.86□□□□□ -1.31
MSH6-209ENST00000538136 FOLH1Q04609 750 aa6.86□□□□□ -1.31
MSH6-209ENST00000538136 KLC1Q07866 573 aa6.86□□□□□ -1.31
MSH6-209ENST00000538136 EPS8Q12929 822 aa6.86□□□□□ -1.31
MSH6-209ENST00000538136 NAB1Q13506 487 aa6.86□□□□□ -1.31
MSH6-209ENST00000538136 PCM1Q15154 2024 aa6.86□□□□□ -1.31
MSH6-209ENST00000538136 LSM12Q3MHD2 195 aaKnown RBP6.86□□□□□ -1.31
MSH6-209ENST00000538136 OR9A2Q8NGT5 310 aa6.86□□□□□ -1.31
MSH6-209ENST00000538136 TBC1D20Q96BZ9 403 aa6.86□□□□□ -1.31
MSH6-209ENST00000538136 SLC25A36Q96CQ1 311 aa6.86□□□□□ -1.31
MSH6-209ENST00000538136 OXSMQ9NWU1 459 aa6.86□□□□□ -1.31
MSH6-209ENST00000538136 FARSAQ9Y285 508 aaKnown RBP6.86□□□□□ -1.31
MSH6-209ENST00000538136 ATG4BQ9Y4P1 393 aa6.86□□□□□ -1.31
MSH6-209ENST00000538136 DMXL2Q8TDJ6 3036 aa6.86□□□□□ -1.31
MSH6-209ENST00000538136 USP9XQ93008 2570 aaPredicted RBP6.86□□□□□ -1.31
MSH6-209ENST00000538136 SLCO2B1O94956 709 aa6.86□□□□□ -1.31
MSH6-209ENST00000538136 CELA2AP08217 269 aa6.86□□□□□ -1.31
MSH6-209ENST00000538136 CPMP14384 443 aa6.86□□□□□ -1.31
MSH6-209ENST00000538136 ACPPP15309 386 aa6.86□□□□□ -1.31
MSH6-209ENST00000538136 CSNK2A2P19784 350 aaPredicted RBP6.86□□□□□ -1.31
MSH6-209ENST00000538136 MAPK1P28482 360 aa6.86□□□□□ -1.31
MSH6-209ENST00000538136 CCKBRP32239 447 aa6.86□□□□□ -1.31
MSH6-209ENST00000538136 MTTPP55157 894 aa6.86□□□□□ -1.31
MSH6-209ENST00000538136 MLLT10P55197 1068 aa6.86□□□□□ -1.31
MSH6-209ENST00000538136 ZIC1Q15915 447 aa6.86□□□□□ -1.31
MSH6-209ENST00000538136 SFT2D3Q587I9 215 aa6.86□□□□□ -1.31
MSH6-209ENST00000538136 FGD3Q5JSP0 725 aa6.86□□□□□ -1.31
MSH6-209ENST00000538136 AGBL2Q5U5Z8 902 aa6.86□□□□□ -1.31
MSH6-209ENST00000538136 BMP8AQ7Z5Y6 402 aa6.86□□□□□ -1.31
MSH6-209ENST00000538136 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP6.86□□□□□ -1.31
MSH6-209ENST00000538136 RIT1Q92963 219 aa6.86□□□□□ -1.31
MSH6-209ENST00000538136 UCN3Q969E3 161 aa6.86□□□□□ -1.31
MSH6-209ENST00000538136 TCTN2Q96GX1 697 aa6.86□□□□□ -1.31
MSH6-209ENST00000538136 RSRC1Q96IZ7 334 aaKnown RBP6.86□□□□□ -1.31
MSH6-209ENST00000538136 PPP3R2Q96LZ3 170 aa6.86□□□□□ -1.31
MSH6-209ENST00000538136 OR4K3Q96R72 315 aa6.86□□□□□ -1.31
MSH6-209ENST00000538136 P2RY12Q9H244 342 aa6.86□□□□□ -1.31
MSH6-209ENST00000538136 POLR1BQ9H9Y6 1135 aa6.86□□□□□ -1.31
MSH6-209ENST00000538136 SLC9A8Q9Y2E8 581 aa6.86□□□□□ -1.31
MSH6-209ENST00000538136 CHD6Q8TD26 2715 aa6.86□□□□□ -1.31
MSH6-209ENST00000538136 DOPEY1Q5JWR5 2465 aa6.86□□□□□ -1.31
MSH6-209ENST00000538136 C17orf113A0A1B0GUU1 675 aa6.86□□□□□ -1.31
MSH6-209ENST00000538136 MRASO14807 208 aa6.86□□□□□ -1.31
MSH6-209ENST00000538136 P2RX6O15547 441 aa6.86□□□□□ -1.31
MSH6-209ENST00000538136 ALPPP05187 535 aa6.86□□□□□ -1.31
MSH6-209ENST00000538136 COL19A1Q14993 1142 aa6.86□□□□□ -1.31
MSH6-209ENST00000538136 TCTE1Q5JU00 501 aa6.86□□□□□ -1.31
MSH6-209ENST00000538136 SLC29A4Q7RTT9 530 aa6.86□□□□□ -1.31
MSH6-209ENST00000538136 IQCHQ86VS3 1027 aa6.86□□□□□ -1.31
MSH6-209ENST00000538136 P3H2Q8IVL5 708 aa6.86□□□□□ -1.31
MSH6-209ENST00000538136 ADGRF3Q8IZF5 1079 aa6.86□□□□□ -1.31
MSH6-209ENST00000538136 OR4K14Q8NGD5 310 aa6.86□□□□□ -1.31
MSH6-209ENST00000538136 OR6C4Q8NGE1 309 aa6.86□□□□□ -1.31
MSH6-209ENST00000538136 ACMSDQ8TDX5 336 aa6.86□□□□□ -1.31
MSH6-209ENST00000538136 PGM2Q96G03 612 aa6.86□□□□□ -1.31
MSH6-209ENST00000538136 ACTL8Q9H568 366 aa6.86□□□□□ -1.31
MSH6-209ENST00000538136 MRM3Q9HC36 420 aaKnown RBP6.86□□□□□ -1.31
MSH6-209ENST00000538136 ADPRHL2Q9NX46 363 aa6.86□□□□□ -1.31
MSH6-209ENST00000538136 FAM32AQ9Y421 112 aaKnown RBP6.86□□□□□ -1.31
MSH6-209ENST00000538136 YKT6O15498 198 aa6.85□□□□□ -1.31
MSH6-209ENST00000538136 UROSP10746 265 aa6.85□□□□□ -1.31
MSH6-209ENST00000538136 SFTPDP35247 375 aa6.85□□□□□ -1.31
MSH6-209ENST00000538136 CAPZA2P47755 286 aa6.85□□□□□ -1.31
MSH6-209ENST00000538136 RPS15AP62244 130 aaKnown RBP6.85□□□□□ -1.31
MSH6-209ENST00000538136 HOXC5Q00444 222 aa6.85□□□□□ -1.31
MSH6-209ENST00000538136 INSM1Q01101 510 aaPredicted RBP6.85□□□□□ -1.31
MSH6-209ENST00000538136 DNASE1L3Q13609 305 aa6.85□□□□□ -1.31
MSH6-209ENST00000538136 GTDC1Q4AE62 458 aa6.85□□□□□ -1.31
MSH6-209ENST00000538136 OR5M1Q8NGP8 315 aa6.85□□□□□ -1.31
MSH6-209ENST00000538136 OR52J3Q8NH60 311 aa6.85□□□□□ -1.31
MSH6-209ENST00000538136 GRHL3Q8TE85 626 aa6.85□□□□□ -1.31
MSH6-209ENST00000538136 RCN3Q96D15 328 aa6.85□□□□□ -1.31
MSH6-209ENST00000538136 SPDL1Q96EA4 605 aa6.85□□□□□ -1.31
MSH6-209ENST00000538136 KCNC2Q96PR1 638 aa6.85□□□□□ -1.31
MSH6-209ENST00000538136 DOHHQ9BU89 302 aa6.85□□□□□ -1.31
MSH6-209ENST00000538136 TMEM184CQ9NVA4 438 aa6.85□□□□□ -1.31
MSH6-209ENST00000538136 ENTPD2Q9Y5L3 495 aa6.85□□□□□ -1.31
MSH6-209ENST00000538136 TICRRQ7Z2Z1 1910 aa6.85□□□□□ -1.31
MSH6-209ENST00000538136 PLXNA3P51805 1871 aa6.85□□□□□ -1.31
MSH6-209ENST00000538136 RNF103-CHMP3A0A140T963 221 aa6.85□□□□□ -1.31
MSH6-209ENST00000538136 CCT8L1PA6NM43 557 aa6.85□□□□□ -1.31
MSH6-209ENST00000538136 STX16-NPEPL1H3BU86 382 aa6.85□□□□□ -1.31
MSH6-209ENST00000538136 CHUKO15111 745 aa6.85□□□□□ -1.31
MSH6-209ENST00000538136 TAPBPO15533 448 aa6.85□□□□□ -1.31
MSH6-209ENST00000538136 FRS3O43559 492 aa6.85□□□□□ -1.31
MSH6-209ENST00000538136 AHCYP23526 432 aa6.85□□□□□ -1.31
MSH6-209ENST00000538136 MPIP34949 423 aa6.85□□□□□ -1.31
MSH6-209ENST00000538136 HSD17B2P37059 387 aa6.85□□□□□ -1.31
MSH6-209ENST00000538136 ATP1A4Q13733 1029 aa6.85□□□□□ -1.31
MSH6-209ENST00000538136 C1orf146Q5VVC0 180 aa6.85□□□□□ -1.31
MSH6-209ENST00000538136 NOXRED1Q6NXP6 359 aa6.85□□□□□ -1.31
MSH6-209ENST00000538136 DEFB107AQ8IZN7 70 aa6.85□□□□□ -1.31
MSH6-209ENST00000538136 OR5D16Q8NGK9 328 aa6.85□□□□□ -1.31
MSH6-209ENST00000538136 OR1N1Q8NGS0 311 aa6.85□□□□□ -1.31
MSH6-209ENST00000538136 OR2L8Q8NGY9 312 aa6.85□□□□□ -1.31
MSH6-209ENST00000538136 ASB12Q8WXK4 309 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms