RNA–Protein interactions for RNA: ENST00000536717.5

TNFRSF1A-209, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,503 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-209ENST00000536717 LIPMQ5VYY2 423 aa16.75■□□□□ 0.27
TNFRSF1A-209ENST00000536717 FCRLBQ6BAA4 426 aa16.75■□□□□ 0.27
TNFRSF1A-209ENST00000536717 RPUSD3Q6P087 351 aaKnown RBP16.75■□□□□ 0.27
TNFRSF1A-209ENST00000536717 TRIM40Q6P9F5 258 aa16.75■□□□□ 0.27
TNFRSF1A-209ENST00000536717 C10orf107Q8IVU9 208 aa16.75■□□□□ 0.27
TNFRSF1A-209ENST00000536717 LAS2Q8IYD9 372 aa16.75■□□□□ 0.27
TNFRSF1A-209ENST00000536717 ANKRD42Q8N9B4 389 aa16.75■□□□□ 0.27
TNFRSF1A-209ENST00000536717 OR1N1Q8NGS0 311 aa16.75■□□□□ 0.27
TNFRSF1A-209ENST00000536717 ZNF473Q8WTR7 871 aaKnown RBP16.75■□□□□ 0.27
TNFRSF1A-209ENST00000536717 L3HYPDHQ96EM0 354 aa16.75■□□□□ 0.27
TNFRSF1A-209ENST00000536717 TMEM237Q96Q45 408 aa16.75■□□□□ 0.27
TNFRSF1A-209ENST00000536717 F2RL3Q96RI0 385 aa16.75■□□□□ 0.27
TNFRSF1A-209ENST00000536717 MS4A8Q9BY19 250 aa16.75■□□□□ 0.27
TNFRSF1A-209ENST00000536717 KCNK13Q9HB14 408 aa16.75■□□□□ 0.27
TNFRSF1A-209ENST00000536717 PRDM9Q9NQV7 894 aa16.75■□□□□ 0.27
TNFRSF1A-209ENST00000536717 PRDM7Q9NQW5 492 aa16.75■□□□□ 0.27
TNFRSF1A-209ENST00000536717 STMN3Q9NZ72 180 aa16.75■□□□□ 0.27
TNFRSF1A-209ENST00000536717 PCTPQ9UKL6 214 aa16.75■□□□□ 0.27
TNFRSF1A-209ENST00000536717 CLDN16Q9Y5I7 305 aa16.75■□□□□ 0.27
TNFRSF1A-209ENST00000536717 A8MUI8 341 aa16.74■□□□□ 0.27
TNFRSF1A-209ENST00000536717 CERS1P27544 350 aa16.74■□□□□ 0.27
TNFRSF1A-209ENST00000536717 RAB38P57729 211 aa16.74■□□□□ 0.27
TNFRSF1A-209ENST00000536717 DNAJB13P59910 316 aa16.74■□□□□ 0.27
TNFRSF1A-209ENST00000536717 NAA20P61599 178 aa16.74■□□□□ 0.27
TNFRSF1A-209ENST00000536717 MPP2Q14168 576 aa16.74■□□□□ 0.27
TNFRSF1A-209ENST00000536717 HIST2H2ACQ16777 129 aaPredicted RBP16.74■□□□□ 0.27
TNFRSF1A-209ENST00000536717 ZNF678Q5SXM1 525 aa16.74■□□□□ 0.27
TNFRSF1A-209ENST00000536717 HIST2H2AA3Q6FI13 130 aa16.74■□□□□ 0.27
TNFRSF1A-209ENST00000536717 GOLGA7Q7Z5G4 137 aa16.74■□□□□ 0.27
TNFRSF1A-209ENST00000536717 TMEM52Q8NDY8 209 aa16.74■□□□□ 0.27
TNFRSF1A-209ENST00000536717 GRHL3Q8TE85 626 aa16.74■□□□□ 0.27
TNFRSF1A-209ENST00000536717 MAGEB10Q96LZ2 347 aaPredicted RBP16.74■□□□□ 0.27
TNFRSF1A-209ENST00000536717 IPPKQ9H8X2 491 aa16.74■□□□□ 0.27
TNFRSF1A-209ENST00000536717 TEKT2Q9UIF3 430 aa16.74■□□□□ 0.27
TNFRSF1A-209ENST00000536717 NBPF19A0A087WUL8 3843 aa16.74■□□□□ 0.27
TNFRSF1A-209ENST00000536717 UTP20O75691 2785 aaKnown RBP16.73■□□□□ 0.27
TNFRSF1A-209ENST00000536717 A0A088AWK7 358 aa16.73■□□□□ 0.27
TNFRSF1A-209ENST00000536717 TRAV17A0A0B4J275 112 aa16.73■□□□□ 0.27
TNFRSF1A-209ENST00000536717 B3GALT2O43825 422 aa16.73■□□□□ 0.27
TNFRSF1A-209ENST00000536717 TRIM13O60858 407 aa16.73■□□□□ 0.27
TNFRSF1A-209ENST00000536717 ZNF10P21506 573 aaPredicted RBP16.73■□□□□ 0.27
TNFRSF1A-209ENST00000536717 ALDH3A1P30838 453 aa16.73■□□□□ 0.27
TNFRSF1A-209ENST00000536717 ARL1P40616 181 aaPredicted RBP16.73■□□□□ 0.27
TNFRSF1A-209ENST00000536717 SERPINB4P48594 390 aa16.73■□□□□ 0.27
TNFRSF1A-209ENST00000536717 HNRNPFP52597 415 aaKnown RBP16.73■□□□□ 0.27
TNFRSF1A-209ENST00000536717 CFAP157Q5JU67 520 aa16.73■□□□□ 0.27
TNFRSF1A-209ENST00000536717 ACER2Q5QJU3 275 aa16.73■□□□□ 0.27
TNFRSF1A-209ENST00000536717 FHL5Q5TD97 284 aa16.73■□□□□ 0.27
TNFRSF1A-209ENST00000536717 HHATQ5VTY9 493 aa16.73■□□□□ 0.27
TNFRSF1A-209ENST00000536717 MED27Q6P2C8 311 aa16.73■□□□□ 0.27
TNFRSF1A-209ENST00000536717 UBE3DQ7Z6J8 389 aa16.73■□□□□ 0.27
TNFRSF1A-209ENST00000536717 CRLF3Q8IUI8 442 aa16.73■□□□□ 0.27
TNFRSF1A-209ENST00000536717 SCUBE1Q8IWY4 988 aa16.73■□□□□ 0.27
TNFRSF1A-209ENST00000536717 CCNYL1Q8N7R7 359 aa16.73■□□□□ 0.27
TNFRSF1A-209ENST00000536717 OR7G3Q8NG95 312 aa16.73■□□□□ 0.27
TNFRSF1A-209ENST00000536717 ELP5Q8TE02 316 aa16.73■□□□□ 0.27
TNFRSF1A-209ENST00000536717 ZNF483Q8TF39 744 aaPredicted RBP16.73■□□□□ 0.27
TNFRSF1A-209ENST00000536717 ATP6V1E2Q96A05 226 aa16.73■□□□□ 0.27
TNFRSF1A-209ENST00000536717 SERINC2Q96SA4 455 aa16.73■□□□□ 0.27
TNFRSF1A-209ENST00000536717 MED4Q9NPJ6 270 aa16.73■□□□□ 0.27
TNFRSF1A-209ENST00000536717 SEMA4BQ9NPR2 832 aaPredicted RBP16.73■□□□□ 0.27
TNFRSF1A-209ENST00000536717 AGPAT4Q9NRZ5 378 aa16.73■□□□□ 0.27
TNFRSF1A-209ENST00000536717 DAPP1Q9UN19 280 aa16.73■□□□□ 0.27
TNFRSF1A-209ENST00000536717 MMACHCQ9Y4U1 282 aa16.73■□□□□ 0.27
TNFRSF1A-209ENST00000536717 MYO7BQ6PIF6 2116 aa16.72■□□□□ 0.27
TNFRSF1A-209ENST00000536717 OR5H15A6NDH6 313 aa16.72■□□□□ 0.27
TNFRSF1A-209ENST00000536717 SAGE2PA6NJ88 616 aa16.72■□□□□ 0.27
TNFRSF1A-209ENST00000536717 TGFBR3LH3BV60 316 aa16.72■□□□□ 0.27
TNFRSF1A-209ENST00000536717 MAN1A2O60476 641 aa16.72■□□□□ 0.27
TNFRSF1A-209ENST00000536717 BPGMP07738 259 aa16.72■□□□□ 0.27
TNFRSF1A-209ENST00000536717 NAGLUP54802 743 aa16.72■□□□□ 0.27
TNFRSF1A-209ENST00000536717 MTTPP55157 894 aa16.72■□□□□ 0.27
TNFRSF1A-209ENST00000536717 LIM2P55344 173 aa16.72■□□□□ 0.27
TNFRSF1A-209ENST00000536717 CLCQ05315 142 aa16.72■□□□□ 0.27
TNFRSF1A-209ENST00000536717 UNC50Q53HI1 259 aa16.72■□□□□ 0.27
TNFRSF1A-209ENST00000536717 GRHL2Q6ISB3 625 aa16.72■□□□□ 0.27
TNFRSF1A-209ENST00000536717 ZNF793Q6ZN11 406 aa16.72■□□□□ 0.27
TNFRSF1A-209ENST00000536717 NUDCD3Q8IVD9 361 aa16.72■□□□□ 0.27
TNFRSF1A-209ENST00000536717 BEST3Q8N1M1 668 aa16.72■□□□□ 0.27
TNFRSF1A-209ENST00000536717 KIF2BQ8N4N8 673 aa16.72■□□□□ 0.27
TNFRSF1A-209ENST00000536717 FAR1Q8WVX9 515 aa16.72■□□□□ 0.27
TNFRSF1A-209ENST00000536717 UBE2E3Q969T4 207 aa16.72■□□□□ 0.27
TNFRSF1A-209ENST00000536717 ZNF354BQ96LW1 612 aa16.72■□□□□ 0.27
TNFRSF1A-209ENST00000536717 NSUN5Q96P11 429 aaKnown RBP16.72■□□□□ 0.27
TNFRSF1A-209ENST00000536717 TAAR6Q96RI8 345 aa16.72■□□□□ 0.27
TNFRSF1A-209ENST00000536717 CSF3RQ99062 836 aa16.72■□□□□ 0.27
TNFRSF1A-209ENST00000536717 PAIP2Q9BPZ3 127 aaKnown RBP16.72■□□□□ 0.27
TNFRSF1A-209ENST00000536717 MECRQ9BV79 373 aa16.72■□□□□ 0.27
TNFRSF1A-209ENST00000536717 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP16.72■□□□□ 0.27
TNFRSF1A-209ENST00000536717 NOL11Q9H8H0 719 aaKnown RBP16.72■□□□□ 0.27
TNFRSF1A-209ENST00000536717 GTF3C1Q12789 2109 aa16.72■□□□□ 0.27
TNFRSF1A-209ENST00000536717 EML6Q6ZMW3 1958 aa16.72■□□□□ 0.27
TNFRSF1A-209ENST00000536717 ANKUB1A6NFN9 424 aa16.71■□□□□ 0.27
TNFRSF1A-209ENST00000536717 CYR61O00622 381 aa16.71■□□□□ 0.27
TNFRSF1A-209ENST00000536717 BIRC5O15392 142 aa16.71■□□□□ 0.27
TNFRSF1A-209ENST00000536717 SEMA7AO75326 666 aa16.71■□□□□ 0.27
TNFRSF1A-209ENST00000536717 MLYCDO95822 493 aa16.71■□□□□ 0.27
TNFRSF1A-209ENST00000536717 DHRS4L1P0CG22 281 aa16.71■□□□□ 0.27
TNFRSF1A-209ENST00000536717 PCNAP12004 261 aa16.71■□□□□ 0.27
TNFRSF1A-209ENST00000536717 CCNG1P51959 295 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms