RNA–Protein interactions for RNA: ENST00000534149.5

CTSB-230, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-230ENST00000534149 RELL2Q8NC24 303 aaPredicted RBP13.81□□□□□ -0.2
CTSB-230ENST00000534149 MBD6Q96DN6 1003 aa13.81□□□□□ -0.2
CTSB-230ENST00000534149 MS4A6EQ96DS6 147 aa13.81□□□□□ -0.2
CTSB-230ENST00000534149 SMR3AQ99954 134 aa13.81□□□□□ -0.2
CTSB-230ENST00000534149 NPLQ9BXD5 320 aaPredicted RBP13.81□□□□□ -0.2
CTSB-230ENST00000534149 OR8D2Q9GZM6 311 aa13.81□□□□□ -0.2
CTSB-230ENST00000534149 TRMT1Q9NXH9 659 aaKnown RBP13.81□□□□□ -0.2
CTSB-230ENST00000534149 B4GALT7Q9UBV7 327 aa13.81□□□□□ -0.2
CTSB-230ENST00000534149 CBLCQ9ULV8 474 aa13.81□□□□□ -0.2
CTSB-230ENST00000534149 EDARQ9UNE0 448 aa13.81□□□□□ -0.2
CTSB-230ENST00000534149 MRPS33Q9Y291 106 aaKnown RBP13.81□□□□□ -0.2
CTSB-230ENST00000534149 ATG4BQ9Y4P1 393 aa13.81□□□□□ -0.2
CTSB-230ENST00000534149 FAM47E-STBD1D6RA91 191 aa13.8□□□□□ -0.2
CTSB-230ENST00000534149 B3GALT2O43825 422 aa13.8□□□□□ -0.2
CTSB-230ENST00000534149 FREM3P0C091 2139 aa13.8□□□□□ -0.2
CTSB-230ENST00000534149 PGAM1P18669 254 aa13.8□□□□□ -0.2
CTSB-230ENST00000534149 PLA2G16P53816 162 aa13.8□□□□□ -0.2
CTSB-230ENST00000534149 PPP1R3AQ16821 1122 aa13.8□□□□□ -0.2
CTSB-230ENST00000534149 HYAL4Q2M3T9 481 aa13.8□□□□□ -0.2
CTSB-230ENST00000534149 BBS9Q3SYG4 887 aa13.8□□□□□ -0.2
CTSB-230ENST00000534149 ZNF595Q8IYB9 648 aa13.8□□□□□ -0.2
CTSB-230ENST00000534149 NAT8LQ8N9F0 302 aa13.8□□□□□ -0.2
CTSB-230ENST00000534149 SPC24Q8NBT2 197 aa13.8□□□□□ -0.2
CTSB-230ENST00000534149 MORN4Q8NDC4 146 aa13.8□□□□□ -0.2
CTSB-230ENST00000534149 WFDC11Q8NEX6 87 aa13.8□□□□□ -0.2
CTSB-230ENST00000534149 PTPMT1Q8WUK0 201 aaPredicted RBP13.8□□□□□ -0.2
CTSB-230ENST00000534149 DAZLQ92904 295 aaKnown RBP13.8□□□□□ -0.2
CTSB-230ENST00000534149 SGCZQ96LD1 299 aa13.8□□□□□ -0.2
CTSB-230ENST00000534149 QRFPRQ96P65 431 aa13.8□□□□□ -0.2
CTSB-230ENST00000534149 RBSNQ9H1K0 784 aa13.8□□□□□ -0.2
CTSB-230ENST00000534149 KCNE2Q9Y6J6 123 aa13.8□□□□□ -0.2
CTSB-230ENST00000534149 FBN3Q75N90 2809 aa13.79□□□□□ -0.2
CTSB-230ENST00000534149 LRIT2A6NDA9 550 aa13.79□□□□□ -0.2
CTSB-230ENST00000534149 SYT5O00445 386 aa13.79□□□□□ -0.2
CTSB-230ENST00000534149 CYR61O00622 381 aa13.79□□□□□ -0.2
CTSB-230ENST00000534149 HCN1O60741 890 aa13.79□□□□□ -0.2
CTSB-230ENST00000534149 BANF1O75531 89 aa13.79□□□□□ -0.2
CTSB-230ENST00000534149 GABRA1P14867 456 aa13.79□□□□□ -0.2
CTSB-230ENST00000534149 BMP5P22003 454 aa13.79□□□□□ -0.2
CTSB-230ENST00000534149 CERS1P27544 350 aa13.79□□□□□ -0.2
CTSB-230ENST00000534149 PIGAP37287 484 aa13.79□□□□□ -0.2
CTSB-230ENST00000534149 PEX19P40855 299 aa13.79□□□□□ -0.2
CTSB-230ENST00000534149 LIM2P55344 173 aa13.79□□□□□ -0.2
CTSB-230ENST00000534149 RNF4P78317 190 aa13.79□□□□□ -0.2
CTSB-230ENST00000534149 SLBPQ14493 270 aaKnown RBP eCLIP13.79□□□□□ -0.2
CTSB-230ENST00000534149 OPN5Q6U736 354 aa13.79□□□□□ -0.2
CTSB-230ENST00000534149 SEM1Q6ZVN7 128 aa13.79□□□□□ -0.2
CTSB-230ENST00000534149 CAMKMTQ7Z624 323 aa13.79□□□□□ -0.2
CTSB-230ENST00000534149 BIVMQ86UB2 503 aa13.79□□□□□ -0.2
CTSB-230ENST00000534149 CNTN4Q8IWV2 1026 aa13.79□□□□□ -0.2
CTSB-230ENST00000534149 OR14A16Q8NHC5 309 aa13.79□□□□□ -0.2
CTSB-230ENST00000534149 GABPB2Q8TAK5 448 aaPredicted RBP13.79□□□□□ -0.2
CTSB-230ENST00000534149 SLC2A12Q8TD20 617 aa13.79□□□□□ -0.2
CTSB-230ENST00000534149 FAM222BQ8WU58 562 aa13.79□□□□□ -0.2
CTSB-230ENST00000534149 MAGOHBQ96A72 148 aaKnown RBP13.79□□□□□ -0.2
CTSB-230ENST00000534149 SH3GL2Q99962 352 aa13.79□□□□□ -0.2
CTSB-230ENST00000534149 ALOXE3Q9BYJ1 711 aa13.79□□□□□ -0.2
CTSB-230ENST00000534149 LZTFL1Q9NQ48 299 aa13.79□□□□□ -0.2
CTSB-230ENST00000534149 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.79□□□□□ -0.2
CTSB-230ENST00000534149 NINQ8N4C6 2090 aa13.78□□□□□ -0.2
CTSB-230ENST00000534149 FN1P02751 2386 aaKnown RBP13.78□□□□□ -0.2
CTSB-230ENST00000534149 JMJD1CQ15652 2540 aa13.78□□□□□ -0.2
CTSB-230ENST00000534149 A0A088AWK7 358 aa13.78□□□□□ -0.2
CTSB-230ENST00000534149 NPEPPSL1A6NEC2 478 aa13.78□□□□□ -0.2
CTSB-230ENST00000534149 HSPB2A8KAH6 182 aa13.78□□□□□ -0.2
CTSB-230ENST00000534149 C17orf105B2RV13 164 aa13.78□□□□□ -0.2
CTSB-230ENST00000534149 CDC7O00311 574 aa13.78□□□□□ -0.2
CTSB-230ENST00000534149 CTNSO60931 367 aa13.78□□□□□ -0.2
CTSB-230ENST00000534149 WDR47O94967 919 aa13.78□□□□□ -0.2
CTSB-230ENST00000534149 RAF1P04049 648 aa13.78□□□□□ -0.2
CTSB-230ENST00000534149 RFPL3SP0C7P2 107 aa13.78□□□□□ -0.2
CTSB-230ENST00000534149 C1GALT1C1LP0DN25 315 aa13.78□□□□□ -0.2
CTSB-230ENST00000534149 TNNI3P19429 210 aa13.78□□□□□ -0.2
CTSB-230ENST00000534149 ZNF10P21506 573 aaPredicted RBP13.78□□□□□ -0.2
CTSB-230ENST00000534149 TACR1P25103 407 aa13.78□□□□□ -0.2
CTSB-230ENST00000534149 ASCL1P50553 236 aa13.78□□□□□ -0.2
CTSB-230ENST00000534149 WNT3P56703 355 aa13.78□□□□□ -0.2
CTSB-230ENST00000534149 STX4Q12846 297 aa13.78□□□□□ -0.2
CTSB-230ENST00000534149 HSPB2Q16082 182 aa13.78□□□□□ -0.2
CTSB-230ENST00000534149 DEFB113Q30KQ7 82 aa13.78□□□□□ -0.2
CTSB-230ENST00000534149 C18orf21Q32NC0 220 aaPredicted RBP13.78□□□□□ -0.2
CTSB-230ENST00000534149 FBXW10Q5XX13 1052 aa13.78□□□□□ -0.2
CTSB-230ENST00000534149 TMIGD1Q6UXZ0 262 aa13.78□□□□□ -0.2
CTSB-230ENST00000534149 ULK2Q8IYT8 1036 aa13.78□□□□□ -0.2
CTSB-230ENST00000534149 NAXEQ8NCW5 288 aa13.78□□□□□ -0.2
CTSB-230ENST00000534149 TTLQ8NG68 377 aa13.78□□□□□ -0.2
CTSB-230ENST00000534149 OR8K3Q8NH51 312 aa13.78□□□□□ -0.2
CTSB-230ENST00000534149 RNASE6Q93091 150 aaKnown RBP13.78□□□□□ -0.2
CTSB-230ENST00000534149 CAPZA3Q96KX2 299 aa13.78□□□□□ -0.2
CTSB-230ENST00000534149 EGFL8Q99944 293 aa13.78□□□□□ -0.2
CTSB-230ENST00000534149 SLC6A15Q9H2J7 730 aa13.78□□□□□ -0.2
CTSB-230ENST00000534149 ZNF703Q9H7S9 590 aaPredicted RBP13.78□□□□□ -0.2
CTSB-230ENST00000534149 VTI1BQ9UEU0 232 aa13.78□□□□□ -0.2
CTSB-230ENST00000534149 DAPP1Q9UN19 280 aa13.78□□□□□ -0.2
CTSB-230ENST00000534149 VWA7Q9Y334 891 aa13.78□□□□□ -0.2
CTSB-230ENST00000534149 SYNDIG1LA6NDD5 238 aa13.77□□□□□ -0.21
CTSB-230ENST00000534149 KDM4EB2RXH2 506 aaPredicted RBP13.77□□□□□ -0.21
CTSB-230ENST00000534149 DVL2O14641 736 aa13.77□□□□□ -0.21
CTSB-230ENST00000534149 LDB3O75112 727 aa13.77□□□□□ -0.21
CTSB-230ENST00000534149 H2AFYO75367 372 aaKnown RBP13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms