RNA–Protein interactions for RNA: ENST00000535375.1

PRKDC-205, Transcript of protein kinase, DNA-activated, catalytic subunit, human

TSL 3

Gene PRKDC, Length 464 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKDC-205	ENST00000535375	NLRP14	Q86W24	1093 aa		3.88	□□□□□ -1.79
PRKDC-205	ENST00000535375	OR8H3	Q8N146	312 aa		3.88	□□□□□ -1.79
PRKDC-205	ENST00000535375	CD177	Q8N6Q3	437 aa		3.88	□□□□□ -1.79
PRKDC-205	ENST00000535375	GOT1L1	Q8NHS2	421 aa	Predicted RBP	3.88	□□□□□ -1.79
PRKDC-205	ENST00000535375	DEPDC1B	Q8WUY9	529 aa		3.88	□□□□□ -1.79
PRKDC-205	ENST00000535375	CKAP2	Q8WWK9	683 aa		3.88	□□□□□ -1.79
PRKDC-205	ENST00000535375	FAM162A	Q96A26	154 aa		3.88	□□□□□ -1.79
PRKDC-205	ENST00000535375	C17orf62	Q9BQA9	187 aa		3.88	□□□□□ -1.79
PRKDC-205	ENST00000535375	CCM2	Q9BSQ5	444 aa		3.88	□□□□□ -1.79
PRKDC-205	ENST00000535375	CLEC5A	Q9NY25	188 aa		3.88	□□□□□ -1.79
PRKDC-205	ENST00000535375	GTF3C4	Q9UKN8	822 aa		3.88	□□□□□ -1.79
PRKDC-205	ENST00000535375	ZNF346	Q9UL40	294 aa	Known RBP	3.88	□□□□□ -1.79
PRKDC-205	ENST00000535375	SPATA2	Q9UM82	520 aa		3.88	□□□□□ -1.79
PRKDC-205	ENST00000535375	TMED7	Q9Y3B3	224 aa		3.88	□□□□□ -1.79
PRKDC-205	ENST00000535375	TEX48	A0A1B0GUV7	120 aa		3.87	□□□□□ -1.79
PRKDC-205	ENST00000535375	ANKDD1B	A6NHY2	528 aa		3.87	□□□□□ -1.79
PRKDC-205	ENST00000535375	CTDSPL	O15194	276 aa		3.87	□□□□□ -1.79
PRKDC-205	ENST00000535375	P2RX6	O15547	441 aa		3.87	□□□□□ -1.79
PRKDC-205	ENST00000535375	OR6B1	O95007	311 aa		3.87	□□□□□ -1.79
PRKDC-205	ENST00000535375	VDR	P11473	427 aa		3.87	□□□□□ -1.79
PRKDC-205	ENST00000535375	PPP2R1A	P30153	589 aa		3.87	□□□□□ -1.79
PRKDC-205	ENST00000535375	CTNNA1	P35221	906 aa	Known RBP	3.87	□□□□□ -1.79
PRKDC-205	ENST00000535375		Q1RN00	199 aa		3.87	□□□□□ -1.79
PRKDC-205	ENST00000535375	SLC10A5	Q5PT55	438 aa		3.87	□□□□□ -1.79
PRKDC-205	ENST00000535375	TEX35	Q5T0J7	233 aa		3.87	□□□□□ -1.79
PRKDC-205	ENST00000535375	LYPLAL1	Q5VWZ2	237 aa		3.87	□□□□□ -1.79
PRKDC-205	ENST00000535375	ARMCX5	Q6P1M9	558 aa		3.87	□□□□□ -1.79
PRKDC-205	ENST00000535375	TMEM64	Q6YI46	380 aa		3.87	□□□□□ -1.79
PRKDC-205	ENST00000535375	SERINC5	Q86VE9	423 aa		3.87	□□□□□ -1.79
PRKDC-205	ENST00000535375	ZNF444	Q8N0Y2	327 aa	Predicted RBP	3.87	□□□□□ -1.79
PRKDC-205	ENST00000535375	SIX6OS1	Q8N1H7	587 aa		3.87	□□□□□ -1.79
PRKDC-205	ENST00000535375	KLHL30-AS1	Q8NEE0	82 aa		3.87	□□□□□ -1.79
PRKDC-205	ENST00000535375	C8orf46	Q8TAG6	207 aa		3.87	□□□□□ -1.79
PRKDC-205	ENST00000535375	CNOT6L	Q96LI5	555 aa	Known RBP	3.87	□□□□□ -1.79
PRKDC-205	ENST00000535375	HSD17B14	Q9BPX1	270 aa		3.87	□□□□□ -1.79
PRKDC-205	ENST00000535375	RSPH9	Q9H1X1	276 aa	Predicted RBP	3.87	□□□□□ -1.79
PRKDC-205	ENST00000535375	LIME1	Q9H400	295 aa		3.87	□□□□□ -1.79
PRKDC-205	ENST00000535375	MED17	Q9NVC6	651 aa		3.87	□□□□□ -1.79
PRKDC-205	ENST00000535375	ARGLU1	Q9NWB6	273 aa	Predicted RBP	3.87	□□□□□ -1.79
PRKDC-205	ENST00000535375	ZNF319	Q9P2F9	582 aa		3.87	□□□□□ -1.79
PRKDC-205	ENST00000535375	NAALAD2	Q9Y3Q0	740 aa		3.87	□□□□□ -1.79
PRKDC-205	ENST00000535375	IFIT3	O14879	490 aa	Known RBP	3.86	□□□□□ -1.79
PRKDC-205	ENST00000535375	RAD51D	O75771	328 aa		3.86	□□□□□ -1.79
PRKDC-205	ENST00000535375	LETM1	O95202	739 aa	Predicted RBP	3.86	□□□□□ -1.79
PRKDC-205	ENST00000535375	SEMA4F	O95754	770 aa		3.86	□□□□□ -1.79
PRKDC-205	ENST00000535375	CCND3	P30281	292 aa	Predicted RBP	3.86	□□□□□ -1.79
PRKDC-205	ENST00000535375	IER3	P46695	156 aa		3.86	□□□□□ -1.79
PRKDC-205	ENST00000535375	FKBP1B	P68106	108 aa		3.86	□□□□□ -1.79
PRKDC-205	ENST00000535375	AKAP17A	Q02040	695 aa	Known RBP	3.86	□□□□□ -1.79
PRKDC-205	ENST00000535375	GPR50	Q13585	617 aa		3.86	□□□□□ -1.79
PRKDC-205	ENST00000535375	VWA2	Q5GFL6	755 aa		3.86	□□□□□ -1.79
PRKDC-205	ENST00000535375	LCE3E	Q5T5B0	92 aa		3.86	□□□□□ -1.79
PRKDC-205	ENST00000535375	FHL5	Q5TD97	284 aa		3.86	□□□□□ -1.79
PRKDC-205	ENST00000535375	RSBN1	Q5VWQ0	802 aa	Predicted RBP	3.86	□□□□□ -1.79
PRKDC-205	ENST00000535375	LIPJ	Q5W064	366 aa		3.86	□□□□□ -1.79
PRKDC-205	ENST00000535375	CLEC1A	Q8NC01	280 aa		3.86	□□□□□ -1.79
PRKDC-205	ENST00000535375	BEST4	Q8NFU0	473 aa		3.86	□□□□□ -1.79
PRKDC-205	ENST00000535375	RFT1	Q96AA3	541 aa		3.86	□□□□□ -1.79
PRKDC-205	ENST00000535375	VMP1	Q96GC9	406 aa		3.86	□□□□□ -1.79
PRKDC-205	ENST00000535375	JAKMIP1	Q96N16	626 aa	Known RBP	3.86	□□□□□ -1.79
PRKDC-205	ENST00000535375	C2orf40	Q9H1Z8	148 aa		3.86	□□□□□ -1.79
PRKDC-205	ENST00000535375	GPR173	Q9NS66	373 aa		3.86	□□□□□ -1.79
PRKDC-205	ENST00000535375	TNFRSF19	Q9NS68	423 aa		3.86	□□□□□ -1.79
PRKDC-205	ENST00000535375	B4GALT7	Q9UBV7	327 aa		3.86	□□□□□ -1.79
PRKDC-205	ENST00000535375	ETV7	Q9Y603	341 aa		3.86	□□□□□ -1.79
PRKDC-205	ENST00000535375	ZFP37	Q9Y6Q3	630 aa	Predicted RBP	3.86	□□□□□ -1.79
PRKDC-205	ENST00000535375	OR5H15	A6NDH6	313 aa		3.85	□□□□□ -1.79
PRKDC-205	ENST00000535375	NEDD8-MDP1	E9PL57	170 aa		3.85	□□□□□ -1.79
PRKDC-205	ENST00000535375	ST8SIA3	O43173	380 aa		3.85	□□□□□ -1.79
PRKDC-205	ENST00000535375	CALCA	P01258	141 aa		3.85	□□□□□ -1.79
PRKDC-205	ENST00000535375	BRCC3	P46736	316 aa		3.85	□□□□□ -1.79
PRKDC-205	ENST00000535375	PPIA	P62937	165 aa	Known RBP	3.85	□□□□□ -1.79
PRKDC-205	ENST00000535375	SLC3A1	Q07837	685 aa		3.85	□□□□□ -1.79
PRKDC-205	ENST00000535375	MPP7	Q5T2T1	576 aa		3.85	□□□□□ -1.79
PRKDC-205	ENST00000535375	MARC1	Q5VT66	337 aa		3.85	□□□□□ -1.79
PRKDC-205	ENST00000535375	REP15	Q6BDI9	236 aa		3.85	□□□□□ -1.79
PRKDC-205	ENST00000535375	NEPRO	Q6NW34	567 aa		3.85	□□□□□ -1.79
PRKDC-205	ENST00000535375	C11orf88	Q6PI97	169 aa		3.85	□□□□□ -1.79
PRKDC-205	ENST00000535375	NUFIP2	Q7Z417	695 aa	Known RBP	3.85	□□□□□ -1.79
PRKDC-205	ENST00000535375	ZNF781	Q8N8C0	355 aa		3.85	□□□□□ -1.79
PRKDC-205	ENST00000535375	GPR148	Q8TDV2	347 aa		3.85	□□□□□ -1.79
PRKDC-205	ENST00000535375	AFAP1L1	Q8TED9	768 aa		3.85	□□□□□ -1.79
PRKDC-205	ENST00000535375	CITED2	Q99967	270 aa	Predicted RBP	3.85	□□□□□ -1.79
PRKDC-205	ENST00000535375	SLCO1C1	Q9NYB5	712 aa		3.85	□□□□□ -1.79
PRKDC-205	ENST00000535375	VPS18	Q9P253	973 aa		3.85	□□□□□ -1.79
PRKDC-205	ENST00000535375	HCK	P08631	526 aa		3.84	□□□□□ -1.79
PRKDC-205	ENST00000535375	SKIL	P12757	684 aa		3.84	□□□□□ -1.79
PRKDC-205	ENST00000535375	TNNT3	P45378	269 aa	Predicted RBP	3.84	□□□□□ -1.79
PRKDC-205	ENST00000535375	ADAR	P55265	1226 aa	Known RBP	3.84	□□□□□ -1.79
PRKDC-205	ENST00000535375	GSTO1	P78417	241 aa		3.84	□□□□□ -1.79
PRKDC-205	ENST00000535375	IQCC	Q4KMZ1	466 aa		3.84	□□□□□ -1.79
PRKDC-205	ENST00000535375	ZNF730	Q6ZMV8	503 aa		3.84	□□□□□ -1.79
PRKDC-205	ENST00000535375	MSANTD1	Q6ZTZ1	278 aa		3.84	□□□□□ -1.79
PRKDC-205	ENST00000535375	UXS1	Q8NBZ7	420 aa		3.84	□□□□□ -1.79
PRKDC-205	ENST00000535375	GANC	Q8TET4	914 aa		3.84	□□□□□ -1.79
PRKDC-205	ENST00000535375	MR1	Q95460	341 aa		3.84	□□□□□ -1.79
PRKDC-205	ENST00000535375	ATP6V1E2	Q96A05	226 aa		3.84	□□□□□ -1.79
PRKDC-205	ENST00000535375	RBM18	Q96H35	190 aa	Known RBP	3.84	□□□□□ -1.79
PRKDC-205	ENST00000535375	PARK7	Q99497	189 aa	Known RBP	3.84	□□□□□ -1.79
PRKDC-205	ENST00000535375	DESI2	Q9BSY9	194 aa		3.84	□□□□□ -1.79

Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms