RNA–Protein interactions for RNA: ENST00000533946.5

SSBP3-215, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-215ENST00000533946 NAA30Q147X3 362 aaPredicted RBP8.97□□□□□ -0.97
SSBP3-215ENST00000533946 ZRSR2Q15696 482 aaKnown RBP8.97□□□□□ -0.97
SSBP3-215ENST00000533946 TBCCQ15814 346 aa8.97□□□□□ -0.97
SSBP3-215ENST00000533946 C3AR1Q16581 482 aa8.97□□□□□ -0.97
SSBP3-215ENST00000533946 C4orf17Q53FE4 359 aa8.97□□□□□ -0.97
SSBP3-215ENST00000533946 SGO1Q5FBB7 561 aa8.97□□□□□ -0.97
SSBP3-215ENST00000533946 CDKL4Q5MAI5 379 aa8.97□□□□□ -0.97
SSBP3-215ENST00000533946 DEPDC1Q5TB30 811 aa8.97□□□□□ -0.97
SSBP3-215ENST00000533946 RPUSD3Q6P087 351 aaKnown RBP8.97□□□□□ -0.97
SSBP3-215ENST00000533946 FAM180BQ6P0A1 224 aa8.97□□□□□ -0.97
SSBP3-215ENST00000533946 GTF2H2CQ6P1K8 395 aa8.97□□□□□ -0.97
SSBP3-215ENST00000533946 FAM180AQ6UWF9 173 aa8.97□□□□□ -0.97
SSBP3-215ENST00000533946 LRRC70Q7Z2Q7 622 aa8.97□□□□□ -0.97
SSBP3-215ENST00000533946 MYLK4Q86YV6 388 aaPredicted RBP8.97□□□□□ -0.97
SSBP3-215ENST00000533946 RELL1Q8IUW5 271 aa8.97□□□□□ -0.97
SSBP3-215ENST00000533946 SIAH3Q8IW03 269 aa8.97□□□□□ -0.97
SSBP3-215ENST00000533946 KRT78Q8N1N4 520 aa8.97□□□□□ -0.97
SSBP3-215ENST00000533946 TCAIMQ8N3R3 496 aa8.97□□□□□ -0.97
SSBP3-215ENST00000533946 WDR20Q8TBZ3 569 aa8.97□□□□□ -0.97
SSBP3-215ENST00000533946 ISL2Q96A47 359 aa8.97□□□□□ -0.97
SSBP3-215ENST00000533946 FAR2Q96K12 515 aa8.97□□□□□ -0.97
SSBP3-215ENST00000533946 ZNF354BQ96LW1 612 aa8.97□□□□□ -0.97
SSBP3-215ENST00000533946 FRMD6Q96NE9 622 aa8.97□□□□□ -0.97
SSBP3-215ENST00000533946 SERINC2Q96SA4 455 aa8.97□□□□□ -0.97
SSBP3-215ENST00000533946 FMO2Q99518 471 aa8.97□□□□□ -0.97
SSBP3-215ENST00000533946 ALOXE3Q9BYJ1 711 aa8.97□□□□□ -0.97
SSBP3-215ENST00000533946 FAM129AQ9BZQ8 928 aa8.97□□□□□ -0.97
SSBP3-215ENST00000533946 RNF32Q9H0A6 362 aa8.97□□□□□ -0.97
SSBP3-215ENST00000533946 NOL11Q9H8H0 719 aaKnown RBP8.97□□□□□ -0.97
SSBP3-215ENST00000533946 IPPKQ9H8X2 491 aa8.97□□□□□ -0.97
SSBP3-215ENST00000533946 TMEM216Q9P0N5 145 aa8.97□□□□□ -0.97
SSBP3-215ENST00000533946 C19orf25Q9UFG5 118 aaPredicted RBP8.97□□□□□ -0.97
SSBP3-215ENST00000533946 TINAGQ9UJW2 476 aa8.97□□□□□ -0.97
SSBP3-215ENST00000533946 PCTPQ9UKL6 214 aa8.97□□□□□ -0.97
SSBP3-215ENST00000533946 SLC5A6Q9Y289 635 aa8.97□□□□□ -0.97
SSBP3-215ENST00000533946 FREM3P0C091 2139 aa8.96□□□□□ -0.97
SSBP3-215ENST00000533946 POLQO75417 2590 aa8.96□□□□□ -0.97
SSBP3-215ENST00000533946 A0A1W2PPM1 405 aa8.96□□□□□ -0.98
SSBP3-215ENST00000533946 NPIPA5E9PKD4 350 aa8.96□□□□□ -0.98
SSBP3-215ENST00000533946 PSMD12O00232 456 aaPredicted RBP8.96□□□□□ -0.98
SSBP3-215ENST00000533946 PGRMC2O15173 223 aa8.96□□□□□ -0.98
SSBP3-215ENST00000533946 OR2J2O76002 312 aa8.96□□□□□ -0.98
SSBP3-215ENST00000533946 OR6B1O95007 311 aa8.96□□□□□ -0.98
SSBP3-215ENST00000533946 LRATO95237 230 aa8.96□□□□□ -0.98
SSBP3-215ENST00000533946 RASAL1O95294 804 aa8.96□□□□□ -0.98
SSBP3-215ENST00000533946 CLPSP04118 112 aa8.96□□□□□ -0.98
SSBP3-215ENST00000533946 S100BP04271 92 aaPredicted RBP8.96□□□□□ -0.98
SSBP3-215ENST00000533946 SP1P08047 785 aa8.96□□□□□ -0.98
SSBP3-215ENST00000533946 CTAGE8P0CG41 777 aa8.96□□□□□ -0.98
SSBP3-215ENST00000533946 ICAM2P13598 275 aa8.96□□□□□ -0.98
SSBP3-215ENST00000533946 HIST1H1TP22492 207 aaPredicted RBP8.96□□□□□ -0.98
SSBP3-215ENST00000533946 SOX18P35713 384 aa8.96□□□□□ -0.98
SSBP3-215ENST00000533946 DCTP40126 519 aa8.96□□□□□ -0.98
SSBP3-215ENST00000533946 SERPINB8P50452 374 aa8.96□□□□□ -0.98
SSBP3-215ENST00000533946 ALDH18A1P54886 795 aaKnown RBP8.96□□□□□ -0.98
SSBP3-215ENST00000533946 PCDH1Q08174 1060 aa8.96□□□□□ -0.98
SSBP3-215ENST00000533946 NAB1Q13506 487 aa8.96□□□□□ -0.98
SSBP3-215ENST00000533946 ACAP2Q15057 778 aa8.96□□□□□ -0.98
SSBP3-215ENST00000533946 PCBP2Q15366 365 aaKnown RBP eCLIP8.96□□□□□ -0.984e-9■■■■■ 71.4
SSBP3-215ENST00000533946 EXT1Q16394 746 aa8.96□□□□□ -0.98
SSBP3-215ENST00000533946 MAPKAPK3Q16644 382 aa8.96□□□□□ -0.98
SSBP3-215ENST00000533946 MEP1AQ16819 746 aa8.96□□□□□ -0.98
SSBP3-215ENST00000533946 KHDRBS2Q5VWX1 349 aaKnown RBP8.96□□□□□ -0.98
SSBP3-215ENST00000533946 DESI1Q6ICB0 168 aa8.96□□□□□ -0.98
SSBP3-215ENST00000533946 OR4C11Q6IEV9 310 aa8.96□□□□□ -0.98
SSBP3-215ENST00000533946 GRHL2Q6ISB3 625 aa8.96□□□□□ -0.98
SSBP3-215ENST00000533946 LETMD1Q6P1Q0 360 aa8.96□□□□□ -0.98
SSBP3-215ENST00000533946 MED27Q6P2C8 311 aa8.96□□□□□ -0.98
SSBP3-215ENST00000533946 TRIM40Q6P9F5 258 aa8.96□□□□□ -0.98
SSBP3-215ENST00000533946 GFRALQ6UXV0 394 aa8.96□□□□□ -0.98
SSBP3-215ENST00000533946 TMEM64Q6YI46 380 aa8.96□□□□□ -0.98
SSBP3-215ENST00000533946 CTAGE4Q8IX94 777 aa8.96□□□□□ -0.98
SSBP3-215ENST00000533946 TBC1D19Q8N5T2 526 aa8.96□□□□□ -0.98
SSBP3-215ENST00000533946 BCORP1Q8N888 145 aa8.96□□□□□ -0.98
SSBP3-215ENST00000533946 B3GNT7Q8NFL0 401 aa8.96□□□□□ -0.98
SSBP3-215ENST00000533946 RHEBL1Q8TAI7 183 aa8.96□□□□□ -0.98
SSBP3-215ENST00000533946 MZB1Q8WU39 189 aa8.96□□□□□ -0.98
SSBP3-215ENST00000533946 UTP23Q9BRU9 249 aaKnown RBP8.96□□□□□ -0.98
SSBP3-215ENST00000533946 EFCAB11Q9BUY7 163 aa8.96□□□□□ -0.98
SSBP3-215ENST00000533946 SLC29A3Q9BZD2 475 aa8.96□□□□□ -0.98
SSBP3-215ENST00000533946 CNOT10Q9H9A5 744 aaKnown RBP8.96□□□□□ -0.98
SSBP3-215ENST00000533946 TNFRSF12AQ9NP84 129 aa8.96□□□□□ -0.98
SSBP3-215ENST00000533946 SEMA4BQ9NPR2 832 aaPredicted RBP8.96□□□□□ -0.98
SSBP3-215ENST00000533946 AGPAT4Q9NRZ5 378 aa8.96□□□□□ -0.98
SSBP3-215ENST00000533946 TEX10Q9NXF1 929 aaPredicted RBP8.96□□□□□ -0.98
SSBP3-215ENST00000533946 LRFN1Q9P244 771 aa8.96□□□□□ -0.98
SSBP3-215ENST00000533946 TNFRSF10DQ9UBN6 386 aa8.96□□□□□ -0.98
SSBP3-215ENST00000533946 EMCNQ9ULC0 261 aa8.96□□□□□ -0.98
SSBP3-215ENST00000533946 NPIPA1Q9UND3 350 aa8.96□□□□□ -0.98
SSBP3-215ENST00000533946 ASB4Q9Y574 426 aa8.96□□□□□ -0.98
SSBP3-215ENST00000533946 NINQ8N4C6 2090 aa8.96□□□□□ -0.98
SSBP3-215ENST00000533946 MED12Q93074 2177 aa8.96□□□□□ -0.98
SSBP3-215ENST00000533946 DNAJC13O75165 2243 aa8.96□□□□□ -0.98
SSBP3-215ENST00000533946 NCOA6Q14686 2063 aaPredicted RBP8.95□□□□□ -0.98
SSBP3-215ENST00000533946 A8MT66 165 aa8.95□□□□□ -0.98
SSBP3-215ENST00000533946 C19orf84I3L1E1 186 aa8.95□□□□□ -0.98
SSBP3-215ENST00000533946 RIPK2O43353 540 aa8.95□□□□□ -0.98
SSBP3-215ENST00000533946 CTNSO60931 367 aa8.95□□□□□ -0.98
SSBP3-215ENST00000533946 ITGA10O75578 1167 aa8.95□□□□□ -0.98
SSBP3-215ENST00000533946 SLC25A12O75746 678 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms