RNA–Protein interactions for RNA: ENST00000537934.5

SEMA4D-221, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 2,710 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-221ENST00000537934 MATN3O15232 486 aa10.88□□□□□ -0.67
SEMA4D-221ENST00000537934 FGF18O76093 207 aa10.88□□□□□ -0.67
SEMA4D-221ENST00000537934 OR5F1O95221 314 aa10.88□□□□□ -0.67
SEMA4D-221ENST00000537934 SLC2A3P11169 496 aa10.88□□□□□ -0.67
SEMA4D-221ENST00000537934 HLA-EP13747 358 aa10.88□□□□□ -0.67
SEMA4D-221ENST00000537934 SOX3P41225 446 aa10.88□□□□□ -0.67
SEMA4D-221ENST00000537934 ARSDP51689 593 aa10.88□□□□□ -0.67
SEMA4D-221ENST00000537934 WNT3AP56704 352 aa10.88□□□□□ -0.67
SEMA4D-221ENST00000537934 ERVFC1P60507 584 aa10.88□□□□□ -0.67
SEMA4D-221ENST00000537934 PUDPQ08623 228 aa10.88□□□□□ -0.67
SEMA4D-221ENST00000537934 CDH18Q13634 790 aa10.88□□□□□ -0.67
SEMA4D-221ENST00000537934 TSNQ15631 228 aaKnown RBP10.88□□□□□ -0.67
SEMA4D-221ENST00000537934 HSD17B12Q53GQ0 312 aa10.88□□□□□ -0.67
SEMA4D-221ENST00000537934 RRM2BQ7LG56 351 aa10.88□□□□□ -0.67
SEMA4D-221ENST00000537934 VTCN1Q7Z7D3 282 aa10.88□□□□□ -0.67
SEMA4D-221ENST00000537934 LIX1Q8N485 282 aa10.88□□□□□ -0.67
SEMA4D-221ENST00000537934 MS4A15Q8N5U1 240 aa10.88□□□□□ -0.67
SEMA4D-221ENST00000537934 ZNF655Q8N720 491 aaPredicted RBP10.88□□□□□ -0.67
SEMA4D-221ENST00000537934 FUBP3Q96I24 572 aaKnown RBP eCLIP10.88□□□□□ -0.67
SEMA4D-221ENST00000537934 RADILQ96JH8 1075 aa10.88□□□□□ -0.67
SEMA4D-221ENST00000537934 PPP3R2Q96LZ3 170 aa10.88□□□□□ -0.67
SEMA4D-221ENST00000537934 C12orf57Q99622 126 aa10.88□□□□□ -0.67
SEMA4D-221ENST00000537934 SEPT5Q99719 369 aaPredicted RBP10.88□□□□□ -0.67
SEMA4D-221ENST00000537934 TMEM43Q9BTV4 400 aa10.88□□□□□ -0.67
SEMA4D-221ENST00000537934 CLMPQ9H6B4 373 aa10.88□□□□□ -0.67
SEMA4D-221ENST00000537934 NMUR1Q9HB89 426 aa10.88□□□□□ -0.67
SEMA4D-221ENST00000537934 IL23AQ9NPF7 189 aa10.88□□□□□ -0.67
SEMA4D-221ENST00000537934 HPF1Q9NWY4 346 aa10.88□□□□□ -0.67
SEMA4D-221ENST00000537934 DDIT4Q9NX09 232 aa10.88□□□□□ -0.67
SEMA4D-221ENST00000537934 OR12D3Q9UGF7 316 aa10.88□□□□□ -0.67
SEMA4D-221ENST00000537934 TMCC3Q9ULS5 477 aa10.88□□□□□ -0.67
SEMA4D-221ENST00000537934 CACNG2Q9Y698 323 aa10.88□□□□□ -0.67
SEMA4D-221ENST00000537934 OR51F1A6NGY5 319 aa10.87□□□□□ -0.67
SEMA4D-221ENST00000537934 NCF1BA6NI72 391 aaPredicted RBP10.87□□□□□ -0.67
SEMA4D-221ENST00000537934 NCF1CA8MVU1 366 aaPredicted RBP10.87□□□□□ -0.67
SEMA4D-221ENST00000537934 E2F3O00716 465 aa10.87□□□□□ -0.67
SEMA4D-221ENST00000537934 PRAMEF1O95521 474 aa10.87□□□□□ -0.67
SEMA4D-221ENST00000537934 IFNA14P01570 189 aa10.87□□□□□ -0.67
SEMA4D-221ENST00000537934 ANXA3P12429 323 aa10.87□□□□□ -0.67
SEMA4D-221ENST00000537934 SYN1P17600 705 aa10.87□□□□□ -0.67
SEMA4D-221ENST00000537934 BLVRAP53004 296 aa10.87□□□□□ -0.67
SEMA4D-221ENST00000537934 DUSP4Q13115 394 aa10.87□□□□□ -0.67
SEMA4D-221ENST00000537934 GPR17Q13304 367 aa10.87□□□□□ -0.67
SEMA4D-221ENST00000537934 TTLL9Q3SXZ7 439 aa10.87□□□□□ -0.67
SEMA4D-221ENST00000537934 ABI3BPQ7Z7G0 1075 aa10.87□□□□□ -0.67
SEMA4D-221ENST00000537934 TMEM132CQ8N3T6 1108 aa10.87□□□□□ -0.67
SEMA4D-221ENST00000537934 ATPAF2Q8N5M1 289 aa10.87□□□□□ -0.67
SEMA4D-221ENST00000537934 FBXO22Q8NEZ5 403 aa10.87□□□□□ -0.67
SEMA4D-221ENST00000537934 OR52B6Q8NGF0 335 aa10.87□□□□□ -0.67
SEMA4D-221ENST00000537934 ATOH1Q92858 354 aaPredicted RBP10.87□□□□□ -0.67
SEMA4D-221ENST00000537934 CDK15Q96Q40 435 aa10.87□□□□□ -0.67
SEMA4D-221ENST00000537934 KCNH6Q9H252 994 aa10.87□□□□□ -0.67
SEMA4D-221ENST00000537934 NDUFB11Q9NX14 153 aa10.87□□□□□ -0.67
SEMA4D-221ENST00000537934 IMPAD1Q9NX62 359 aa10.87□□□□□ -0.67
SEMA4D-221ENST00000537934 DUSP12Q9UNI6 340 aa10.87□□□□□ -0.67
SEMA4D-221ENST00000537934 LSM2Q9Y333 95 aaKnown RBP10.87□□□□□ -0.67
SEMA4D-221ENST00000537934 SNX10Q9Y5X0 201 aa10.87□□□□□ -0.67
SEMA4D-221ENST00000537934 SLC22A23A1A5C7 686 aa10.87□□□□□ -0.67
SEMA4D-221ENST00000537934 LCHNA4D1U4 455 aa10.87□□□□□ -0.67
SEMA4D-221ENST00000537934 SGK494L7N484 410 aa10.87□□□□□ -0.67
SEMA4D-221ENST00000537934 CCL22O00626 93 aa10.87□□□□□ -0.67
SEMA4D-221ENST00000537934 YKT6O15498 198 aa10.87□□□□□ -0.67
SEMA4D-221ENST00000537934 NUPL2O15504 423 aaKnown RBP10.87□□□□□ -0.67
SEMA4D-221ENST00000537934 AP2A2O94973 939 aa10.87□□□□□ -0.67
SEMA4D-221ENST00000537934 CFDP00746 253 aaPredicted RBP10.87□□□□□ -0.67
SEMA4D-221ENST00000537934 HLA-DQB2P05538 268 aa10.87□□□□□ -0.67
SEMA4D-221ENST00000537934 PTBP1P26599 531 aaKnown RBP eCLIP10.87□□□□□ -0.67
SEMA4D-221ENST00000537934 HLA-FP30511 346 aa10.87□□□□□ -0.67
SEMA4D-221ENST00000537934 ZNF81P51508 661 aa10.87□□□□□ -0.67
SEMA4D-221ENST00000537934 CYP27C1Q4G0S4 372 aa10.87□□□□□ -0.67
SEMA4D-221ENST00000537934 ERICH5Q6P6B1 374 aa10.87□□□□□ -0.67
SEMA4D-221ENST00000537934 METAP1DQ6UB28 335 aaPredicted RBP10.87□□□□□ -0.67
SEMA4D-221ENST00000537934 SCD5Q86SK9 330 aa10.87□□□□□ -0.67
SEMA4D-221ENST00000537934 LUZP2Q86TE4 346 aa10.87□□□□□ -0.67
SEMA4D-221ENST00000537934 TAC4Q86UU9 113 aa10.87□□□□□ -0.67
SEMA4D-221ENST00000537934 OR6C4Q8NGE1 309 aa10.87□□□□□ -0.67
SEMA4D-221ENST00000537934 AUTS2Q8WXX7 1259 aa10.87□□□□□ -0.67
SEMA4D-221ENST00000537934 AP3S1Q92572 193 aa10.87□□□□□ -0.67
SEMA4D-221ENST00000537934 HSH2DQ96JZ2 352 aa10.87□□□□□ -0.67
SEMA4D-221ENST00000537934 ZNF558Q96NG5 402 aa10.87□□□□□ -0.67
SEMA4D-221ENST00000537934 FEVQ99581 238 aa10.87□□□□□ -0.67
SEMA4D-221ENST00000537934 NPAS1Q99742 590 aa10.87□□□□□ -0.67
SEMA4D-221ENST00000537934 AARSD1Q9BTE6 412 aaKnown RBP10.87□□□□□ -0.67
SEMA4D-221ENST00000537934 MS4A7Q9GZW8 240 aaPredicted RBP10.87□□□□□ -0.67
SEMA4D-221ENST00000537934 SYNDIG1Q9H7V2 258 aa10.87□□□□□ -0.67
SEMA4D-221ENST00000537934 ATP13A1Q9HD20 1204 aa10.87□□□□□ -0.67
SEMA4D-221ENST00000537934 OSER1Q9NX31 292 aa10.87□□□□□ -0.67
SEMA4D-221ENST00000537934 ZNF222Q9UK12 451 aa10.87□□□□□ -0.67
SEMA4D-221ENST00000537934 SZT2Q5T011 3432 aa10.87□□□□□ -0.67
SEMA4D-221ENST00000537934 F8W036 122 aa10.86□□□□□ -0.67
SEMA4D-221ENST00000537934 CBX4O00257 560 aa10.86□□□□□ -0.67
SEMA4D-221ENST00000537934 CDC7O00311 574 aa10.86□□□□□ -0.67
SEMA4D-221ENST00000537934 ABCD4O14678 606 aa10.86□□□□□ -0.67
SEMA4D-221ENST00000537934 KPNA5O15131 536 aa10.86□□□□□ -0.67
SEMA4D-221ENST00000537934 OR56A5P0C7T3 313 aa10.86□□□□□ -0.67
SEMA4D-221ENST00000537934 PIPP12273 146 aaPredicted RBP10.86□□□□□ -0.67
SEMA4D-221ENST00000537934 STOMP27105 288 aa10.86□□□□□ -0.67
SEMA4D-221ENST00000537934 OR1D2P34982 312 aa10.86□□□□□ -0.67
SEMA4D-221ENST00000537934 PPP3R1P63098 170 aa10.86□□□□□ -0.67
SEMA4D-221ENST00000537934 RPL38P63173 70 aaKnown RBP10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms