RNA–Protein interactions for RNA: ENST00000534551.2

VPS11-205, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 3

Gene VPS11, Length 585 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-205ENST00000534551 TP53TG5Q9Y2B4 290 aa13.17□□□□□ -0.3
VPS11-205ENST00000534551 ATG4BQ9Y4P1 393 aa13.17□□□□□ -0.3
VPS11-205ENST00000534551 NSG1A0A0A6YYJ2 146 aa13.16□□□□□ -0.3
VPS11-205ENST00000534551 A0A1W2PS29 197 aa13.16□□□□□ -0.3
VPS11-205ENST00000534551 GLOD5A6NK44 160 aa13.16□□□□□ -0.3
VPS11-205ENST00000534551 PRMT3O60678 531 aa13.16□□□□□ -0.3
VPS11-205ENST00000534551 HPP00738 406 aa13.16□□□□□ -0.3
VPS11-205ENST00000534551 CPN2P22792 545 aa13.16□□□□□ -0.3
VPS11-205ENST00000534551 RAE1P78406 368 aaKnown RBP13.16□□□□□ -0.3
VPS11-205ENST00000534551 BTKQ06187 659 aa13.16□□□□□ -0.3
VPS11-205ENST00000534551 CSTF3Q12996 717 aaKnown RBP13.16□□□□□ -0.3
VPS11-205ENST00000534551 SLC13A2Q13183 592 aa13.16□□□□□ -0.3
VPS11-205ENST00000534551 NSDHLQ15738 373 aa13.16□□□□□ -0.3
VPS11-205ENST00000534551 SFT2D3Q587I9 215 aa13.16□□□□□ -0.3
VPS11-205ENST00000534551 SH2D4BQ5SQS7 431 aa13.16□□□□□ -0.3
VPS11-205ENST00000534551 AGBL2Q5U5Z8 902 aa13.16□□□□□ -0.3
VPS11-205ENST00000534551 KANK2Q63ZY3 851 aa13.16□□□□□ -0.3
VPS11-205ENST00000534551 MRM1Q6IN84 353 aaKnown RBP13.16□□□□□ -0.3
VPS11-205ENST00000534551 CYP20A1Q6UW02 462 aa13.16□□□□□ -0.3
VPS11-205ENST00000534551 HDXQ7Z353 690 aa13.16□□□□□ -0.3
VPS11-205ENST00000534551 CPEB2Q7Z5Q1 589 aaKnown RBP13.16□□□□□ -0.3
VPS11-205ENST00000534551 NUDCD3Q8IVD9 361 aa13.16□□□□□ -0.3
VPS11-205ENST00000534551 OR4N5Q8IXE1 308 aa13.16□□□□□ -0.3
VPS11-205ENST00000534551 METTL4Q8N3J2 472 aa13.16□□□□□ -0.3
VPS11-205ENST00000534551 ZCCHC7Q8N3Z6 543 aaKnown RBP13.16□□□□□ -0.3
VPS11-205ENST00000534551 TMEM102Q8N9M5 508 aaPredicted RBP13.16□□□□□ -0.3
VPS11-205ENST00000534551 SRFBP1Q8NEF9 429 aaKnown RBP13.16□□□□□ -0.3
VPS11-205ENST00000534551 OR2T11Q8NH01 316 aa13.16□□□□□ -0.3
VPS11-205ENST00000534551 DOK4Q8TEW6 326 aa13.16□□□□□ -0.3
VPS11-205ENST00000534551 METTL21AQ8WXB1 218 aa13.16□□□□□ -0.3
VPS11-205ENST00000534551 ABHD17AQ96GS6 310 aa13.16□□□□□ -0.3
VPS11-205ENST00000534551 CNDP1Q96KN2 507 aa13.16□□□□□ -0.3
VPS11-205ENST00000534551 SH3GL2Q99962 352 aa13.16□□□□□ -0.3
VPS11-205ENST00000534551 STMN4Q9H169 189 aaPredicted RBP13.16□□□□□ -0.3
VPS11-205ENST00000534551 TUBB1Q9H4B7 451 aa13.16□□□□□ -0.3
VPS11-205ENST00000534551 DDX31Q9H8H2 851 aaKnown RBP13.16□□□□□ -0.3
VPS11-205ENST00000534551 BRF2Q9HAW0 419 aa13.16□□□□□ -0.3
VPS11-205ENST00000534551 LYRM4Q9HD34 91 aa13.16□□□□□ -0.3
VPS11-205ENST00000534551 PRDM9Q9NQV7 894 aa13.16□□□□□ -0.3
VPS11-205ENST00000534551 GPR83Q9NYM4 423 aa13.16□□□□□ -0.3
VPS11-205ENST00000534551 ASB4Q9Y574 426 aa13.16□□□□□ -0.3
VPS11-205ENST00000534551 A0A1W2PQ72 361 aa13.15□□□□□ -0.3
VPS11-205ENST00000534551 A0A1W2PR48 441 aa13.15□□□□□ -0.3
VPS11-205ENST00000534551 AZIN1O14977 448 aa13.15□□□□□ -0.3
VPS11-205ENST00000534551 FGF17O60258 216 aa13.15□□□□□ -0.3
VPS11-205ENST00000534551 ULK1O75385 1050 aa13.15□□□□□ -0.3
VPS11-205ENST00000534551 C1QL1O75973 258 aa13.15□□□□□ -0.3
VPS11-205ENST00000534551 FAM58BPP0C7Q3 252 aa13.15□□□□□ -0.3
VPS11-205ENST00000534551 NR2F6P10588 404 aa13.15□□□□□ -0.3
VPS11-205ENST00000534551 IL10P22301 178 aa13.15□□□□□ -0.3
VPS11-205ENST00000534551 ITGA3P26006 1051 aa13.15□□□□□ -0.3
VPS11-205ENST00000534551 ST13P50502 369 aaKnown RBP13.15□□□□□ -0.3
VPS11-205ENST00000534551 RRADP55042 308 aa13.15□□□□□ -0.3
VPS11-205ENST00000534551 OR4D2P58180 307 aa13.15□□□□□ -0.3
VPS11-205ENST00000534551 ASPHQ12797 758 aa13.15□□□□□ -0.3
VPS11-205ENST00000534551 PAPD4Q6PIY7 484 aaKnown RBP13.15□□□□□ -0.3
VPS11-205ENST00000534551 MED25Q71SY5 747 aa13.15□□□□□ -0.3
VPS11-205ENST00000534551 PLPP5Q8NEB5 264 aa13.15□□□□□ -0.3
VPS11-205ENST00000534551 SREK1Q8WXA9 508 aaKnown RBP13.15□□□□□ -0.3
VPS11-205ENST00000534551 SLC39A7Q92504 469 aa13.15□□□□□ -0.3
VPS11-205ENST00000534551 FER1L6-AS2Q96M78 137 aa13.15□□□□□ -0.3
VPS11-205ENST00000534551 ROGDIQ9GZN7 287 aa13.15□□□□□ -0.3
VPS11-205ENST00000534551 ZNF700Q9H0M5 742 aa13.15□□□□□ -0.3
VPS11-205ENST00000534551 ZBTB20Q9HC78 741 aaPredicted RBP13.15□□□□□ -0.3
VPS11-205ENST00000534551 C5AR2Q9P296 337 aa13.15□□□□□ -0.3
VPS11-205ENST00000534551 GIMAP2Q9UG22 337 aa13.15□□□□□ -0.3
VPS11-205ENST00000534551 ZDHHC2Q9UIJ5 367 aa13.15□□□□□ -0.3
VPS11-205ENST00000534551 TLN1Q9Y490 2541 aaKnown RBP13.15□□□□□ -0.3
VPS11-205ENST00000534551 COL6A6A6NMZ7 2263 aa13.14□□□□□ -0.31
VPS11-205ENST00000534551 TCRBV16S1A1N1A0A5B0 115 aa13.14□□□□□ -0.31
VPS11-205ENST00000534551 SKAP2O75563 359 aaPredicted RBP13.14□□□□□ -0.31
VPS11-205ENST00000534551 CEACAM4O75871 244 aa13.14□□□□□ -0.31
VPS11-205ENST00000534551 SERPINE1P05121 402 aa13.14□□□□□ -0.31
VPS11-205ENST00000534551 JUNP05412 331 aaKnown RBP13.14□□□□□ -0.31
VPS11-205ENST00000534551 UROSP10746 265 aa13.14□□□□□ -0.31
VPS11-205ENST00000534551 ITGAMP11215 1152 aa13.14□□□□□ -0.31
VPS11-205ENST00000534551 HSD3B1P14060 373 aa13.14□□□□□ -0.31
VPS11-205ENST00000534551 HSD3B2P26439 372 aa13.14□□□□□ -0.31
VPS11-205ENST00000534551 AIMP2Q13155 320 aaKnown RBP13.14□□□□□ -0.31
VPS11-205ENST00000534551 C10orf62Q5T681 223 aaPredicted RBP13.14□□□□□ -0.31
VPS11-205ENST00000534551 HHATQ5VTY9 493 aa13.14□□□□□ -0.31
VPS11-205ENST00000534551 B3GNTL1Q67FW5 361 aaPredicted RBP13.14□□□□□ -0.31
VPS11-205ENST00000534551 NDUFAF7Q7L592 441 aa13.14□□□□□ -0.31
VPS11-205ENST00000534551 GPR180Q86V85 440 aa13.14□□□□□ -0.31
VPS11-205ENST00000534551 GALNT16Q8N428 558 aa13.14□□□□□ -0.31
VPS11-205ENST00000534551 KIF2BQ8N4N8 673 aa13.14□□□□□ -0.31
VPS11-205ENST00000534551 SIRT6Q8N6T7 355 aa13.14□□□□□ -0.31
VPS11-205ENST00000534551 ZNF781Q8N8C0 355 aa13.14□□□□□ -0.31
VPS11-205ENST00000534551 CLEC1AQ8NC01 280 aa13.14□□□□□ -0.31
VPS11-205ENST00000534551 PPP1R14CQ8TAE6 165 aa13.14□□□□□ -0.31
VPS11-205ENST00000534551 C9orf43Q8TAL5 461 aaPredicted RBP13.14□□□□□ -0.31
VPS11-205ENST00000534551 BRIX1Q8TDN6 353 aaKnown RBP13.14□□□□□ -0.31
VPS11-205ENST00000534551 ADAMTS18Q8TE60 1221 aa13.14□□□□□ -0.31
VPS11-205ENST00000534551 TWIST2Q8WVJ9 160 aa13.14□□□□□ -0.31
VPS11-205ENST00000534551 ANKRD9Q96BM1 317 aaPredicted RBP13.14□□□□□ -0.31
VPS11-205ENST00000534551 THOC3Q96J01 351 aaKnown RBP13.14□□□□□ -0.31
VPS11-205ENST00000534551 ATP6V1G3Q96LB4 118 aa13.14□□□□□ -0.31
VPS11-205ENST00000534551 IP6K3Q96PC2 410 aa13.14□□□□□ -0.31
VPS11-205ENST00000534551 TRMOQ9BU70 441 aa13.14□□□□□ -0.31
VPS11-205ENST00000534551 SLC25A23Q9BV35 468 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms