RNA–Protein interactions for RNA: ENST00000534647.1

CTNND1-238, Transcript of catenin delta 1, human

TSL 5

Gene CTNND1, Length 866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTNND1-238	ENST00000534647	LILRB4	Q8NHJ6	448 aa		10.78	□□□□□ -0.68
CTNND1-238	ENST00000534647	GABPB2	Q8TAK5	448 aa	Predicted RBP	10.78	□□□□□ -0.68
CTNND1-238	ENST00000534647	ASB5	Q8WWX0	329 aa		10.78	□□□□□ -0.68
CTNND1-238	ENST00000534647	ATL1	Q8WXF7	558 aa		10.78	□□□□□ -0.68
CTNND1-238	ENST00000534647	SDCCAG3	Q96C92	435 aa		10.78	□□□□□ -0.68
CTNND1-238	ENST00000534647	SMIM10	Q96HG1	83 aa		10.78	□□□□□ -0.68
CTNND1-238	ENST00000534647	HSH2D	Q96JZ2	352 aa		10.78	□□□□□ -0.68
CTNND1-238	ENST00000534647	ATP6V1G3	Q96LB4	118 aa		10.78	□□□□□ -0.68
CTNND1-238	ENST00000534647	PWWP2A	Q96N64	755 aa		10.78	□□□□□ -0.68
CTNND1-238	ENST00000534647	OR4K3	Q96R72	315 aa		10.78	□□□□□ -0.68
CTNND1-238	ENST00000534647	CACNA1C	Q13936	2221 aa		10.77	□□□□□ -0.68
CTNND1-238	ENST00000534647	SMIM23	A6NLE4	172 aa		10.77	□□□□□ -0.69
CTNND1-238	ENST00000534647	FOXO6	A8MYZ6	492 aa		10.77	□□□□□ -0.69
CTNND1-238	ENST00000534647	RGS16	O15492	202 aa	Predicted RBP	10.77	□□□□□ -0.69
CTNND1-238	ENST00000534647	B4GALT2	O60909	372 aa		10.77	□□□□□ -0.69
CTNND1-238	ENST00000534647	ABHD2	P08910	425 aa		10.77	□□□□□ -0.69
CTNND1-238	ENST00000534647	ENO2	P09104	434 aa	Predicted RBP	10.77	□□□□□ -0.69
CTNND1-238	ENST00000534647	RNH1	P13489	461 aa	Known RBP	10.77	□□□□□ -0.69
CTNND1-238	ENST00000534647	GABRB3	P28472	473 aa		10.77	□□□□□ -0.69
CTNND1-238	ENST00000534647	PTGER1	P34995	402 aa		10.77	□□□□□ -0.69
CTNND1-238	ENST00000534647	IL2	P60568	153 aa		10.77	□□□□□ -0.69
CTNND1-238	ENST00000534647	BTG2	P78543	158 aa		10.77	□□□□□ -0.69
CTNND1-238	ENST00000534647	RGS1	Q08116	209 aa		10.77	□□□□□ -0.69
CTNND1-238	ENST00000534647	GTF3C1	Q12789	2109 aa		10.77	□□□□□ -0.69
CTNND1-238	ENST00000534647	LSR	Q86X29	649 aa	Predicted RBP	10.77	□□□□□ -0.69
CTNND1-238	ENST00000534647	SULF2	Q8IWU5	870 aa		10.77	□□□□□ -0.69
CTNND1-238	ENST00000534647	CNTN4	Q8IWV2	1026 aa		10.77	□□□□□ -0.69
CTNND1-238	ENST00000534647	TRIM42	Q8IWZ5	723 aa		10.77	□□□□□ -0.69
CTNND1-238	ENST00000534647	GPATCH11	Q8N954	259 aa		10.77	□□□□□ -0.69
CTNND1-238	ENST00000534647	APCDD1L	Q8NCL9	501 aa		10.77	□□□□□ -0.69
CTNND1-238	ENST00000534647	TRPV3	Q8NET8	790 aa		10.77	□□□□□ -0.69
CTNND1-238	ENST00000534647	FBXO27	Q8NI29	283 aa		10.77	□□□□□ -0.69
CTNND1-238	ENST00000534647	UTP15	Q8TED0	518 aa	Known RBP	10.77	□□□□□ -0.69
CTNND1-238	ENST00000534647	ARL8A	Q96BM9	186 aa		10.77	□□□□□ -0.69
CTNND1-238	ENST00000534647	FBXL8	Q96CD0	374 aa		10.77	□□□□□ -0.69
CTNND1-238	ENST00000534647	PDLIM5	Q96HC4	596 aa	Known RBP	10.77	□□□□□ -0.69
CTNND1-238	ENST00000534647	TMEM109	Q9BVC6	243 aa		10.77	□□□□□ -0.69
CTNND1-238	ENST00000534647	TRIM54	Q9BYV2	358 aa		10.77	□□□□□ -0.69
CTNND1-238	ENST00000534647	DEFB126	Q9BYW3	111 aa		10.77	□□□□□ -0.69
CTNND1-238	ENST00000534647	EPB41L4B	Q9H329	900 aa		10.77	□□□□□ -0.69
CTNND1-238	ENST00000534647	TNFRSF10D	Q9UBN6	386 aa		10.77	□□□□□ -0.69
CTNND1-238	ENST00000534647	MAD1L1	Q9Y6D9	718 aa		10.77	□□□□□ -0.69
CTNND1-238	ENST00000534647		A0A1B0GTH9	108 aa		10.76	□□□□□ -0.69
CTNND1-238	ENST00000534647		E7ESA3	106 aa		10.76	□□□□□ -0.69
CTNND1-238	ENST00000534647	ZNHIT1	O43257	154 aa		10.76	□□□□□ -0.69
CTNND1-238	ENST00000534647	PEX1	O43933	1283 aa		10.76	□□□□□ -0.69
CTNND1-238	ENST00000534647	AHSG	P02765	367 aa		10.76	□□□□□ -0.69
CTNND1-238	ENST00000534647	SHBG	P04278	402 aa		10.76	□□□□□ -0.69
CTNND1-238	ENST00000534647	SERPINA6	P08185	405 aa		10.76	□□□□□ -0.69
CTNND1-238	ENST00000534647	ZNF888	P0CJ79	500 aa	Predicted RBP	10.76	□□□□□ -0.69
CTNND1-238	ENST00000534647	IMPDH2	P12268	514 aa		10.76	□□□□□ -0.69
CTNND1-238	ENST00000534647	CD1E	P15812	388 aa		10.76	□□□□□ -0.69
CTNND1-238	ENST00000534647	PGAM1	P18669	254 aa		10.76	□□□□□ -0.69
CTNND1-238	ENST00000534647	TFEB	P19484	476 aa		10.76	□□□□□ -0.69
CTNND1-238	ENST00000534647	CHRNB4	P30926	498 aa		10.76	□□□□□ -0.69
CTNND1-238	ENST00000534647	MEOX1	P50221	254 aa		10.76	□□□□□ -0.69
CTNND1-238	ENST00000534647	CLCN2	P51788	898 aa		10.76	□□□□□ -0.69
CTNND1-238	ENST00000534647	GPR143	P51810	404 aa		10.76	□□□□□ -0.69
CTNND1-238	ENST00000534647	CDKN2D	P55273	166 aa		10.76	□□□□□ -0.69
CTNND1-238	ENST00000534647	RPS26	P62854	115 aa	Known RBP	10.76	□□□□□ -0.69
CTNND1-238	ENST00000534647	TFF3	Q07654	80 aa		10.76	□□□□□ -0.69
CTNND1-238	ENST00000534647	HYAL2	Q12891	473 aa		10.76	□□□□□ -0.69
CTNND1-238	ENST00000534647	CSHL1	Q14406	222 aa		10.76	□□□□□ -0.69
CTNND1-238	ENST00000534647	TTMP	Q5BVD1	217 aa		10.76	□□□□□ -0.69
CTNND1-238	ENST00000534647	CMPK2	Q5EBM0	449 aa		10.76	□□□□□ -0.69
CTNND1-238	ENST00000534647	CATSPERE	Q5SY80	951 aa		10.76	□□□□□ -0.69
CTNND1-238	ENST00000534647	ARHGAP11A	Q6P4F7	1023 aa		10.76	□□□□□ -0.69
CTNND1-238	ENST00000534647	C3P1	Q6ZMU1	363 aa		10.76	□□□□□ -0.69
CTNND1-238	ENST00000534647	CYP4X1	Q8N118	509 aa		10.76	□□□□□ -0.69
CTNND1-238	ENST00000534647	MARVELD2	Q8N4S9	558 aa		10.76	□□□□□ -0.69
CTNND1-238	ENST00000534647	ARFGAP2	Q8N6H7	521 aa		10.76	□□□□□ -0.69
CTNND1-238	ENST00000534647	ANKRD53	Q8N9V6	530 aa		10.76	□□□□□ -0.69
CTNND1-238	ENST00000534647	FBXO36	Q8NEA4	188 aa		10.76	□□□□□ -0.69
CTNND1-238	ENST00000534647	B3GNT7	Q8NFL0	401 aa		10.76	□□□□□ -0.69
CTNND1-238	ENST00000534647	NEIL2	Q969S2	332 aa		10.76	□□□□□ -0.69
CTNND1-238	ENST00000534647	PYCR2	Q96C36	320 aa		10.76	□□□□□ -0.69
CTNND1-238	ENST00000534647	LRRC39	Q96DD0	335 aa		10.76	□□□□□ -0.69
CTNND1-238	ENST00000534647	LINGO1	Q96FE5	620 aa		10.76	□□□□□ -0.69
CTNND1-238	ENST00000534647	SCYL1	Q96KG9	808 aa		10.76	□□□□□ -0.69
CTNND1-238	ENST00000534647	NDN	Q99608	321 aa		10.76	□□□□□ -0.69
CTNND1-238	ENST00000534647	TP63	Q9H3D4	680 aa	Predicted RBP	10.76	□□□□□ -0.69
CTNND1-238	ENST00000534647	PPCS	Q9HAB8	311 aa		10.76	□□□□□ -0.69
CTNND1-238	ENST00000534647	PELI2	Q9HAT8	420 aa		10.76	□□□□□ -0.69
CTNND1-238	ENST00000534647	IARS2	Q9NSE4	1012 aa	Known RBP	10.76	□□□□□ -0.69
CTNND1-238	ENST00000534647	ARL15	Q9NXU5	204 aa		10.76	□□□□□ -0.69
CTNND1-238	ENST00000534647	ZFAT	Q9P243	1243 aa		10.76	□□□□□ -0.69
CTNND1-238	ENST00000534647	MMACHC	Q9Y4U1	282 aa		10.76	□□□□□ -0.69
CTNND1-238	ENST00000534647	SCN3A	Q9NY46	2000 aa		10.75	□□□□□ -0.69
CTNND1-238	ENST00000534647	SYNDIG1L	A6NDD5	238 aa		10.75	□□□□□ -0.69
CTNND1-238	ENST00000534647	TFEC	O14948	347 aa	Predicted RBP	10.75	□□□□□ -0.69
CTNND1-238	ENST00000534647	KRT38	O76015	456 aa		10.75	□□□□□ -0.69
CTNND1-238	ENST00000534647	TOX	O94900	526 aa		10.75	□□□□□ -0.69
CTNND1-238	ENST00000534647	TPO	P07202	933 aa		10.75	□□□□□ -0.69
CTNND1-238	ENST00000534647	GSTA2	P09210	222 aa		10.75	□□□□□ -0.69
CTNND1-238	ENST00000534647	MAOA	P21397	527 aa		10.75	□□□□□ -0.69
CTNND1-238	ENST00000534647	HSD17B7	P56937	341 aa		10.75	□□□□□ -0.69
CTNND1-238	ENST00000534647	OLR1	P78380	273 aa		10.75	□□□□□ -0.69
CTNND1-238	ENST00000534647	REEP5	Q00765	189 aa		10.75	□□□□□ -0.69
CTNND1-238	ENST00000534647	GABPB1	Q06547	395 aa	Predicted RBP	10.75	□□□□□ -0.69
CTNND1-238	ENST00000534647	MPP2	Q14168	576 aa		10.75	□□□□□ -0.69

Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms