RNA–Protein interactions for RNA: ENST00000535504.1

SSPN-204, Transcript of sarcospan, humanhuman

TSL 1 (best) BASIC

Gene SSPN, Length 419 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSPN-204ENST00000535504 TRIM13O60858 407 aa20.52■□□□□ 0.88
SSPN-204ENST00000535504 CTNSO60931 367 aa20.52■□□□□ 0.88
SSPN-204ENST00000535504 SPAG7O75391 227 aa20.52■□□□□ 0.88
SSPN-204ENST00000535504 COX7A2P14406 83 aa20.52■□□□□ 0.88
SSPN-204ENST00000535504 ZNF844Q08AG5 666 aa20.52■□□□□ 0.88
SSPN-204ENST00000535504 BIKQ13323 160 aa20.52■□□□□ 0.88
SSPN-204ENST00000535504 LRIG3Q6UXM1 1119 aa20.52■□□□□ 0.88
SSPN-204ENST00000535504 UBE3DQ7Z6J8 389 aa20.52■□□□□ 0.88
SSPN-204ENST00000535504 BRIX1Q8TDN6 353 aaKnown RBP20.52■□□□□ 0.88
SSPN-204ENST00000535504 IMMP1LQ96LU5 166 aa20.52■□□□□ 0.88
SSPN-204ENST00000535504 FAM111AQ96PZ2 611 aa20.52■□□□□ 0.88
SSPN-204ENST00000535504 LMF1Q96S06 567 aa20.52■□□□□ 0.88
SSPN-204ENST00000535504 MAPKAP1Q9BPZ7 522 aa20.52■□□□□ 0.88
SSPN-204ENST00000535504 ILKAPQ9H0C8 392 aaPredicted RBP20.52■□□□□ 0.88
SSPN-204ENST00000535504 PNO1Q9NRX1 252 aaKnown RBP20.52■□□□□ 0.88
SSPN-204ENST00000535504 ADAM29Q9UKF5 820 aa20.52■□□□□ 0.88
SSPN-204ENST00000535504 TCRBV16S1A1N1A0A5B0 115 aa20.51■□□□□ 0.87
SSPN-204ENST00000535504 PDYNP01213 254 aa20.51■□□□□ 0.87
SSPN-204ENST00000535504 PDGFAP04085 211 aa20.51■□□□□ 0.87
SSPN-204ENST00000535504 TNNI3P19429 210 aa20.51■□□□□ 0.87
SSPN-204ENST00000535504 CASRP41180 1078 aa20.51■□□□□ 0.87
SSPN-204ENST00000535504 ARG2P78540 354 aa20.51■□□□□ 0.87
SSPN-204ENST00000535504 CSTF3Q12996 717 aaKnown RBP20.51■□□□□ 0.87
SSPN-204ENST00000535504 MFAP5Q13361 173 aa20.51■□□□□ 0.87
SSPN-204ENST00000535504 FRMD7Q6ZUT3 714 aa20.51■□□□□ 0.87
SSPN-204ENST00000535504 CLNKQ7Z7G1 428 aa20.51■□□□□ 0.87
SSPN-204ENST00000535504 SCUBE1Q8IWY4 988 aa20.51■□□□□ 0.87
SSPN-204ENST00000535504 TMEM132CQ8N3T6 1108 aa20.51■□□□□ 0.87
SSPN-204ENST00000535504 SLC5A8Q8N695 610 aa20.51■□□□□ 0.87
SSPN-204ENST00000535504 SIRT6Q8N6T7 355 aa20.51■□□□□ 0.87
SSPN-204ENST00000535504 GBP7Q8N8V2 638 aaPredicted RBP20.51■□□□□ 0.87
SSPN-204ENST00000535504 MESP1Q9BRJ9 268 aa20.51■□□□□ 0.87
SSPN-204ENST00000535504 TRMOQ9BU70 441 aa20.51■□□□□ 0.87
SSPN-204ENST00000535504 DDX31Q9H8H2 851 aaKnown RBP20.51■□□□□ 0.87
SSPN-204ENST00000535504 MMP25Q9NPA2 562 aa20.51■□□□□ 0.87
SSPN-204ENST00000535504 ADAP2Q9NPF8 381 aa20.51■□□□□ 0.87
SSPN-204ENST00000535504 SAGE2PA6NJ88 616 aa20.5■□□□□ 0.87
SSPN-204ENST00000535504 TTLL8A6PVC2 850 aa20.5■□□□□ 0.87
SSPN-204ENST00000535504 A8MUI8 341 aa20.5■□□□□ 0.87
SSPN-204ENST00000535504 K7EM74 188 aa20.5■□□□□ 0.87
SSPN-204ENST00000535504 MANBAO00462 879 aa20.5■□□□□ 0.87
SSPN-204ENST00000535504 CYR61O00622 381 aa20.5■□□□□ 0.87
SSPN-204ENST00000535504 PPP6CO00743 305 aa20.5■□□□□ 0.87
SSPN-204ENST00000535504 CTIFO43310 598 aaKnown RBP20.5■□□□□ 0.87
SSPN-204ENST00000535504 SUV39H1O43463 412 aa20.5■□□□□ 0.87
SSPN-204ENST00000535504 CHEK2O96017 543 aa20.5■□□□□ 0.87
SSPN-204ENST00000535504 FAM58BPP0C7Q3 252 aa20.5■□□□□ 0.87
SSPN-204ENST00000535504 SLC26A5P58743 744 aa20.5■□□□□ 0.87
SSPN-204ENST00000535504 TNFRSF17Q02223 184 aa20.5■□□□□ 0.87
SSPN-204ENST00000535504 Q0VFX4 171 aa20.5■□□□□ 0.87
SSPN-204ENST00000535504 TERF2Q15554 542 aa20.5■□□□□ 0.87
SSPN-204ENST00000535504 IMPG1Q17R60 797 aa20.5■□□□□ 0.87
SSPN-204ENST00000535504 CCNYL2Q5T2Q4 361 aa20.5■□□□□ 0.87
SSPN-204ENST00000535504 IGFL3Q6UXB1 125 aa20.5■□□□□ 0.87
SSPN-204ENST00000535504 LINC00696Q6ZRV3 163 aa20.5■□□□□ 0.87
SSPN-204ENST00000535504 C10orf107Q8IVU9 208 aa20.5■□□□□ 0.87
SSPN-204ENST00000535504 PPP1R14CQ8TAE6 165 aa20.5■□□□□ 0.87
SSPN-204ENST00000535504 SUN3Q8TAQ9 357 aa20.5■□□□□ 0.87
SSPN-204ENST00000535504 TCP10LQ8TDR4 215 aa20.5■□□□□ 0.87
SSPN-204ENST00000535504 TANKQ92844 425 aa20.5■□□□□ 0.87
SSPN-204ENST00000535504 DAZLQ92904 295 aaKnown RBP20.5■□□□□ 0.87
SSPN-204ENST00000535504 PNPLA2Q96AD5 504 aa20.5■□□□□ 0.87
SSPN-204ENST00000535504 CNDP1Q96KN2 507 aa20.5■□□□□ 0.87
SSPN-204ENST00000535504 ZNF354BQ96LW1 612 aa20.5■□□□□ 0.87
SSPN-204ENST00000535504 ZIM3Q96PE6 472 aa20.5■□□□□ 0.87
SSPN-204ENST00000535504 CSF3RQ99062 836 aa20.5■□□□□ 0.87
SSPN-204ENST00000535504 WDR77Q9BQA1 342 aaPredicted RBP20.5■□□□□ 0.87
SSPN-204ENST00000535504 SORBS1Q9BX66 1292 aaKnown RBP20.5■□□□□ 0.87
SSPN-204ENST00000535504 MFRPQ9BY79 579 aa20.5■□□□□ 0.87
SSPN-204ENST00000535504 GSTO2Q9H4Y5 243 aa20.5■□□□□ 0.87
SSPN-204ENST00000535504 RPF2Q9H7B2 306 aaKnown RBP20.5■□□□□ 0.87
SSPN-204ENST00000535504 EML4Q9HC35 981 aaKnown RBP20.5■□□□□ 0.87
SSPN-204ENST00000535504 NECTIN3Q9NQS3 549 aa20.5■□□□□ 0.87
SSPN-204ENST00000535504 ARGLU1Q9NWB6 273 aaPredicted RBP20.5■□□□□ 0.87
SSPN-204ENST00000535504 VPS29Q9UBQ0 182 aa20.5■□□□□ 0.87
SSPN-204ENST00000535504 CLCA3PQ9Y6N3 262 aa20.5■□□□□ 0.87
SSPN-204ENST00000535504 TNRC6AQ8NDV7 1962 aaKnown RBP20.5■□□□□ 0.87
SSPN-204ENST00000535504 PCSK5Q92824 1860 aa20.5■□□□□ 0.87
SSPN-204ENST00000535504 IGKV3D-11A0A0A0MRZ8 115 aa20.49■□□□□ 0.87
SSPN-204ENST00000535504 A8MUA0 341 aa20.49■□□□□ 0.87
SSPN-204ENST00000535504 MYO1DO94832 1006 aa20.49■□□□□ 0.87
SSPN-204ENST00000535504 NR2F6P10588 404 aa20.49■□□□□ 0.87
SSPN-204ENST00000535504 ITGAMP11215 1152 aa20.49■□□□□ 0.87
SSPN-204ENST00000535504 MAPK12P53778 367 aa20.49■□□□□ 0.87
SSPN-204ENST00000535504 DNAJB14Q8TBM8 379 aa20.49■□□□□ 0.87
SSPN-204ENST00000535504 AGAP11Q8TF27 550 aa20.49■□□□□ 0.87
SSPN-204ENST00000535504 PELOQ9BRX2 385 aaKnown RBP20.49■□□□□ 0.87
SSPN-204ENST00000535504 ALOXE3Q9BYJ1 711 aa20.49■□□□□ 0.87
SSPN-204ENST00000535504 KCMF1Q9P0J7 381 aa20.49■□□□□ 0.87
SSPN-204ENST00000535504 B3GNT3Q9Y2A9 372 aa20.49■□□□□ 0.87
SSPN-204ENST00000535504 DOCK10Q96BY6 2186 aa20.48■□□□□ 0.87
SSPN-204ENST00000535504 A0A0A6YYD5 115 aa20.48■□□□□ 0.87
SSPN-204ENST00000535504 ETHE1O95571 254 aa20.48■□□□□ 0.87
SSPN-204ENST00000535504 KLK1P06870 262 aa20.48■□□□□ 0.87
SSPN-204ENST00000535504 BSGP35613 385 aa20.48■□□□□ 0.87
SSPN-204ENST00000535504 EFNA3P52797 238 aa20.48■□□□□ 0.87
SSPN-204ENST00000535504 PLIN5Q00G26 463 aa20.48■□□□□ 0.87
SSPN-204ENST00000535504 PCLAFQ15004 111 aa20.48■□□□□ 0.87
SSPN-204ENST00000535504 ELAVL1Q15717 326 aaKnown RBP20.48■□□□□ 0.87
SSPN-204ENST00000535504 MEP1AQ16819 746 aa20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms