RNA–Protein interactions for RNA: ENST00000535399.1

SFSWAP-204, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 778 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-204ENST00000535399 PRR35P0CG20 571 aa21.32■■□□□ 1
SFSWAP-204ENST00000535399 HNRNPH2P55795 449 aaKnown RBP21.32■■□□□ 1
SFSWAP-204ENST00000535399 HSD17B7P56937 341 aa21.32■■□□□ 1
SFSWAP-204ENST00000535399 TBL3Q12788 808 aaKnown RBP21.32■■□□□ 1
SFSWAP-204ENST00000535399 CASP8Q14790 479 aa21.32■■□□□ 1
SFSWAP-204ENST00000535399 PAPD4Q6PIY7 484 aaKnown RBP21.32■■□□□ 1
SFSWAP-204ENST00000535399 METTL4Q8N3J2 472 aa21.32■■□□□ 1
SFSWAP-204ENST00000535399 ASB4Q9Y574 426 aa21.32■■□□□ 1
SFSWAP-204ENST00000535399 NUP210LQ5VU65 1888 aa21.31■■□□□ 1
SFSWAP-204ENST00000535399 CTNSO60931 367 aa21.31■■□□□ 1
SFSWAP-204ENST00000535399 ULK1O75385 1050 aa21.31■■□□□ 1
SFSWAP-204ENST00000535399 BPGMP07738 259 aa21.31■■□□□ 1
SFSWAP-204ENST00000535399 HSD3B1P14060 373 aa21.31■■□□□ 1
SFSWAP-204ENST00000535399 CHN1P15882 459 aa21.31■■□□□ 1
SFSWAP-204ENST00000535399 CPN2P22792 545 aa21.31■■□□□ 1
SFSWAP-204ENST00000535399 HSD3B2P26439 372 aa21.31■■□□□ 1
SFSWAP-204ENST00000535399 ACTN3Q08043 901 aaPredicted RBP21.31■■□□□ 1
SFSWAP-204ENST00000535399 ASPHQ12797 758 aa21.31■■□□□ 1
SFSWAP-204ENST00000535399 PLAG1Q6DJT9 500 aa21.31■■□□□ 1
SFSWAP-204ENST00000535399 RIPOR1Q6ZS17 1223 aa21.31■■□□□ 1
SFSWAP-204ENST00000535399 GPR180Q86V85 440 aa21.31■■□□□ 1
SFSWAP-204ENST00000535399 NUDT13Q86X67 352 aa21.31■■□□□ 1
SFSWAP-204ENST00000535399 PTRH1Q86Y79 214 aaKnown RBP21.31■■□□□ 1
SFSWAP-204ENST00000535399 PSMF1Q92530 271 aa21.31■■□□□ 1
SFSWAP-204ENST00000535399 CNDP1Q96KN2 507 aa21.31■■□□□ 1
SFSWAP-204ENST00000535399 TRMOQ9BU70 441 aa21.31■■□□□ 1
SFSWAP-204ENST00000535399 SHCBP1LQ9BZQ2 653 aa21.31■■□□□ 1
SFSWAP-204ENST00000535399 AHSPQ9NZD4 102 aa21.31■■□□□ 1
SFSWAP-204ENST00000535399 PHF11Q9UIL8 331 aa21.31■■□□□ 1
SFSWAP-204ENST00000535399 ADAM29Q9UKF5 820 aa21.31■■□□□ 1
SFSWAP-204ENST00000535399 ATG4BQ9Y4P1 393 aa21.31■■□□□ 1
SFSWAP-204ENST00000535399 SPACA6W5XKT8 324 aa21.31■■□□□ 1
SFSWAP-204ENST00000535399 KLHL41O60662 606 aa21.3■■□□□ 1
SFSWAP-204ENST00000535399 GBAP04062 536 aa21.3■■□□□ 1
SFSWAP-204ENST00000535399 KLK1P06870 262 aa21.3■■□□□ 1
SFSWAP-204ENST00000535399 FAM58BPP0C7Q3 252 aa21.3■■□□□ 1
SFSWAP-204ENST00000535399 MYZAPP0CAP1 466 aa21.3■■□□□ 1
SFSWAP-204ENST00000535399 ICAM2P13598 275 aa21.3■■□□□ 1
SFSWAP-204ENST00000535399 ZNF33BQ06732 778 aa21.3■■□□□ 1
SFSWAP-204ENST00000535399 GALNT1Q10472 559 aaPredicted RBP21.3■■□□□ 1
SFSWAP-204ENST00000535399 CSTF3Q12996 717 aaKnown RBP21.3■■□□□ 1
SFSWAP-204ENST00000535399 SLC13A2Q13183 592 aa21.3■■□□□ 1
SFSWAP-204ENST00000535399 C18orf63Q68DL7 685 aa21.3■■□□□ 1
SFSWAP-204ENST00000535399 COMMD6Q7Z4G1 85 aa21.3■■□□□ 1
SFSWAP-204ENST00000535399 CLNKQ7Z7G1 428 aa21.3■■□□□ 1
SFSWAP-204ENST00000535399 EFCAB3Q8N7B9 438 aa21.3■■□□□ 1
SFSWAP-204ENST00000535399 LPAR4Q99677 370 aa21.3■■□□□ 1
SFSWAP-204ENST00000535399 ACPTQ9BZG2 426 aa21.3■■□□□ 1
SFSWAP-204ENST00000535399 LYARQ9NX58 379 aaKnown RBP21.3■■□□□ 1
SFSWAP-204ENST00000535399 MS4A12Q9NXJ0 267 aa21.3■■□□□ 1
SFSWAP-204ENST00000535399 C5AR2Q9P296 337 aa21.3■■□□□ 1
SFSWAP-204ENST00000535399 VPS29Q9UBQ0 182 aa21.3■■□□□ 1
SFSWAP-204ENST00000535399 SERTM1A2A2V5 107 aa21.29■■□□□ 1
SFSWAP-204ENST00000535399 BLACEA4D250 179 aa21.29■■□□□ 1
SFSWAP-204ENST00000535399 PROM1O43490 865 aa21.29■■□□□ 1
SFSWAP-204ENST00000535399 NPHS1O60500 1241 aa21.29■■□□□ 1
SFSWAP-204ENST00000535399 ALPPP05187 535 aa21.29■■□□□ 1
SFSWAP-204ENST00000535399 ITGAMP11215 1152 aa21.29■■□□□ 1
SFSWAP-204ENST00000535399 TPP2P29144 1249 aaPredicted RBP21.29■■□□□ 1
SFSWAP-204ENST00000535399 PPP2R1BP30154 601 aa21.29■■□□□ 1
SFSWAP-204ENST00000535399 TNFRSF17Q02223 184 aa21.29■■□□□ 1
SFSWAP-204ENST00000535399 MPP2Q14168 576 aa21.29■■□□□ 1
SFSWAP-204ENST00000535399 EXT1Q16394 746 aa21.29■■□□□ 1
SFSWAP-204ENST00000535399 BTBD16Q32M84 506 aa21.29■■□□□ 1
SFSWAP-204ENST00000535399 IRAK1BP1Q5VVH5 260 aa21.29■■□□□ 1
SFSWAP-204ENST00000535399 CYP20A1Q6UW02 462 aa21.29■■□□□ 1
SFSWAP-204ENST00000535399 SCIMPQ6UWF3 145 aa21.29■■□□□ 1
SFSWAP-204ENST00000535399 GBP7Q8N8V2 638 aaPredicted RBP21.29■■□□□ 1
SFSWAP-204ENST00000535399 OR6Y1Q8NGX8 325 aa21.29■■□□□ 1
SFSWAP-204ENST00000535399 BRIX1Q8TDN6 353 aaKnown RBP21.29■■□□□ 1
SFSWAP-204ENST00000535399 ANKRD9Q96BM1 317 aaPredicted RBP21.29■■□□□ 1
SFSWAP-204ENST00000535399 TMBIM4Q9HC24 238 aa21.29■■□□□ 1
SFSWAP-204ENST00000535399 ZBTB20Q9HC78 741 aaPredicted RBP21.29■■□□□ 1
SFSWAP-204ENST00000535399 NMRK1Q9NWW6 199 aa21.29■■□□□ 1
SFSWAP-204ENST00000535399 A0A1W2PR48 441 aa21.28■■□□□ 1
SFSWAP-204ENST00000535399 SAGE2PA6NJ88 616 aa21.28■■□□□ 1
SFSWAP-204ENST00000535399 TM9SF1O15321 606 aa21.28■■□□□ 1
SFSWAP-204ENST00000535399 PRKRAO75569 313 aaKnown RBP21.28■■□□□ 1
SFSWAP-204ENST00000535399 CHRNGP07510 517 aa21.28■■□□□ 1
SFSWAP-204ENST00000535399 SERPINB3P29508 390 aa21.28■■□□□ 1
SFSWAP-204ENST00000535399 SERPINB4P48594 390 aa21.28■■□□□ 1
SFSWAP-204ENST00000535399 SLC26A5P58743 744 aa21.28■■□□□ 1
SFSWAP-204ENST00000535399 HMGCS1Q01581 520 aa21.28■■□□□ 1
SFSWAP-204ENST00000535399 AGAP7PQ5VUJ5 663 aa21.28■■□□□ 1
SFSWAP-204ENST00000535399 JMJD6Q6NYC1 403 aaPredicted RBP21.28■■□□□ 1
SFSWAP-204ENST00000535399 ZCCHC23Q6ZST2 131 aa21.28■■□□□ 1
SFSWAP-204ENST00000535399 PAGE2Q7Z2X7 111 aa21.28■■□□□ 1
SFSWAP-204ENST00000535399 CUZD1Q86UP6 607 aa21.28■■□□□ 1
SFSWAP-204ENST00000535399 M1APQ8TC57 530 aa21.28■■□□□ 1
SFSWAP-204ENST00000535399 CHTF18Q8WVB6 975 aa21.28■■□□□ 1
SFSWAP-204ENST00000535399 AGAP4Q96P64 663 aa21.28■■□□□ 1
SFSWAP-204ENST00000535399 STMN4Q9H169 189 aaPredicted RBP21.28■■□□□ 1
SFSWAP-204ENST00000535399 RPF2Q9H7B2 306 aaKnown RBP21.28■■□□□ 1
SFSWAP-204ENST00000535399 A8MUA0 341 aa21.27■■□□□ 1
SFSWAP-204ENST00000535399 B8ZZF3 427 aa21.27■■□□□ 1
SFSWAP-204ENST00000535399 LDB3O75112 727 aa21.27■■□□□ 1
SFSWAP-204ENST00000535399 CRCPO75575 148 aa21.27■■□□□ 1
SFSWAP-204ENST00000535399 DHRS4L1P0CG22 281 aa21.27■■□□□ 1
SFSWAP-204ENST00000535399 UROSP10746 265 aa21.27■■□□□ 1
SFSWAP-204ENST00000535399 H2AFXP16104 143 aaPredicted RBP21.27■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms