RNA–Protein interactions for RNA: ENST00000538077.2

LINC00346-201, long intergenic non-protein coding RNA 346, humanhuman

BASIC

Gene LINC00346, Length 6,265 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346-201ENST00000538077 VAMP1P23763 118 aa10.76□□□□□ -0.69
LINC00346-201ENST00000538077 HOXD13P35453 343 aa10.76□□□□□ -0.69
LINC00346-201ENST00000538077 GMPRP36959 345 aa10.76□□□□□ -0.69
LINC00346-201ENST00000538077 CLDN2P57739 230 aa10.76□□□□□ -0.69
LINC00346-201ENST00000538077 GNG2P59768 71 aa10.76□□□□□ -0.69
LINC00346-201ENST00000538077 SHC2P98077 582 aa10.76□□□□□ -0.69
LINC00346-201ENST00000538077 GRIK2Q13002 908 aa10.76□□□□□ -0.69
LINC00346-201ENST00000538077 SLC35G1Q2M3R5 365 aa10.76□□□□□ -0.69
LINC00346-201ENST00000538077 BIRC7Q96CA5 298 aa10.76□□□□□ -0.69
LINC00346-201ENST00000538077 TSGA13Q96PP4 275 aa10.76□□□□□ -0.69
LINC00346-201ENST00000538077 STRA6Q9BX79 667 aa10.76□□□□□ -0.69
LINC00346-201ENST00000538077 FN3KQ9H479 309 aa10.76□□□□□ -0.69
LINC00346-201ENST00000538077 ZNF701Q9NV72 531 aaPredicted RBP10.76□□□□□ -0.69
LINC00346-201ENST00000538077 EURLQ9NYK6 297 aa10.76□□□□□ -0.69
LINC00346-201ENST00000538077 DNMT3AQ9Y6K1 912 aaPredicted RBP10.76□□□□□ -0.69
LINC00346-201ENST00000538077 TP53I11O14683 189 aa10.76□□□□□ -0.69
LINC00346-201ENST00000538077 AURKAO14965 403 aa10.76□□□□□ -0.69
LINC00346-201ENST00000538077 SLC16A5O15375 505 aa10.76□□□□□ -0.69
LINC00346-201ENST00000538077 RAB36O95755 333 aa10.76□□□□□ -0.69
LINC00346-201ENST00000538077 SRCP12931 536 aa10.76□□□□□ -0.69
LINC00346-201ENST00000538077 SLC36A4Q6YBV0 504 aa10.76□□□□□ -0.69
LINC00346-201ENST00000538077 SERINC5Q86VE9 423 aa10.76□□□□□ -0.69
LINC00346-201ENST00000538077 DNAJB8Q8NHS0 232 aa10.76□□□□□ -0.69
LINC00346-201ENST00000538077 AURKBQ96GD4 344 aaPredicted RBP10.76□□□□□ -0.69
LINC00346-201ENST00000538077 ANKRA2Q9H9E1 313 aa10.76□□□□□ -0.69
LINC00346-201ENST00000538077 KCNK12Q9HB15 430 aa10.76□□□□□ -0.69
LINC00346-201ENST00000538077 ZDHHC18Q9NUE0 388 aa10.76□□□□□ -0.69
LINC00346-201ENST00000538077 MS4A12Q9NXJ0 267 aa10.76□□□□□ -0.69
LINC00346-201ENST00000538077 OARD1Q9Y530 152 aa10.76□□□□□ -0.69
LINC00346-201ENST00000538077 NID2Q14112 1375 aa10.76□□□□□ -0.69
LINC00346-201ENST00000538077 SRPRAP08240 638 aaKnown RBP10.76□□□□□ -0.69
LINC00346-201ENST00000538077 H2BFMP0C1H6 154 aa10.76□□□□□ -0.69
LINC00346-201ENST00000538077 GSTM3P21266 225 aa10.76□□□□□ -0.69
LINC00346-201ENST00000538077 EEFSECP57772 596 aaKnown RBP10.76□□□□□ -0.69
LINC00346-201ENST00000538077 OGFRL1Q5TC84 451 aaPredicted RBP10.76□□□□□ -0.69
LINC00346-201ENST00000538077 SLC25A25Q6KCM7 469 aa10.76□□□□□ -0.69
LINC00346-201ENST00000538077 TMPPEQ6ZT21 453 aa10.76□□□□□ -0.69
LINC00346-201ENST00000538077 CCDC36Q8IYA8 594 aa10.76□□□□□ -0.69
LINC00346-201ENST00000538077 OR8K5Q8NH50 307 aa10.76□□□□□ -0.69
LINC00346-201ENST00000538077 CEP76Q8TAP6 659 aa10.76□□□□□ -0.69
LINC00346-201ENST00000538077 ERMAPQ96PL5 475 aaPredicted RBP10.76□□□□□ -0.69
LINC00346-201ENST00000538077 DPH2Q9BQC3 489 aaPredicted RBP10.76□□□□□ -0.69
LINC00346-201ENST00000538077 TRIM36Q9NQ86 728 aa10.76□□□□□ -0.69
LINC00346-201ENST00000538077 PADI2Q9Y2J8 665 aa10.76□□□□□ -0.69
LINC00346-201ENST00000538077 TEX13DA0A0J9YY54 714 aaPredicted RBP10.76□□□□□ -0.69
LINC00346-201ENST00000538077 SMCO3A2RU48 225 aa10.76□□□□□ -0.69
LINC00346-201ENST00000538077 ZNF84P51523 738 aa10.76□□□□□ -0.69
LINC00346-201ENST00000538077 OR4C11Q6IEV9 310 aa10.76□□□□□ -0.69
LINC00346-201ENST00000538077 ZC3H14Q6PJT7 736 aaKnown RBP10.76□□□□□ -0.69
LINC00346-201ENST00000538077 IGFN1Q86VF2 1251 aa10.76□□□□□ -0.69
LINC00346-201ENST00000538077 TOMM5Q8N4H5 51 aa10.76□□□□□ -0.69
LINC00346-201ENST00000538077 OR14L1PQ8NHC6 308 aa10.76□□□□□ -0.69
LINC00346-201ENST00000538077 DIO2Q92813 273 aa10.76□□□□□ -0.69
LINC00346-201ENST00000538077 TRIM43Q96BQ3 446 aaPredicted RBP10.76□□□□□ -0.69
LINC00346-201ENST00000538077 PKP2Q99959 881 aa10.76□□□□□ -0.69
LINC00346-201ENST00000538077 TMEM185BQ9H7F4 350 aa10.76□□□□□ -0.69
LINC00346-201ENST00000538077 TMEM165Q9HC07 324 aa10.76□□□□□ -0.69
LINC00346-201ENST00000538077 SRA1Q9HD15 236 aaKnown RBP10.76□□□□□ -0.69
LINC00346-201ENST00000538077 LAMB4A4D0S4 1761 aa10.76□□□□□ -0.69
LINC00346-201ENST00000538077 NTSR1P30989 418 aa10.75□□□□□ -0.69
LINC00346-201ENST00000538077 KCNC1P48547 511 aa10.75□□□□□ -0.69
LINC00346-201ENST00000538077 CLLU1OSQ5K130 101 aa10.75□□□□□ -0.69
LINC00346-201ENST00000538077 EPGNQ6UW88 154 aa10.75□□□□□ -0.69
LINC00346-201ENST00000538077 RAB11FIP2Q7L804 512 aa10.75□□□□□ -0.69
LINC00346-201ENST00000538077 ZNF554Q86TJ5 538 aa10.75□□□□□ -0.69
LINC00346-201ENST00000538077 SLITRK4Q8IW52 837 aa10.75□□□□□ -0.69
LINC00346-201ENST00000538077 OR51G2Q8NGK0 314 aa10.75□□□□□ -0.69
LINC00346-201ENST00000538077 SHKBP1Q8TBC3 707 aa10.75□□□□□ -0.69
LINC00346-201ENST00000538077 LRRC46Q96FV0 321 aa10.75□□□□□ -0.69
LINC00346-201ENST00000538077 ZNF471Q9BX82 626 aaPredicted RBP10.75□□□□□ -0.69
LINC00346-201ENST00000538077 ZNF350Q9GZX5 532 aa10.75□□□□□ -0.69
LINC00346-201ENST00000538077 MRM3Q9HC36 420 aaKnown RBP10.75□□□□□ -0.69
LINC00346-201ENST00000538077 RARRES3Q9UL19 164 aa10.75□□□□□ -0.69
LINC00346-201ENST00000538077 ALS2Q96Q42 1657 aa10.75□□□□□ -0.69
LINC00346-201ENST00000538077 SRRM3A6NNA2 597 aaPredicted RBP10.75□□□□□ -0.69
LINC00346-201ENST00000538077 HNRNPA1P09651 372 aaKnown RBP eCLIP10.75□□□□□ -0.69
LINC00346-201ENST00000538077 BMP1P13497 986 aa10.75□□□□□ -0.69
LINC00346-201ENST00000538077 ADAM17P78536 824 aa10.75□□□□□ -0.69
LINC00346-201ENST00000538077 TRAPPC6BQ86SZ2 158 aa10.75□□□□□ -0.69
LINC00346-201ENST00000538077 PAQR7Q86WK9 346 aa10.75□□□□□ -0.69
LINC00346-201ENST00000538077 CASTOR1Q8WTX7 329 aa10.75□□□□□ -0.69
LINC00346-201ENST00000538077 KIAA1191Q96A73 305 aa10.75□□□□□ -0.69
LINC00346-201ENST00000538077 G6PC3Q9BUM1 346 aa10.75□□□□□ -0.69
LINC00346-201ENST00000538077 B4GALT7Q9UBV7 327 aa10.75□□□□□ -0.69
LINC00346-201ENST00000538077 ACSL6Q9UKU0 697 aa10.75□□□□□ -0.69
LINC00346-201ENST00000538077 TAS1R1Q7RTX1 841 aa10.75□□□□□ -0.69
LINC00346-201ENST00000538077 FAM86B1Q8N7N1 296 aa10.75□□□□□ -0.69
LINC00346-201ENST00000538077 TMCO6Q96DC7 493 aa10.75□□□□□ -0.69
LINC00346-201ENST00000538077 TMEM80Q96HE8 168 aa10.75□□□□□ -0.69
LINC00346-201ENST00000538077 GPR22Q99680 433 aa10.75□□□□□ -0.69
LINC00346-201ENST00000538077 TTYH1Q9H313 450 aaPredicted RBP10.75□□□□□ -0.69
LINC00346-201ENST00000538077 HPF1Q9NWY4 346 aa10.75□□□□□ -0.69
LINC00346-201ENST00000538077 MYEF2Q9P2K5 600 aaKnown RBP10.75□□□□□ -0.69
LINC00346-201ENST00000538077 TEX264Q9Y6I9 313 aa10.75□□□□□ -0.69
LINC00346-201ENST00000538077 FXYD6-FXYD2A0A087WZ82 144 aa10.75□□□□□ -0.69
LINC00346-201ENST00000538077 UNC119BA6NIH7 251 aa10.75□□□□□ -0.69
LINC00346-201ENST00000538077 VEGFDO43915 354 aa10.75□□□□□ -0.69
LINC00346-201ENST00000538077 KDM4BO94953 1096 aa10.75□□□□□ -0.69
LINC00346-201ENST00000538077 SOX9P48436 509 aa10.75□□□□□ -0.69
LINC00346-201ENST00000538077 DEFB103AP81534 67 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms