RNA–Protein interactions for RNA: ENST00000533595.5

SF3B2-214, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 5

Gene SF3B2, Length 1,081 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-214ENST00000533595 ILKAPQ9H0C8 392 aaPredicted RBP13.72□□□□□ -0.21
SF3B2-214ENST00000533595 MANSC1Q9H8J5 431 aa13.72□□□□□ -0.21
SF3B2-214ENST00000533595 PRDM9Q9NQV7 894 aa13.72□□□□□ -0.21
SF3B2-214ENST00000533595 C19orf25Q9UFG5 118 aaPredicted RBP13.72□□□□□ -0.21
SF3B2-214ENST00000533595 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.72□□□□□ -0.21
SF3B2-214ENST00000533595 RAP2CQ9Y3L5 183 aa13.72□□□□□ -0.21
SF3B2-214ENST00000533595 ATG4BQ9Y4P1 393 aa13.72□□□□□ -0.21
SF3B2-214ENST00000533595 MMACHCQ9Y4U1 282 aa13.72□□□□□ -0.21
SF3B2-214ENST00000533595 CHD6Q8TD26 2715 aa13.72□□□□□ -0.21
SF3B2-214ENST00000533595 BLACEA4D250 179 aa13.71□□□□□ -0.21
SF3B2-214ENST00000533595 RGS14O43566 566 aa13.71□□□□□ -0.21
SF3B2-214ENST00000533595 RSL1D1O76021 490 aaKnown RBP13.71□□□□□ -0.21
SF3B2-214ENST00000533595 LINC00032P0C843 101 aa13.71□□□□□ -0.21
SF3B2-214ENST00000533595 NR1D1P20393 614 aa13.71□□□□□ -0.21
SF3B2-214ENST00000533595 TLX1P31314 330 aaPredicted RBP13.71□□□□□ -0.21
SF3B2-214ENST00000533595 BUD31P41223 144 aaPredicted RBP13.71□□□□□ -0.21
SF3B2-214ENST00000533595 MAPK12P53778 367 aa13.71□□□□□ -0.21
SF3B2-214ENST00000533595 RRADP55042 308 aa13.71□□□□□ -0.21
SF3B2-214ENST00000533595 HNRNPH2P55795 449 aaKnown RBP13.71□□□□□ -0.21
SF3B2-214ENST00000533595 HSD17B7P56937 341 aa13.71□□□□□ -0.21
SF3B2-214ENST00000533595 BTG2P78543 158 aa13.71□□□□□ -0.21
SF3B2-214ENST00000533595 RHDQ02161 417 aa13.71□□□□□ -0.21
SF3B2-214ENST00000533595 BTKQ06187 659 aa13.71□□□□□ -0.21
SF3B2-214ENST00000533595 NSDHLQ15738 373 aa13.71□□□□□ -0.21
SF3B2-214ENST00000533595 TBR1Q16650 682 aa13.71□□□□□ -0.21
SF3B2-214ENST00000533595 BORAQ6PGQ7 559 aa13.71□□□□□ -0.21
SF3B2-214ENST00000533595 TMEM205Q6UW68 189 aa13.71□□□□□ -0.21
SF3B2-214ENST00000533595 DDIASQ8IXT1 998 aa13.71□□□□□ -0.21
SF3B2-214ENST00000533595 ZNF781Q8N8C0 355 aa13.71□□□□□ -0.21
SF3B2-214ENST00000533595 TMEM102Q8N9M5 508 aaPredicted RBP13.71□□□□□ -0.21
SF3B2-214ENST00000533595 TMEM52Q8NDY8 209 aa13.71□□□□□ -0.21
SF3B2-214ENST00000533595 OR11G2Q8NGC1 345 aa13.71□□□□□ -0.21
SF3B2-214ENST00000533595 APOBEC4Q8WW27 367 aaKnown RBP13.71□□□□□ -0.21
SF3B2-214ENST00000533595 C8orf44Q96CB5 159 aa13.71□□□□□ -0.21
SF3B2-214ENST00000533595 APIPQ96GX9 242 aa13.71□□□□□ -0.21
SF3B2-214ENST00000533595 SORT1Q99523 831 aa13.71□□□□□ -0.21
SF3B2-214ENST00000533595 MESP1Q9BRJ9 268 aa13.71□□□□□ -0.21
SF3B2-214ENST00000533595 TUBB1Q9H4B7 451 aa13.71□□□□□ -0.21
SF3B2-214ENST00000533595 PRTFDC1Q9NRG1 225 aa13.71□□□□□ -0.21
SF3B2-214ENST00000533595 THAP1Q9NVV9 213 aa13.71□□□□□ -0.21
SF3B2-214ENST00000533595 FBXL4Q9UKA2 621 aa13.71□□□□□ -0.21
SF3B2-214ENST00000533595 CCL27Q9Y4X3 112 aa13.71□□□□□ -0.21
SF3B2-214ENST00000533595 ASB4Q9Y574 426 aa13.71□□□□□ -0.21
SF3B2-214ENST00000533595 PTGDR2Q9Y5Y4 395 aa13.71□□□□□ -0.21
SF3B2-214ENST00000533595 KCNMB2Q9Y691 235 aa13.71□□□□□ -0.21
SF3B2-214ENST00000533595 LOC102723996A0A087X1L8 192 aa13.7□□□□□ -0.22
SF3B2-214ENST00000533595 ARGFXA6NJG6 315 aa13.7□□□□□ -0.22
SF3B2-214ENST00000533595 KLF11O14901 512 aa13.7□□□□□ -0.22
SF3B2-214ENST00000533595 PIP5K1BO14986 540 aa13.7□□□□□ -0.22
SF3B2-214ENST00000533595 PROM1O43490 865 aa13.7□□□□□ -0.22
SF3B2-214ENST00000533595 SNNO75324 88 aaPredicted RBP13.7□□□□□ -0.22
SF3B2-214ENST00000533595 GUCY1B2O75343 617 aa13.7□□□□□ -0.22
SF3B2-214ENST00000533595 MAOAP21397 527 aa13.7□□□□□ -0.22
SF3B2-214ENST00000533595 RPL14P50914 215 aaKnown RBP13.7□□□□□ -0.22
SF3B2-214ENST00000533595 HNRNPFP52597 415 aaKnown RBP13.7□□□□□ -0.22
SF3B2-214ENST00000533595 TNFRSF17Q02223 184 aa13.7□□□□□ -0.22
SF3B2-214ENST00000533595 EEF1A2Q05639 463 aaKnown RBP13.7□□□□□ -0.22
SF3B2-214ENST00000533595 SLC13A2Q13183 592 aa13.7□□□□□ -0.22
SF3B2-214ENST00000533595 GALNT18Q6P9A2 607 aa13.7□□□□□ -0.22
SF3B2-214ENST00000533595 LANCL3Q6ZV70 420 aa13.7□□□□□ -0.22
SF3B2-214ENST00000533595 ANKRD37Q7Z713 158 aa13.7□□□□□ -0.22
SF3B2-214ENST00000533595 SCUBE1Q8IWY4 988 aa13.7□□□□□ -0.22
SF3B2-214ENST00000533595 DYDC1Q8WWB3 177 aa13.7□□□□□ -0.22
SF3B2-214ENST00000533595 ZNF75CPQ92670 426 aaPredicted RBP13.7□□□□□ -0.22
SF3B2-214ENST00000533595 EXTL1Q92935 676 aa13.7□□□□□ -0.22
SF3B2-214ENST00000533595 TSLPQ969D9 159 aa13.7□□□□□ -0.22
SF3B2-214ENST00000533595 FER1L6-AS2Q96M78 137 aa13.7□□□□□ -0.22
SF3B2-214ENST00000533595 CCT7Q99832 543 aa13.7□□□□□ -0.22
SF3B2-214ENST00000533595 RPF2Q9H7B2 306 aaKnown RBP13.7□□□□□ -0.22
SF3B2-214ENST00000533595 WDR41Q9HAD4 459 aa13.7□□□□□ -0.22
SF3B2-214ENST00000533595 MED4Q9NPJ6 270 aa13.7□□□□□ -0.22
SF3B2-214ENST00000533595 PFDN4Q9NQP4 134 aa13.7□□□□□ -0.22
SF3B2-214ENST00000533595 INTS9Q9NV88 658 aaKnown RBP13.7□□□□□ -0.22
SF3B2-214ENST00000533595 MCM8Q9UJA3 840 aa13.7□□□□□ -0.22
SF3B2-214ENST00000533595 HAO1Q9UJM8 370 aa13.7□□□□□ -0.22
SF3B2-214ENST00000533595 PIEZO2Q9H5I5 2752 aa13.69□□□□□ -0.22
SF3B2-214ENST00000533595 IGKV3D-11A0A0A0MRZ8 115 aa13.69□□□□□ -0.22
SF3B2-214ENST00000533595 GNG14A0A1W2PPG7 69 aa13.69□□□□□ -0.22
SF3B2-214ENST00000533595 A0A1W2PQ72 361 aa13.69□□□□□ -0.22
SF3B2-214ENST00000533595 A0A1W2PR48 441 aa13.69□□□□□ -0.22
SF3B2-214ENST00000533595 NPIPB8E9PQR5 432 aa13.69□□□□□ -0.22
SF3B2-214ENST00000533595 DYNC1I1O14576 645 aa13.69□□□□□ -0.22
SF3B2-214ENST00000533595 PCDH7O60245 1069 aa13.69□□□□□ -0.22
SF3B2-214ENST00000533595 CTNSO60931 367 aa13.69□□□□□ -0.22
SF3B2-214ENST00000533595 SEC22BO75396 215 aa13.69□□□□□ -0.22
SF3B2-214ENST00000533595 SKAP2O75563 359 aaPredicted RBP13.69□□□□□ -0.22
SF3B2-214ENST00000533595 NR2F6P10588 404 aa13.69□□□□□ -0.22
SF3B2-214ENST00000533595 COX6A1P12074 109 aa13.69□□□□□ -0.22
SF3B2-214ENST00000533595 PRPH2P23942 346 aa13.69□□□□□ -0.22
SF3B2-214ENST00000533595 TIA1P31483 386 aaKnown RBP eCLIP13.69□□□□□ -0.223e-8■■■□□ 16
SF3B2-214ENST00000533595 TRA2BP62995 288 aaKnown RBP13.69□□□□□ -0.22
SF3B2-214ENST00000533595 RAE1P78406 368 aaKnown RBP13.69□□□□□ -0.22
SF3B2-214ENST00000533595 NR6A1Q15406 480 aa13.69□□□□□ -0.22
SF3B2-214ENST00000533595 DCAF10Q5QP82 559 aa13.69□□□□□ -0.22
SF3B2-214ENST00000533595 CPZQ66K79 652 aa13.69□□□□□ -0.22
SF3B2-214ENST00000533595 C18orf63Q68DL7 685 aa13.69□□□□□ -0.22
SF3B2-214ENST00000533595 Q6ZSR9 355 aa13.69□□□□□ -0.22
SF3B2-214ENST00000533595 NDUFAF7Q7L592 441 aa13.69□□□□□ -0.22
SF3B2-214ENST00000533595 CPEB2Q7Z5Q1 589 aaKnown RBP13.69□□□□□ -0.22
SF3B2-214ENST00000533595 APLFQ8IW19 511 aaPredicted RBP13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms