RNA–Protein interactions for RNA: ENST00000537002.5

PTPRD-213, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 8,224 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-213ENST00000537002 SYPL2Q5VXT5 272 aa5.19□□□□□ -1.58
PTPRD-213ENST00000537002 ARL9Q6T311 187 aa5.19□□□□□ -1.58
PTPRD-213ENST00000537002 TEX261Q6UWH6 196 aa5.19□□□□□ -1.58
PTPRD-213ENST00000537002 HSD17B13Q7Z5P4 300 aaPredicted RBP5.19□□□□□ -1.58
PTPRD-213ENST00000537002 PEG10Q86TG7 708 aaKnown RBP5.19□□□□□ -1.58
PTPRD-213ENST00000537002 WDTC1Q8N5D0 677 aa5.19□□□□□ -1.58
PTPRD-213ENST00000537002 BEND7Q8N7W2 519 aaPredicted RBP5.19□□□□□ -1.58
PTPRD-213ENST00000537002 DNERQ8NFT8 737 aa5.19□□□□□ -1.58
PTPRD-213ENST00000537002 OR6K2Q8NGY2 324 aa5.19□□□□□ -1.58
PTPRD-213ENST00000537002 SNX33Q8WV41 574 aa5.19□□□□□ -1.58
PTPRD-213ENST00000537002 COQ10AQ96MF6 247 aa5.19□□□□□ -1.58
PTPRD-213ENST00000537002 ARHGAP39Q9C0H5 1083 aa5.19□□□□□ -1.58
PTPRD-213ENST00000537002 TRPV4Q9HBA0 871 aa5.19□□□□□ -1.58
PTPRD-213ENST00000537002 NUDT15Q9NV35 164 aa5.19□□□□□ -1.58
PTPRD-213ENST00000537002 PPP1R14DQ9NXH3 145 aa5.19□□□□□ -1.58
PTPRD-213ENST00000537002 SRRDQ9UH36 339 aa5.19□□□□□ -1.58
PTPRD-213ENST00000537002 PSORS1C1Q9UIG5 152 aa5.19□□□□□ -1.58
PTPRD-213ENST00000537002 SCP2D1Q9UJQ7 156 aa5.19□□□□□ -1.58
PTPRD-213ENST00000537002 ENTPD4Q9Y227 616 aa5.19□□□□□ -1.58
PTPRD-213ENST00000537002 DERAQ9Y315 318 aa5.19□□□□□ -1.58
PTPRD-213ENST00000537002 U3KQ87 197 aa5.19□□□□□ -1.58
PTPRD-213ENST00000537002 CARNS1A5YM72 827 aa5.19□□□□□ -1.58
PTPRD-213ENST00000537002 B4DXG7 233 aa5.19□□□□□ -1.58
PTPRD-213ENST00000537002 M0R129 80 aa5.19□□□□□ -1.58
PTPRD-213ENST00000537002 PCDH17O14917 1159 aa5.19□□□□□ -1.58
PTPRD-213ENST00000537002 ENTPD6O75354 484 aa5.19□□□□□ -1.58
PTPRD-213ENST00000537002 RAB36O95755 333 aa5.19□□□□□ -1.58
PTPRD-213ENST00000537002 HLA-DQB2P05538 268 aa5.19□□□□□ -1.58
PTPRD-213ENST00000537002 ADORA3P0DMS8 318 aa5.19□□□□□ -1.58
PTPRD-213ENST00000537002 ARL2P36404 184 aa5.19□□□□□ -1.58
PTPRD-213ENST00000537002 ST8SIA6P61647 398 aa5.19□□□□□ -1.58
PTPRD-213ENST00000537002 NPRL3Q12980 569 aa5.19□□□□□ -1.58
PTPRD-213ENST00000537002 UNC50Q53HI1 259 aa5.19□□□□□ -1.58
PTPRD-213ENST00000537002 PRAMEF17Q5VTA0 474 aa5.19□□□□□ -1.58
PTPRD-213ENST00000537002 PDZD9Q8IXQ8 264 aa5.19□□□□□ -1.58
PTPRD-213ENST00000537002 KLHDC8BQ8IXV7 354 aa5.19□□□□□ -1.58
PTPRD-213ENST00000537002 EIF4E3Q8N5X7 224 aaKnown RBP5.19□□□□□ -1.58
PTPRD-213ENST00000537002 NFKBIDQ8NI38 313 aa5.19□□□□□ -1.58
PTPRD-213ENST00000537002 XAGE5Q8WWM1 108 aa5.19□□□□□ -1.58
PTPRD-213ENST00000537002 SGK3Q96BR1 496 aa5.19□□□□□ -1.58
PTPRD-213ENST00000537002 CHFRQ96EP1 664 aa5.19□□□□□ -1.58
PTPRD-213ENST00000537002 HMCESQ96FZ2 354 aa5.19□□□□□ -1.58
PTPRD-213ENST00000537002 MFSD1Q9H3U5 465 aa5.19□□□□□ -1.58
PTPRD-213ENST00000537002 TPT1P8Q9HAU6 139 aa5.19□□□□□ -1.58
PTPRD-213ENST00000537002 PDLIM7Q9NR12 457 aa5.19□□□□□ -1.58
PTPRD-213ENST00000537002 PCDHB14Q9Y5E9 798 aa5.19□□□□□ -1.58
PTPRD-213ENST00000537002 TRAPPC13A5PLN9 417 aa5.19□□□□□ -1.58
PTPRD-213ENST00000537002 OR5K4A6NMS3 321 aa5.19□□□□□ -1.58
PTPRD-213ENST00000537002 MANBAO00462 879 aa5.19□□□□□ -1.58
PTPRD-213ENST00000537002 WNT10BO00744 389 aa5.19□□□□□ -1.58
PTPRD-213ENST00000537002 RAD1O60671 282 aa5.19□□□□□ -1.58
PTPRD-213ENST00000537002 TP53P04637 393 aaPredicted RBP5.19□□□□□ -1.58
PTPRD-213ENST00000537002 PDHA2P29803 388 aa5.19□□□□□ -1.58
PTPRD-213ENST00000537002 ARFIP1P53367 373 aa5.19□□□□□ -1.58
PTPRD-213ENST00000537002 OAZ1P54368 228 aa5.19□□□□□ -1.58
PTPRD-213ENST00000537002 MANFP55145 182 aaKnown RBP5.19□□□□□ -1.58
PTPRD-213ENST00000537002 RAB4BP61018 213 aa5.19□□□□□ -1.58
PTPRD-213ENST00000537002 TUSC3Q13454 348 aa5.19□□□□□ -1.58
PTPRD-213ENST00000537002 GPR139Q6DWJ6 353 aa5.19□□□□□ -1.58
PTPRD-213ENST00000537002 FAM198BQ6UWH4 519 aa5.19□□□□□ -1.58
PTPRD-213ENST00000537002 PAMR1Q6UXH9 720 aa5.19□□□□□ -1.58
PTPRD-213ENST00000537002 ABHD15Q6UXT9 468 aa5.19□□□□□ -1.58
PTPRD-213ENST00000537002 DTWD1Q8N5C7 304 aa5.19□□□□□ -1.58
PTPRD-213ENST00000537002 COL26A1Q96A83 441 aa5.19□□□□□ -1.58
PTPRD-213ENST00000537002 ZNF599Q96NL3 588 aa5.19□□□□□ -1.58
PTPRD-213ENST00000537002 DPH2Q9BQC3 489 aaPredicted RBP5.19□□□□□ -1.58
PTPRD-213ENST00000537002 MARVELD1Q9BSK0 173 aa5.19□□□□□ -1.58
PTPRD-213ENST00000537002 TM6SF2Q9BZW4 377 aa5.19□□□□□ -1.58
PTPRD-213ENST00000537002 SRRQ9GZT4 340 aa5.19□□□□□ -1.58
PTPRD-213ENST00000537002 SLC25A51Q9H1U9 297 aa5.19□□□□□ -1.58
PTPRD-213ENST00000537002 ABCG5Q9H222 651 aa5.19□□□□□ -1.58
PTPRD-213ENST00000537002 ZDHHC6Q9H6R6 413 aa5.19□□□□□ -1.58
PTPRD-213ENST00000537002 KLF2Q9Y5W3 355 aaPredicted RBP5.19□□□□□ -1.58
PTPRD-213ENST00000537002 GLYATL1P3A0A0U1RQE8 302 aa5.19□□□□□ -1.58
PTPRD-213ENST00000537002 NUDT19A8MXV4 375 aa5.19□□□□□ -1.58
PTPRD-213ENST00000537002 ZNF670-ZNF695F2Z2N8 137 aa5.19□□□□□ -1.58
PTPRD-213ENST00000537002 H3BRB1 525 aa5.19□□□□□ -1.58
PTPRD-213ENST00000537002 CATP04040 527 aaKnown RBP5.19□□□□□ -1.58
PTPRD-213ENST00000537002 H2AFB2P0C5Z0 115 aa5.19□□□□□ -1.58
PTPRD-213ENST00000537002 PCBP1Q15365 356 aaKnown RBP eCLIP5.19□□□□□ -1.58
PTPRD-213ENST00000537002 CATSPEREQ5SY80 951 aa5.19□□□□□ -1.58
PTPRD-213ENST00000537002 SFRP4Q6FHJ7 346 aaPredicted RBP5.19□□□□□ -1.58
PTPRD-213ENST00000537002 SLC25A25Q6KCM7 469 aa5.19□□□□□ -1.58
PTPRD-213ENST00000537002 GALNT10Q86SR1 603 aa5.19□□□□□ -1.58
PTPRD-213ENST00000537002 SLC30A8Q8IWU4 369 aa5.19□□□□□ -1.58
PTPRD-213ENST00000537002 ZFP41Q8N8Y5 198 aa5.19□□□□□ -1.58
PTPRD-213ENST00000537002 CLRN3Q8NCR9 226 aa5.19□□□□□ -1.58
PTPRD-213ENST00000537002 TSEN15Q8WW01 171 aaKnown RBP5.19□□□□□ -1.58
PTPRD-213ENST00000537002 SLC9A6Q92581 669 aa5.19□□□□□ -1.58
PTPRD-213ENST00000537002 PDGFDQ9GZP0 370 aaPredicted RBP5.19□□□□□ -1.58
PTPRD-213ENST00000537002 GSTO2Q9H4Y5 243 aa5.19□□□□□ -1.58
PTPRD-213ENST00000537002 DNAJC15Q9Y5T4 150 aa5.19□□□□□ -1.58
PTPRD-213ENST00000537002 POM121CA8CG34 1229 aa5.19□□□□□ -1.58
PTPRD-213ENST00000537002 PDHXO00330 501 aa5.19□□□□□ -1.58
PTPRD-213ENST00000537002 HCRTO43612 131 aa5.19□□□□□ -1.58
PTPRD-213ENST00000537002 KCNJ13O60928 360 aa5.19□□□□□ -1.58
PTPRD-213ENST00000537002 CSN2P05814 226 aa5.19□□□□□ -1.58
PTPRD-213ENST00000537002 HOXC6P09630 235 aa5.19□□□□□ -1.58
PTPRD-213ENST00000537002 TNFSF8P32971 234 aa5.19□□□□□ -1.58
PTPRD-213ENST00000537002 CLDN20P56880 219 aa5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 83.7 ms