RNA–Protein interactions for RNA: ENST00000534705.5

USP48-215, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 566 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-215ENST00000534705 TXNL1O43396 289 aa3.12□□□□□ -1.91
USP48-215ENST00000534705 E2F6O75461 281 aa3.12□□□□□ -1.91
USP48-215ENST00000534705 DEXIO95424 95 aa3.12□□□□□ -1.91
USP48-215ENST00000534705 CCNE2O96020 404 aa3.12□□□□□ -1.91
USP48-215ENST00000534705 IGLV1-44P01699 117 aa3.12□□□□□ -1.91
USP48-215ENST00000534705 FYNP06241 537 aa3.12□□□□□ -1.91
USP48-215ENST00000534705 PAEPP09466 180 aa3.12□□□□□ -1.91
USP48-215ENST00000534705 FAM157CP0CG43 387 aa3.12□□□□□ -1.91
USP48-215ENST00000534705 CKMT2P17540 419 aa3.12□□□□□ -1.91
USP48-215ENST00000534705 CBLP22681 906 aa3.12□□□□□ -1.91
USP48-215ENST00000534705 CPT2P23786 658 aa3.12□□□□□ -1.91
USP48-215ENST00000534705 NMBRP28336 390 aa3.12□□□□□ -1.91
USP48-215ENST00000534705 CHRNB4P30926 498 aa3.12□□□□□ -1.91
USP48-215ENST00000534705 SLC15A1P46059 708 aa3.12□□□□□ -1.91
USP48-215ENST00000534705 LIMK1P53667 647 aa3.12□□□□□ -1.91
USP48-215ENST00000534705 NAPAP54920 295 aa3.12□□□□□ -1.91
USP48-215ENST00000534705 RPS18P62269 152 aaKnown RBP3.12□□□□□ -1.91
USP48-215ENST00000534705 ARF5P84085 180 aa3.12□□□□□ -1.91
USP48-215ENST00000534705 SULT2A1Q06520 285 aa3.12□□□□□ -1.91
USP48-215ENST00000534705 CAMK2DQ13557 499 aa3.12□□□□□ -1.91
USP48-215ENST00000534705 BCL2A1Q16548 175 aa3.12□□□□□ -1.91
USP48-215ENST00000534705 KBTBD12Q3ZCT8 623 aa3.12□□□□□ -1.91
USP48-215ENST00000534705 FAM98BQ52LJ0 330 aaKnown RBP3.12□□□□□ -1.91
USP48-215ENST00000534705 MARCH8Q5T0T0 291 aa3.12□□□□□ -1.91
USP48-215ENST00000534705 GRTP1Q5TC63 336 aa3.12□□□□□ -1.91
USP48-215ENST00000534705 CYB5D1Q6P9G0 228 aa3.12□□□□□ -1.91
USP48-215ENST00000534705 METTL7BQ6UX53 244 aa3.12□□□□□ -1.91
USP48-215ENST00000534705 C15orf39Q6ZRI6 1047 aa3.12□□□□□ -1.91
USP48-215ENST00000534705 MSANTD1Q6ZTZ1 278 aa3.12□□□□□ -1.91
USP48-215ENST00000534705 C11orf57Q6ZUT1 292 aaPredicted RBP3.12□□□□□ -1.91
USP48-215ENST00000534705 NIPA1Q7RTP0 329 aa3.12□□□□□ -1.91
USP48-215ENST00000534705 SERINC5Q86VE9 423 aa3.12□□□□□ -1.91
USP48-215ENST00000534705 MYOCDQ8IZQ8 938 aa3.12□□□□□ -1.91
USP48-215ENST00000534705 CPSF7Q8N684 471 aaKnown RBP3.12□□□□□ -1.91
USP48-215ENST00000534705 ERMNQ8TAM6 284 aa3.12□□□□□ -1.91
USP48-215ENST00000534705 WDR20Q8TBZ3 569 aa3.12□□□□□ -1.91
USP48-215ENST00000534705 MIPOL1Q8TD10 442 aa3.12□□□□□ -1.91
USP48-215ENST00000534705 KRT35Q92764 455 aa3.12□□□□□ -1.91
USP48-215ENST00000534705 MTERF3Q96E29 417 aa3.12□□□□□ -1.91
USP48-215ENST00000534705 CFAP57Q96MR6 1250 aa3.12□□□□□ -1.91
USP48-215ENST00000534705 MBOAT7Q96N66 472 aa3.12□□□□□ -1.91
USP48-215ENST00000534705 RUNDC3BQ96NL0 473 aa3.12□□□□□ -1.91
USP48-215ENST00000534705 TSGA13Q96PP4 275 aa3.12□□□□□ -1.91
USP48-215ENST00000534705 ATP6V0BQ99437 205 aa3.12□□□□□ -1.91
USP48-215ENST00000534705 SPXQ9BT56 116 aa3.12□□□□□ -1.91
USP48-215ENST00000534705 ABHD6Q9BV23 337 aa3.12□□□□□ -1.91
USP48-215ENST00000534705 EGLN1Q9GZT9 426 aa3.12□□□□□ -1.91
USP48-215ENST00000534705 HSD3B7Q9H2F3 369 aa3.12□□□□□ -1.91
USP48-215ENST00000534705 THAP9Q9H5L6 903 aa3.12□□□□□ -1.91
USP48-215ENST00000534705 OPA3Q9H6K4 179 aa3.12□□□□□ -1.91
USP48-215ENST00000534705 MID1IP1Q9NPA3 183 aa3.12□□□□□ -1.91
USP48-215ENST00000534705 MBNL1Q9NR56 388 aaKnown RBP3.12□□□□□ -1.91
USP48-215ENST00000534705 TAS2R14Q9NYV8 317 aa3.12□□□□□ -1.91
USP48-215ENST00000534705 FLRT3Q9NZU0 649 aa3.12□□□□□ -1.91
USP48-215ENST00000534705 C5AR2Q9P296 337 aa3.12□□□□□ -1.91
USP48-215ENST00000534705 CIDEBQ9UHD4 219 aa3.12□□□□□ -1.91
USP48-215ENST00000534705 SLC7A7Q9UM01 511 aa3.12□□□□□ -1.91
USP48-215ENST00000534705 DUSP12Q9UNI6 340 aa3.12□□□□□ -1.91
USP48-215ENST00000534705 LRRC42Q9Y546 428 aa3.12□□□□□ -1.91
USP48-215ENST00000534705 PCDHGA5Q9Y5G8 931 aa3.12□□□□□ -1.91
USP48-215ENST00000534705 TRPV2Q9Y5S1 764 aa3.12□□□□□ -1.91
USP48-215ENST00000534705 A0A0C4DFX4 3053 aa3.12□□□□□ -1.91
USP48-215ENST00000534705 MYO16Q9Y6X6 1858 aa3.11□□□□□ -1.91
USP48-215ENST00000534705 HELZP42694 1942 aaKnown RBP3.11□□□□□ -1.91
USP48-215ENST00000534705 MIA3Q5JRA6 1907 aa3.11□□□□□ -1.91
USP48-215ENST00000534705 TCRBV21S2A2A0A5A6 115 aa3.11□□□□□ -1.91
USP48-215ENST00000534705 LRRD1A4D1F6 860 aa3.11□□□□□ -1.91
USP48-215ENST00000534705 MBLAC1A4D2B0 266 aaPredicted RBP3.11□□□□□ -1.91
USP48-215ENST00000534705 KRT87PA6NCN2 255 aa3.11□□□□□ -1.91
USP48-215ENST00000534705 DUXAA6NLW8 204 aa3.11□□□□□ -1.91
USP48-215ENST00000534705 MAGEB17A8MXT2 336 aa3.11□□□□□ -1.91
USP48-215ENST00000534705 ZNF263O14978 683 aa3.11□□□□□ -1.91
USP48-215ENST00000534705 TO15178 435 aa3.11□□□□□ -1.91
USP48-215ENST00000534705 MSH4O15457 936 aa3.11□□□□□ -1.91
USP48-215ENST00000534705 ZSCAN12O43309 604 aa3.11□□□□□ -1.91
USP48-215ENST00000534705 SLC37A4O43826 429 aa3.11□□□□□ -1.91
USP48-215ENST00000534705 STX10O60499 249 aa3.11□□□□□ -1.91
USP48-215ENST00000534705 JAK2O60674 1132 aa3.11□□□□□ -1.91
USP48-215ENST00000534705 NOL3O60936 208 aaKnown RBP3.11□□□□□ -1.91
USP48-215ENST00000534705 ATP6V1G1O75348 118 aa3.11□□□□□ -1.91
USP48-215ENST00000534705 STBD1O95210 358 aa3.11□□□□□ -1.91
USP48-215ENST00000534705 TDP2O95551 362 aa3.11□□□□□ -1.91
USP48-215ENST00000534705 EML2O95834 649 aa3.11□□□□□ -1.91
USP48-215ENST00000534705 TBX6O95947 436 aaPredicted RBP3.11□□□□□ -1.91
USP48-215ENST00000534705 CXCL10P02778 98 aa3.11□□□□□ -1.91
USP48-215ENST00000534705 GSTA1P08263 222 aa3.11□□□□□ -1.91
USP48-215ENST00000534705 IQCF3P0C7M6 154 aa3.11□□□□□ -1.91
USP48-215ENST00000534705 CCDC166P0CW27 439 aa3.11□□□□□ -1.91
USP48-215ENST00000534705 SMIM10L2AP0DMW4 78 aa3.11□□□□□ -1.91
USP48-215ENST00000534705 SMIM10L2BP0DMW5 78 aa3.11□□□□□ -1.91
USP48-215ENST00000534705 RPS2P15880 293 aaKnown RBP3.11□□□□□ -1.91
USP48-215ENST00000534705 ERCC2P18074 760 aa3.11□□□□□ -1.91
USP48-215ENST00000534705 CYP11B2P19099 503 aa3.11□□□□□ -1.91
USP48-215ENST00000534705 ALDH4A1P30038 563 aa3.11□□□□□ -1.91
USP48-215ENST00000534705 SUOXP51687 545 aa3.11□□□□□ -1.91
USP48-215ENST00000534705 CCL23P55773 120 aa3.11□□□□□ -1.91
USP48-215ENST00000534705 POLR2FP61218 127 aaKnown RBP3.11□□□□□ -1.91
USP48-215ENST00000534705 VSNL1P62760 191 aa3.11□□□□□ -1.91
USP48-215ENST00000534705 PPP2R2BQ00005 443 aa3.11□□□□□ -1.91
USP48-215ENST00000534705 MGAT3Q09327 533 aa3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms