RNA–Protein interactions for RNA: ENST00000535897.1

CHFR-211, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 4

Gene CHFR, Length 587 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-211ENST00000535897 COPS7AQ9UBW8 275 aa7.44□□□□□ -1.22
CHFR-211ENST00000535897 CBLCQ9ULV8 474 aa7.44□□□□□ -1.22
CHFR-211ENST00000535897 PPIEQ9UNP9 301 aaKnown RBP7.44□□□□□ -1.22
CHFR-211ENST00000535897 SLC22A14Q9Y267 594 aa7.44□□□□□ -1.22
CHFR-211ENST00000535897 KCNE2Q9Y6J6 123 aa7.44□□□□□ -1.22
CHFR-211ENST00000535897 ARHGAP21Q5T5U3 1957 aa7.43□□□□□ -1.22
CHFR-211ENST00000535897 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.43□□□□□ -1.22
CHFR-211ENST00000535897 A0A1B0GVC2 190 aa7.43□□□□□ -1.22
CHFR-211ENST00000535897 TUBAL3A6NHL2 446 aa7.43□□□□□ -1.22
CHFR-211ENST00000535897 C17orf105B2RV13 164 aa7.43□□□□□ -1.22
CHFR-211ENST00000535897 TGFBR3LH3BV60 316 aa7.43□□□□□ -1.22
CHFR-211ENST00000535897 SYT5O00445 386 aa7.43□□□□□ -1.22
CHFR-211ENST00000535897 HCN1O60741 890 aa7.43□□□□□ -1.22
CHFR-211ENST00000535897 H2AFYO75367 372 aaKnown RBP7.43□□□□□ -1.22
CHFR-211ENST00000535897 ENO2P09104 434 aaPredicted RBP7.43□□□□□ -1.22
CHFR-211ENST00000535897 INHBBP09529 407 aa7.43□□□□□ -1.22
CHFR-211ENST00000535897 SMIM10L1P0DMW3 83 aa7.43□□□□□ -1.22
CHFR-211ENST00000535897 CCL3P10147 92 aa7.43□□□□□ -1.22
CHFR-211ENST00000535897 CXCR5P32302 372 aa7.43□□□□□ -1.22
CHFR-211ENST00000535897 PIGAP37287 484 aa7.43□□□□□ -1.22
CHFR-211ENST00000535897 MAGEA6P43360 314 aa7.43□□□□□ -1.22
CHFR-211ENST00000535897 ASCL1P50553 236 aa7.43□□□□□ -1.22
CHFR-211ENST00000535897 PGGT1BP53609 377 aa7.43□□□□□ -1.22
CHFR-211ENST00000535897 PLA2G16P53816 162 aa7.43□□□□□ -1.22
CHFR-211ENST00000535897 RAB38P57729 211 aa7.43□□□□□ -1.22
CHFR-211ENST00000535897 RNF4P78317 190 aa7.43□□□□□ -1.22
CHFR-211ENST00000535897 TIAL1Q01085 375 aaKnown RBP eCLIP7.43□□□□□ -1.22
CHFR-211ENST00000535897 RUNX2Q13950 521 aa7.43□□□□□ -1.22
CHFR-211ENST00000535897 RCN2Q14257 317 aa7.43□□□□□ -1.22
CHFR-211ENST00000535897 PCBP2Q15366 365 aaKnown RBP eCLIP7.43□□□□□ -1.22
CHFR-211ENST00000535897 BBS9Q3SYG4 887 aa7.43□□□□□ -1.22
CHFR-211ENST00000535897 PRAMEF20Q5VT98 475 aa7.43□□□□□ -1.22
CHFR-211ENST00000535897 TRIM40Q6P9F5 258 aa7.43□□□□□ -1.22
CHFR-211ENST00000535897 TMEM139Q8IV31 216 aa7.43□□□□□ -1.22
CHFR-211ENST00000535897 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP7.43□□□□□ -1.22
CHFR-211ENST00000535897 ZNF595Q8IYB9 648 aa7.43□□□□□ -1.22
CHFR-211ENST00000535897 KLHDC8AQ8IYD2 350 aa7.43□□□□□ -1.22
CHFR-211ENST00000535897 FBXW8Q8N3Y1 598 aa7.43□□□□□ -1.22
CHFR-211ENST00000535897 GOLM1Q8NBJ4 401 aa7.43□□□□□ -1.22
CHFR-211ENST00000535897 C2CD4AQ8NCU7 369 aaPredicted RBP7.43□□□□□ -1.22
CHFR-211ENST00000535897 LRRN4CLQ8ND94 238 aa7.43□□□□□ -1.22
CHFR-211ENST00000535897 MORN4Q8NDC4 146 aa7.43□□□□□ -1.22
CHFR-211ENST00000535897 TMEM52Q8NDY8 209 aa7.43□□□□□ -1.22
CHFR-211ENST00000535897 OR5L2Q8NGL0 311 aa7.43□□□□□ -1.22
CHFR-211ENST00000535897 RNASE6Q93091 150 aaKnown RBP7.43□□□□□ -1.22
CHFR-211ENST00000535897 SMIM10Q96HG1 83 aa7.43□□□□□ -1.22
CHFR-211ENST00000535897 CAPZA3Q96KX2 299 aa7.43□□□□□ -1.22
CHFR-211ENST00000535897 SGCZQ96LD1 299 aa7.43□□□□□ -1.22
CHFR-211ENST00000535897 NPLQ9BXD5 320 aaPredicted RBP7.43□□□□□ -1.22
CHFR-211ENST00000535897 ALOXE3Q9BYJ1 711 aa7.43□□□□□ -1.22
CHFR-211ENST00000535897 NEUROD4Q9HD90 331 aa7.43□□□□□ -1.22
CHFR-211ENST00000535897 SEMA4BQ9NPR2 832 aaPredicted RBP7.43□□□□□ -1.22
CHFR-211ENST00000535897 PPANQ9NQ55 473 aaKnown RBP7.43□□□□□ -1.22
CHFR-211ENST00000535897 MTRF1LQ9UGC7 380 aaKnown RBP7.43□□□□□ -1.22
CHFR-211ENST00000535897 BOKQ9UMX3 212 aaPredicted RBP7.43□□□□□ -1.22
CHFR-211ENST00000535897 SEC23IPQ9Y6Y8 1000 aaKnown RBP7.43□□□□□ -1.22
CHFR-211ENST00000535897 VPS13CQ709C8 3753 aa7.42□□□□□ -1.22
CHFR-211ENST00000535897 C15orf38-AP3S2A0A0A6YYH1 394 aa7.42□□□□□ -1.22
CHFR-211ENST00000535897 SYNDIG1LA6NDD5 238 aa7.42□□□□□ -1.22
CHFR-211ENST00000535897 WDR47O94967 919 aa7.42□□□□□ -1.22
CHFR-211ENST00000535897 ATE1O95260 518 aa7.42□□□□□ -1.22
CHFR-211ENST00000535897 COX7A2P14406 83 aa7.42□□□□□ -1.22
CHFR-211ENST00000535897 PGAM1P18669 254 aa7.42□□□□□ -1.22
CHFR-211ENST00000535897 GNAZP19086 355 aa7.42□□□□□ -1.22
CHFR-211ENST00000535897 ENDOUP21128 410 aaKnown RBP7.42□□□□□ -1.22
CHFR-211ENST00000535897 CERS1P27544 350 aa7.42□□□□□ -1.22
CHFR-211ENST00000535897 HNRNPH1P31943 449 aaKnown RBP7.42□□□□□ -1.22
CHFR-211ENST00000535897 HPDP32754 393 aaPredicted RBP7.42□□□□□ -1.22
CHFR-211ENST00000535897 TRPC1P48995 793 aa7.42□□□□□ -1.22
CHFR-211ENST00000535897 WNT3P56703 355 aa7.42□□□□□ -1.22
CHFR-211ENST00000535897 FOXO1Q12778 655 aa7.42□□□□□ -1.22
CHFR-211ENST00000535897 ASPHQ12797 758 aa7.42□□□□□ -1.22
CHFR-211ENST00000535897 SLBPQ14493 270 aaKnown RBP eCLIP7.42□□□□□ -1.22
CHFR-211ENST00000535897 CRYMQ14894 314 aa7.42□□□□□ -1.22
CHFR-211ENST00000535897 HYAL4Q2M3T9 481 aa7.42□□□□□ -1.22
CHFR-211ENST00000535897 SLC22A10Q63ZE4 541 aa7.42□□□□□ -1.22
CHFR-211ENST00000535897 TMEM198Q66K66 360 aa7.42□□□□□ -1.22
CHFR-211ENST00000535897 TMIGD1Q6UXZ0 262 aa7.42□□□□□ -1.22
CHFR-211ENST00000535897 CHSY3Q70JA7 882 aa7.42□□□□□ -1.22
CHFR-211ENST00000535897 FRA10AC1Q70Z53 315 aa7.42□□□□□ -1.22
CHFR-211ENST00000535897 KIF18BQ86Y91 864 aa7.42□□□□□ -1.22
CHFR-211ENST00000535897 ULK2Q8IYT8 1036 aa7.42□□□□□ -1.22
CHFR-211ENST00000535897 AGGF1Q8N302 714 aaeCLIP7.42□□□□□ -1.22
CHFR-211ENST00000535897 ZNF321PQ8N8H1 164 aa7.42□□□□□ -1.22
CHFR-211ENST00000535897 RELL2Q8NC24 303 aaPredicted RBP7.42□□□□□ -1.22
CHFR-211ENST00000535897 FAM13CQ8NE31 585 aa7.42□□□□□ -1.22
CHFR-211ENST00000535897 MCUQ8NE86 351 aa7.42□□□□□ -1.22
CHFR-211ENST00000535897 TNIP2Q8NFZ5 429 aa7.42□□□□□ -1.22
CHFR-211ENST00000535897 TTLQ8NG68 377 aa7.42□□□□□ -1.22
CHFR-211ENST00000535897 OR2L5Q8NG80 312 aa7.42□□□□□ -1.22
CHFR-211ENST00000535897 SLC2A12Q8TD20 617 aa7.42□□□□□ -1.22
CHFR-211ENST00000535897 PTPMT1Q8WUK0 201 aaPredicted RBP7.42□□□□□ -1.22
CHFR-211ENST00000535897 NUDT8Q8WV74 236 aa7.42□□□□□ -1.22
CHFR-211ENST00000535897 MS4A6EQ96DS6 147 aa7.42□□□□□ -1.22
CHFR-211ENST00000535897 SERINC2Q96SA4 455 aa7.42□□□□□ -1.22
CHFR-211ENST00000535897 CSF3RQ99062 836 aa7.42□□□□□ -1.22
CHFR-211ENST00000535897 SH3GL2Q99962 352 aa7.42□□□□□ -1.22
CHFR-211ENST00000535897 YIPF4Q9BSR8 244 aa7.42□□□□□ -1.22
CHFR-211ENST00000535897 REXO4Q9GZR2 422 aaKnown RBP7.42□□□□□ -1.22
CHFR-211ENST00000535897 AICDAQ9GZX7 198 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms