RNA–Protein interactions for RNA: ENST00000535789.1

ATL3-202, Transcript of atlastin GTPase 3, humanhuman

TSL 4

Gene ATL3, Length 828 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-202ENST00000535789 A0A1W2PPM1 405 aa15.32■□□□□ 0.04
ATL3-202ENST00000535789 OR5H15A6NDH6 313 aa15.32■□□□□ 0.04
ATL3-202ENST00000535789 A8MT66 165 aa15.32■□□□□ 0.04
ATL3-202ENST00000535789 A8MUI8 341 aa15.32■□□□□ 0.04
ATL3-202ENST00000535789 H0YIV9 168 aa15.32■□□□□ 0.04
ATL3-202ENST00000535789 STX16-NPEPL1H3BU86 382 aa15.32■□□□□ 0.04
ATL3-202ENST00000535789 PSMD12O00232 456 aaPredicted RBP15.32■□□□□ 0.04
ATL3-202ENST00000535789 PPP6CO00743 305 aa15.32■□□□□ 0.04
ATL3-202ENST00000535789 PLPP1O14494 284 aa15.32■□□□□ 0.04
ATL3-202ENST00000535789 STX16O14662 325 aa15.32■□□□□ 0.04
ATL3-202ENST00000535789 KRT15P19012 456 aa15.32■□□□□ 0.04
ATL3-202ENST00000535789 TDGF1P3P51864 188 aa15.32■□□□□ 0.04
ATL3-202ENST00000535789 RPS13P62277 151 aaKnown RBP15.32■□□□□ 0.04
ATL3-202ENST00000535789 EIF2S3LQ2VIR3 472 aaKnown RBP15.32■□□□□ 0.04
ATL3-202ENST00000535789 ZNF468Q5VIY5 522 aaPredicted RBP15.32■□□□□ 0.04
ATL3-202ENST00000535789 ABHD17BQ5VST6 288 aa15.32■□□□□ 0.04
ATL3-202ENST00000535789 KHDRBS2Q5VWX1 349 aaKnown RBP15.32■□□□□ 0.04
ATL3-202ENST00000535789 ZNF324BQ6AW86 544 aaPredicted RBP15.32■□□□□ 0.04
ATL3-202ENST00000535789 ZNF227Q86WZ6 799 aa15.32■□□□□ 0.04
ATL3-202ENST00000535789 FAM26EQ8N5C1 309 aa15.32■□□□□ 0.04
ATL3-202ENST00000535789 GOLGA6L1Q8N7Z2 621 aa15.32■□□□□ 0.04
ATL3-202ENST00000535789 ACOT4Q8N9L9 421 aa15.32■□□□□ 0.04
ATL3-202ENST00000535789 L3MBTL4Q8NA19 623 aa15.32■□□□□ 0.04
ATL3-202ENST00000535789 MDS2Q8NDY4 140 aa15.32■□□□□ 0.04
ATL3-202ENST00000535789 KCNC2Q96PR1 638 aa15.32■□□□□ 0.04
ATL3-202ENST00000535789 SLX1AQ9BQ83 275 aa15.32■□□□□ 0.04
ATL3-202ENST00000535789 PRTFDC1Q9NRG1 225 aa15.32■□□□□ 0.04
ATL3-202ENST00000535789 ANKRD10Q9NXR5 420 aa15.32■□□□□ 0.04
ATL3-202ENST00000535789 FAM53CQ9NYF3 392 aa15.32■□□□□ 0.04
ATL3-202ENST00000535789 GTF3C1Q12789 2109 aa15.32■□□□□ 0.04
ATL3-202ENST00000535789 DYTNA2CJ06 578 aa15.31■□□□□ 0.04
ATL3-202ENST00000535789 PRKNO60260 465 aaPredicted RBP15.31■□□□□ 0.04
ATL3-202ENST00000535789 PRKRAO75569 313 aaKnown RBP15.31■□□□□ 0.04
ATL3-202ENST00000535789 WISP2O76076 250 aa15.31■□□□□ 0.04
ATL3-202ENST00000535789 RBP1P09455 135 aa15.31■□□□□ 0.04
ATL3-202ENST00000535789 COL6A2P12110 1019 aa15.31■□□□□ 0.04
ATL3-202ENST00000535789 HIST1H1TP22492 207 aaPredicted RBP15.31■□□□□ 0.04
ATL3-202ENST00000535789 GPR143P51810 404 aa15.31■□□□□ 0.04
ATL3-202ENST00000535789 HNRNPH2P55795 449 aaKnown RBP15.31■□□□□ 0.04
ATL3-202ENST00000535789 HSD17B7P56937 341 aa15.31■□□□□ 0.04
ATL3-202ENST00000535789 PMP22Q01453 160 aa15.31■□□□□ 0.04
ATL3-202ENST00000535789 ACTN3Q08043 901 aaPredicted RBP15.31■□□□□ 0.04
ATL3-202ENST00000535789 TUBA3CQ13748 450 aa15.31■□□□□ 0.04
ATL3-202ENST00000535789 CPSF6Q16630 551 aaKnown RBP eCLIP15.31■□□□□ 0.04
ATL3-202ENST00000535789 HIST2H2ACQ16777 129 aaPredicted RBP15.31■□□□□ 0.04
ATL3-202ENST00000535789 TSNAXIP1Q2TAA8 658 aa15.31■□□□□ 0.04
ATL3-202ENST00000535789 DEPDC1Q5TB30 811 aa15.31■□□□□ 0.04
ATL3-202ENST00000535789 LIPJQ5W064 366 aa15.31■□□□□ 0.04
ATL3-202ENST00000535789 HIST2H2AA3Q6FI13 130 aa15.31■□□□□ 0.04
ATL3-202ENST00000535789 RPUSD3Q6P087 351 aaKnown RBP15.31■□□□□ 0.04
ATL3-202ENST00000535789 TUBA3EQ6PEY2 450 aa15.31■□□□□ 0.04
ATL3-202ENST00000535789 EXOC3L1Q86VI1 746 aa15.31■□□□□ 0.04
ATL3-202ENST00000535789 MYLK4Q86YV6 388 aaPredicted RBP15.31■□□□□ 0.04
ATL3-202ENST00000535789 ZNF483Q8TF39 744 aaPredicted RBP15.31■□□□□ 0.04
ATL3-202ENST00000535789 UBE2E3Q969T4 207 aa15.31■□□□□ 0.04
ATL3-202ENST00000535789 SCYL1Q96KG9 808 aa15.31■□□□□ 0.04
ATL3-202ENST00000535789 STMN4Q9H169 189 aaPredicted RBP15.31■□□□□ 0.04
ATL3-202ENST00000535789 MRPL46Q9H2W6 279 aaKnown RBP15.31■□□□□ 0.04
ATL3-202ENST00000535789 NOL11Q9H8H0 719 aaKnown RBP15.31■□□□□ 0.04
ATL3-202ENST00000535789 ACTR8Q9H981 624 aa15.31■□□□□ 0.04
ATL3-202ENST00000535789 COPS7BQ9H9Q2 264 aaPredicted RBP15.31■□□□□ 0.04
ATL3-202ENST00000535789 TMEM216Q9P0N5 145 aa15.31■□□□□ 0.04
ATL3-202ENST00000535789 ZNF225Q9UK10 706 aa15.31■□□□□ 0.04
ATL3-202ENST00000535789 PPIEQ9UNP9 301 aaKnown RBP15.31■□□□□ 0.04
ATL3-202ENST00000535789 ANGPTL3Q9Y5C1 460 aa15.31■□□□□ 0.04
ATL3-202ENST00000535789 ACTL7BQ9Y614 415 aa15.31■□□□□ 0.04
ATL3-202ENST00000535789 TRAV17A0A0B4J275 112 aa15.3■□□□□ 0.04
ATL3-202ENST00000535789 HMGB1P1B2RPK0 211 aaPredicted RBP15.3■□□□□ 0.04
ATL3-202ENST00000535789 UGDHO60701 494 aa15.3■□□□□ 0.04
ATL3-202ENST00000535789 LDB3O75112 727 aa15.3■□□□□ 0.04
ATL3-202ENST00000535789 EEDO75530 441 aaKnown RBP15.3■□□□□ 0.04
ATL3-202ENST00000535789 MYO1DO94832 1006 aa15.3■□□□□ 0.04
ATL3-202ENST00000535789 CREB1P16220 341 aa15.3■□□□□ 0.04
ATL3-202ENST00000535789 TPP2P29144 1249 aaPredicted RBP15.3■□□□□ 0.04
ATL3-202ENST00000535789 SERPINB1P30740 379 aa15.3■□□□□ 0.04
ATL3-202ENST00000535789 PIK3CBP42338 1070 aa15.3■□□□□ 0.04
ATL3-202ENST00000535789 NEK2P51955 445 aa15.3■□□□□ 0.04
ATL3-202ENST00000535789 MAGOHP61326 146 aaKnown RBP15.3■□□□□ 0.04
ATL3-202ENST00000535789 AP2B1P63010 937 aa15.3■□□□□ 0.04
ATL3-202ENST00000535789 ID2Q02363 134 aa15.3■□□□□ 0.04
ATL3-202ENST00000535789 SLC18A2Q05940 514 aa15.3■□□□□ 0.04
ATL3-202ENST00000535789 ZRSR2Q15696 482 aaKnown RBP15.3■□□□□ 0.04
ATL3-202ENST00000535789 METTL2BQ6P1Q9 378 aaKnown RBP15.3■□□□□ 0.04
ATL3-202ENST00000535789 SRRM1Q8IYB3 904 aaKnown RBP15.3■□□□□ 0.04
ATL3-202ENST00000535789 ZNF595Q8IYB9 648 aa15.3■□□□□ 0.04
ATL3-202ENST00000535789 ARMC10Q8N2F6 343 aa15.3■□□□□ 0.04
ATL3-202ENST00000535789 ZNF321PQ8N8H1 164 aa15.3■□□□□ 0.04
ATL3-202ENST00000535789 ADAMTS18Q8TE60 1221 aa15.3■□□□□ 0.04
ATL3-202ENST00000535789 FAR1Q8WVX9 515 aa15.3■□□□□ 0.04
ATL3-202ENST00000535789 CMTM7Q96FZ5 175 aa15.3■□□□□ 0.04
ATL3-202ENST00000535789 MRPL57Q9BQC6 102 aaKnown RBP15.3■□□□□ 0.04
ATL3-202ENST00000535789 TBCDQ9BTW9 1192 aa15.3■□□□□ 0.04
ATL3-202ENST00000535789 SLC29A3Q9BZD2 475 aa15.3■□□□□ 0.04
ATL3-202ENST00000535789 LYRM4Q9HD34 91 aa15.3■□□□□ 0.04
ATL3-202ENST00000535789 STMN3Q9NZ72 180 aa15.3■□□□□ 0.04
ATL3-202ENST00000535789 SENP1Q9P0U3 644 aa15.3■□□□□ 0.04
ATL3-202ENST00000535789 A0A088AWK7 358 aa15.29■□□□□ 0.04
ATL3-202ENST00000535789 TMEM200CA6NKL6 621 aa15.29■□□□□ 0.04
ATL3-202ENST00000535789 GABRR3A8MPY1 467 aa15.29■□□□□ 0.04
ATL3-202ENST00000535789 GOLGA8RI6L899 631 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms