RNA–Protein interactions for RNA: ENST00000536999.1

CHD4-206, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 3

Gene CHD4, Length 318 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-206ENST00000536999 HSF2Q03933 536 aa5.58□□□□□ -1.52
CHD4-206ENST00000536999 SOX4Q06945 474 aaPredicted RBP5.58□□□□□ -1.52
CHD4-206ENST00000536999 CNTN1Q12860 1018 aa5.58□□□□□ -1.52
CHD4-206ENST00000536999 NFATC2Q13469 925 aa5.58□□□□□ -1.52
CHD4-206ENST00000536999 ARHGEF7Q14155 803 aa5.58□□□□□ -1.52
CHD4-206ENST00000536999 DSC3Q14574 896 aa5.58□□□□□ -1.52
CHD4-206ENST00000536999 PTGR1Q14914 329 aa5.58□□□□□ -1.52
CHD4-206ENST00000536999 GPR19Q15760 415 aa5.58□□□□□ -1.52
CHD4-206ENST00000536999 PYDC2Q56P42 97 aa5.58□□□□□ -1.52
CHD4-206ENST00000536999 CARD16Q5EG05 197 aa5.58□□□□□ -1.52
CHD4-206ENST00000536999 C10orf120Q5SQS8 335 aa5.58□□□□□ -1.52
CHD4-206ENST00000536999 CATSPEREQ5SY80 951 aa5.58□□□□□ -1.52
CHD4-206ENST00000536999 GPRC6AQ5T6X5 926 aa5.58□□□□□ -1.52
CHD4-206ENST00000536999 FRMPD2BQ6IN97 320 aa5.58□□□□□ -1.52
CHD4-206ENST00000536999 GLB1LQ6UWU2 654 aa5.58□□□□□ -1.52
CHD4-206ENST00000536999 PAMR1Q6UXH9 720 aa5.58□□□□□ -1.52
CHD4-206ENST00000536999 DPY19L3Q6ZPD9 716 aa5.58□□□□□ -1.52
CHD4-206ENST00000536999 RPS27LQ71UM5 84 aaKnown RBP5.58□□□□□ -1.52
CHD4-206ENST00000536999 VASH1Q7L8A9 365 aaPredicted RBP5.58□□□□□ -1.52
CHD4-206ENST00000536999 GPRIN1Q7Z2K8 1008 aa5.58□□□□□ -1.52
CHD4-206ENST00000536999 SCD5Q86SK9 330 aa5.58□□□□□ -1.52
CHD4-206ENST00000536999 LDB1Q86U70 411 aaPredicted RBP5.58□□□□□ -1.52
CHD4-206ENST00000536999 GATAD2AQ86YP4 633 aa5.58□□□□□ -1.52
CHD4-206ENST00000536999 NPAS3Q8IXF0 933 aa5.58□□□□□ -1.52
CHD4-206ENST00000536999 GPALPP1Q8IXQ4 340 aa5.58□□□□□ -1.52
CHD4-206ENST00000536999 KLHDC8AQ8IYD2 350 aa5.58□□□□□ -1.52
CHD4-206ENST00000536999 CLIP4Q8N3C7 705 aa5.58□□□□□ -1.52
CHD4-206ENST00000536999 FAM26EQ8N5C1 309 aa5.58□□□□□ -1.52
CHD4-206ENST00000536999 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP5.58□□□□□ -1.52
CHD4-206ENST00000536999 DTWD2Q8NBA8 298 aa5.58□□□□□ -1.52
CHD4-206ENST00000536999 TMIEQ8NEW7 156 aa5.58□□□□□ -1.52
CHD4-206ENST00000536999 B3GNT7Q8NFL0 401 aa5.58□□□□□ -1.52
CHD4-206ENST00000536999 TET1Q8NFU7 2136 aa5.58□□□□□ -1.52
CHD4-206ENST00000536999 TMEM163Q8TC26 289 aa5.58□□□□□ -1.52
CHD4-206ENST00000536999 CREB3L4Q8TEY5 395 aa5.58□□□□□ -1.52
CHD4-206ENST00000536999 SMG7Q92540 1137 aaKnown RBP5.58□□□□□ -1.52
CHD4-206ENST00000536999 DNASE1L2Q92874 299 aa5.58□□□□□ -1.52
CHD4-206ENST00000536999 UFD1Q92890 307 aa5.58□□□□□ -1.52
CHD4-206ENST00000536999 MRPL48Q96GC5 212 aaKnown RBP5.58□□□□□ -1.52
CHD4-206ENST00000536999 TPD52L3Q96J77 140 aa5.58□□□□□ -1.52
CHD4-206ENST00000536999 C7orf34Q96L11 122 aa5.58□□□□□ -1.52
CHD4-206ENST00000536999 CMTM3Q96MX0 182 aa5.58□□□□□ -1.52
CHD4-206ENST00000536999 ZNF578Q96N58 590 aaPredicted RBP5.58□□□□□ -1.52
CHD4-206ENST00000536999 FAM193BQ96PV7 902 aaPredicted RBP5.58□□□□□ -1.52
CHD4-206ENST00000536999 SLC38A2Q96QD8 506 aa5.58□□□□□ -1.52
CHD4-206ENST00000536999 HS3ST6Q96QI5 342 aa5.58□□□□□ -1.52
CHD4-206ENST00000536999 VPS35Q96QK1 796 aa5.58□□□□□ -1.52
CHD4-206ENST00000536999 COPS8Q99627 209 aa5.58□□□□□ -1.52
CHD4-206ENST00000536999 MRI1Q9BV20 369 aa5.58□□□□□ -1.52
CHD4-206ENST00000536999 BTBD2Q9BX70 525 aa5.58□□□□□ -1.52
CHD4-206ENST00000536999 UCK2Q9BZX2 261 aa5.58□□□□□ -1.52
CHD4-206ENST00000536999 POLR2J2Q9GZM3 115 aaKnown RBP5.58□□□□□ -1.52
CHD4-206ENST00000536999 TMEM168Q9H0V1 697 aa5.58□□□□□ -1.52
CHD4-206ENST00000536999 LMAN2LQ9H0V9 348 aa5.58□□□□□ -1.52
CHD4-206ENST00000536999 FN3KQ9H479 309 aa5.58□□□□□ -1.52
CHD4-206ENST00000536999 ZFYVE1Q9HBF4 777 aa5.58□□□□□ -1.52
CHD4-206ENST00000536999 SARS2Q9NP81 518 aaKnown RBP5.58□□□□□ -1.52
CHD4-206ENST00000536999 EMC7Q9NPA0 242 aa5.58□□□□□ -1.52
CHD4-206ENST00000536999 EXOSC4Q9NPD3 245 aaKnown RBP5.58□□□□□ -1.52
CHD4-206ENST00000536999 FZD3Q9NPG1 666 aa5.58□□□□□ -1.52
CHD4-206ENST00000536999 MED17Q9NVC6 651 aa5.58□□□□□ -1.52
CHD4-206ENST00000536999 MTPAPQ9NVV4 582 aaKnown RBP eCLIP5.58□□□□□ -1.524e-6■■□□□ 13.4
CHD4-206ENST00000536999 ASB6Q9NWX5 421 aa5.58□□□□□ -1.52
CHD4-206ENST00000536999 CYB5R1Q9UHQ9 305 aa5.58□□□□□ -1.52
CHD4-206ENST00000536999 CRLS1Q9UJA2 301 aa5.58□□□□□ -1.52
CHD4-206ENST00000536999 PNMA8BQ9ULN7 279 aaPredicted RBP5.58□□□□□ -1.52
CHD4-206ENST00000536999 FZD4Q9ULV1 537 aa5.58□□□□□ -1.52
CHD4-206ENST00000536999 MAFFQ9ULX9 164 aa5.58□□□□□ -1.52
CHD4-206ENST00000536999 PPT2Q9UMR5 302 aa5.58□□□□□ -1.52
CHD4-206ENST00000536999 DIMT1Q9UNQ2 313 aaKnown RBP5.58□□□□□ -1.52
CHD4-206ENST00000536999 PCDHGA2Q9Y5H1 932 aa5.58□□□□□ -1.52
CHD4-206ENST00000536999 CSNK1G3Q9Y6M4 447 aa5.58□□□□□ -1.52
CHD4-206ENST00000536999 HELZ2Q9BYK8 2649 aaKnown RBP5.57□□□□□ -1.52
CHD4-206ENST00000536999 PTPRSQ13332 1948 aa5.57□□□□□ -1.52
CHD4-206ENST00000536999 TRBV5-4A0A0C4DH59 114 aa5.57□□□□□ -1.52
CHD4-206ENST00000536999 A0A1B0GTQ1 180 aa5.57□□□□□ -1.52
CHD4-206ENST00000536999 TRDV1A0A1B0GX56 115 aa5.57□□□□□ -1.52
CHD4-206ENST00000536999 SLC12A8A0AV02 714 aa5.57□□□□□ -1.52
CHD4-206ENST00000536999 OR5K3A6NET4 321 aa5.57□□□□□ -1.52
CHD4-206ENST00000536999 C5orf58C9J3I9 102 aa5.57□□□□□ -1.52
CHD4-206ENST00000536999 ARHGAP33O14559 1287 aa5.57□□□□□ -1.52
CHD4-206ENST00000536999 ENPP3O14638 875 aa5.57□□□□□ -1.52
CHD4-206ENST00000536999 AKAP8O43823 692 aaKnown RBP5.57□□□□□ -1.52
CHD4-206ENST00000536999 LZTS3O60299 673 aaPredicted RBP5.57□□□□□ -1.52
CHD4-206ENST00000536999 PRAF2O60831 178 aa5.57□□□□□ -1.52
CHD4-206ENST00000536999 ZNF780AO75290 641 aaPredicted RBP5.57□□□□□ -1.52
CHD4-206ENST00000536999 NIPSNAP2O75323 286 aa5.57□□□□□ -1.52
CHD4-206ENST00000536999 REM1O75628 298 aa5.57□□□□□ -1.52
CHD4-206ENST00000536999 SEMA3DO95025 777 aa5.57□□□□□ -1.52
CHD4-206ENST00000536999 TRBC1P01850 177 aa5.57□□□□□ -1.52
CHD4-206ENST00000536999 MYCLP1P12525 358 aaPredicted RBP5.57□□□□□ -1.52
CHD4-206ENST00000536999 HLA-EP13747 358 aa5.57□□□□□ -1.52
CHD4-206ENST00000536999 TYRP14679 529 aa5.57□□□□□ -1.52
CHD4-206ENST00000536999 SELPP16109 830 aa5.57□□□□□ -1.52
CHD4-206ENST00000536999 SMPD1P17405 629 aa5.57□□□□□ -1.52
CHD4-206ENST00000536999 HOXB9P17482 250 aaPredicted RBP5.57□□□□□ -1.52
CHD4-206ENST00000536999 GABRB1P18505 474 aa5.57□□□□□ -1.52
CHD4-206ENST00000536999 ALAS2P22557 587 aa5.57□□□□□ -1.52
CHD4-206ENST00000536999 F8A1P23610 371 aa5.57□□□□□ -1.52
CHD4-206ENST00000536999 IL32P24001 234 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms