RNA–Protein interactions for RNA: ENST00000533246.5

BDNF-218, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,000 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-218ENST00000533246 L3HYPDHQ96EM0 354 aa11.75□□□□□ -0.53
BDNF-218ENST00000533246 ATOH8Q96SQ7 321 aa11.75□□□□□ -0.53
BDNF-218ENST00000533246 C1QTNF1Q9BXJ1 281 aa11.75□□□□□ -0.53
BDNF-218ENST00000533246 SLC6A15Q9H2J7 730 aa11.75□□□□□ -0.53
BDNF-218ENST00000533246 ZNF696Q9H7X3 374 aa11.75□□□□□ -0.53
BDNF-218ENST00000533246 TMEM138Q9NPI0 162 aa11.75□□□□□ -0.53
BDNF-218ENST00000533246 TRPS1Q9UHF7 1281 aa11.75□□□□□ -0.53
BDNF-218ENST00000533246 LOC285095A0A1B0GVY8 99 aa11.75□□□□□ -0.53
BDNF-218ENST00000533246 FAM25EA8MYX2 175 aa11.75□□□□□ -0.53
BDNF-218ENST00000533246 E7EQ34 232 aa11.75□□□□□ -0.53
BDNF-218ENST00000533246 SGCEO43556 437 aa11.75□□□□□ -0.53
BDNF-218ENST00000533246 C8BP07358 591 aa11.75□□□□□ -0.53
BDNF-218ENST00000533246 ATXN1LP0C7T5 689 aaKnown RBP11.75□□□□□ -0.53
BDNF-218ENST00000533246 ATP4BP51164 291 aa11.75□□□□□ -0.53
BDNF-218ENST00000533246 STXBP1P61764 594 aaKnown RBP11.75□□□□□ -0.53
BDNF-218ENST00000533246 GRIN2CQ14957 1233 aa11.75□□□□□ -0.53
BDNF-218ENST00000533246 ATP6AP1Q15904 470 aa11.75□□□□□ -0.53
BDNF-218ENST00000533246 CATSPEREQ5SY80 951 aa11.75□□□□□ -0.53
BDNF-218ENST00000533246 MZT2AQ6P582 158 aa11.75□□□□□ -0.53
BDNF-218ENST00000533246 ZNF773Q6PK81 442 aa11.75□□□□□ -0.53
BDNF-218ENST00000533246 PLEKHG7Q6ZR37 379 aa11.75□□□□□ -0.53
BDNF-218ENST00000533246 OXR1Q8N573 874 aa11.75□□□□□ -0.53
BDNF-218ENST00000533246 NETO1Q8TDF5 533 aa11.75□□□□□ -0.53
BDNF-218ENST00000533246 SNX33Q8WV41 574 aa11.75□□□□□ -0.53
BDNF-218ENST00000533246 FOXJ1Q92949 421 aa11.75□□□□□ -0.53
BDNF-218ENST00000533246 KCNH6Q9H252 994 aa11.75□□□□□ -0.53
BDNF-218ENST00000533246 MBD2Q9UBB5 411 aa11.75□□□□□ -0.53
BDNF-218ENST00000533246 SNX7Q9UNH6 387 aa11.75□□□□□ -0.53
BDNF-218ENST00000533246 IGLON5A6NGN9 336 aa11.75□□□□□ -0.53
BDNF-218ENST00000533246 SSNA1O43805 119 aa11.75□□□□□ -0.53
BDNF-218ENST00000533246 POLR2IP36954 125 aaKnown RBP11.75□□□□□ -0.53
BDNF-218ENST00000533246 SGSHP51688 502 aa11.75□□□□□ -0.53
BDNF-218ENST00000533246 ARF5P84085 180 aa11.75□□□□□ -0.53
BDNF-218ENST00000533246 LGALS3BPQ08380 585 aa11.75□□□□□ -0.53
BDNF-218ENST00000533246 GALEQ14376 348 aa11.75□□□□□ -0.53
BDNF-218ENST00000533246 RBM48Q5RL73 367 aaKnown RBP11.75□□□□□ -0.53
BDNF-218ENST00000533246 FAM91A1Q658Y4 838 aa11.75□□□□□ -0.53
BDNF-218ENST00000533246 ZNF425Q6IV72 752 aa11.75□□□□□ -0.53
BDNF-218ENST00000533246 RNASE11Q8TAA1 199 aaKnown RBP11.75□□□□□ -0.53
BDNF-218ENST00000533246 GEMIN6Q8WXD5 167 aaKnown RBP11.75□□□□□ -0.53
BDNF-218ENST00000533246 FEVQ99581 238 aa11.75□□□□□ -0.53
BDNF-218ENST00000533246 MACROD1Q9BQ69 325 aa11.75□□□□□ -0.53
BDNF-218ENST00000533246 KCNK12Q9HB15 430 aa11.75□□□□□ -0.53
BDNF-218ENST00000533246 ELL3Q9HB65 397 aaPredicted RBP11.75□□□□□ -0.53
BDNF-218ENST00000533246 ARNT2Q9HBZ2 717 aa11.75□□□□□ -0.53
BDNF-218ENST00000533246 AHCTF1Q8WYP5 2266 aa11.74□□□□□ -0.53
BDNF-218ENST00000533246 A0A1B0GW55 424 aa11.74□□□□□ -0.53
BDNF-218ENST00000533246 FAM92AA1XBS5 289 aa11.74□□□□□ -0.53
BDNF-218ENST00000533246 CCDC85CA6NKD9 419 aa11.74□□□□□ -0.53
BDNF-218ENST00000533246 ABCB7O75027 752 aa11.74□□□□□ -0.53
BDNF-218ENST00000533246 ZNF254O75437 659 aa11.74□□□□□ -0.53
BDNF-218ENST00000533246 EEDO75530 441 aaKnown RBP11.74□□□□□ -0.53
BDNF-218ENST00000533246 CDC123O75794 336 aaPredicted RBP11.74□□□□□ -0.53
BDNF-218ENST00000533246 DUX4L2P0CJ85 424 aa11.74□□□□□ -0.53
BDNF-218ENST00000533246 DUX4L3P0CJ86 424 aa11.74□□□□□ -0.53
BDNF-218ENST00000533246 DUX4L4P0CJ87 422 aa11.74□□□□□ -0.53
BDNF-218ENST00000533246 DUX4L5P0CJ88 424 aa11.74□□□□□ -0.53
BDNF-218ENST00000533246 DUX4L6P0CJ89 424 aa11.74□□□□□ -0.53
BDNF-218ENST00000533246 DUX4L7P0CJ90 424 aa11.74□□□□□ -0.53
BDNF-218ENST00000533246 HOXD9P28356 352 aaPredicted RBP11.74□□□□□ -0.53
BDNF-218ENST00000533246 ZNF45Q02386 682 aa11.74□□□□□ -0.53
BDNF-218ENST00000533246 NDUFAF6Q330K2 333 aa11.74□□□□□ -0.53
BDNF-218ENST00000533246 KIAA1614Q5VZ46 1190 aa11.74□□□□□ -0.53
BDNF-218ENST00000533246 KANK2Q63ZY3 851 aa11.74□□□□□ -0.53
BDNF-218ENST00000533246 HSDL2Q6YN16 418 aa11.74□□□□□ -0.53
BDNF-218ENST00000533246 CXXC5Q7LFL8 322 aaKnown RBP11.74□□□□□ -0.53
BDNF-218ENST00000533246 WFIKKN2Q8TEU8 576 aa11.74□□□□□ -0.53
BDNF-218ENST00000533246 RIPOR3Q96MK2 946 aa11.74□□□□□ -0.53
BDNF-218ENST00000533246 PHOX2BQ99453 314 aa11.74□□□□□ -0.53
BDNF-218ENST00000533246 SLC46A2Q9BY10 475 aa11.74□□□□□ -0.53
BDNF-218ENST00000533246 DUX4Q9UBX2 424 aa11.74□□□□□ -0.53
BDNF-218ENST00000533246 B4GALT2O60909 372 aa11.74□□□□□ -0.53
BDNF-218ENST00000533246 M6PRP20645 277 aa11.74□□□□□ -0.53
BDNF-218ENST00000533246 AHCYP23526 432 aa11.74□□□□□ -0.53
BDNF-218ENST00000533246 OPRL1P41146 370 aa11.74□□□□□ -0.53
BDNF-218ENST00000533246 ZNF311Q5JNZ3 666 aa11.74□□□□□ -0.53
BDNF-218ENST00000533246 FAM180AQ6UWF9 173 aa11.74□□□□□ -0.53
BDNF-218ENST00000533246 CCBE1Q6UXH8 406 aaPredicted RBP11.74□□□□□ -0.53
BDNF-218ENST00000533246 CFAP77Q6ZQR2 320 aa11.74□□□□□ -0.53
BDNF-218ENST00000533246 OR4N5Q8IXE1 308 aa11.74□□□□□ -0.53
BDNF-218ENST00000533246 LILRA2Q8N149 483 aa11.74□□□□□ -0.53
BDNF-218ENST00000533246 TSPEARQ8WU66 669 aa11.74□□□□□ -0.53
BDNF-218ENST00000533246 MYRFLQ96LU7 910 aa11.74□□□□□ -0.53
BDNF-218ENST00000533246 KXD1Q9BQD3 176 aa11.74□□□□□ -0.53
BDNF-218ENST00000533246 REV1Q9UBZ9 1251 aa11.74□□□□□ -0.53
BDNF-218ENST00000533246 HCN4Q9Y3Q4 1203 aa11.74□□□□□ -0.53
BDNF-218ENST00000533246 BACE2Q9Y5Z0 518 aa11.74□□□□□ -0.53
BDNF-218ENST00000533246 DDX60LQ5H9U9 1706 aaKnown RBP11.74□□□□□ -0.53
BDNF-218ENST00000533246 A0A0B4J203 849 aa11.74□□□□□ -0.53
BDNF-218ENST00000533246 FABP12A6NFH5 140 aa11.74□□□□□ -0.53
BDNF-218ENST00000533246 HHLA1C9JL84 531 aa11.74□□□□□ -0.53
BDNF-218ENST00000533246 TLR4O00206 839 aa11.74□□□□□ -0.53
BDNF-218ENST00000533246 MT-ND2P03891 347 aa11.74□□□□□ -0.53
BDNF-218ENST00000533246 PRMT2P55345 433 aa11.74□□□□□ -0.53
BDNF-218ENST00000533246 ST3GAL4Q11206 333 aa11.74□□□□□ -0.53
BDNF-218ENST00000533246 C1orf61Q13536 156 aa11.74□□□□□ -0.53
BDNF-218ENST00000533246 DHCR24Q15392 516 aa11.74□□□□□ -0.53
BDNF-218ENST00000533246 NNATQ16517 81 aa11.74□□□□□ -0.53
BDNF-218ENST00000533246 FIP1L1Q6UN15 594 aaKnown RBP11.74□□□□□ -0.53
BDNF-218ENST00000533246 RTN4RL1Q86UN2 441 aaPredicted RBP11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms