RNA–Protein interactions for RNA: ENST00000533244.5

CCS-208, Transcript of copper chaperone for superoxide dismutase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCS, Length 1,430 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-208ENST00000533244 EEDO75530 441 aaKnown RBP19.16■□□□□ 0.66
CCS-208ENST00000533244 ACTN3Q08043 901 aaPredicted RBP19.16■□□□□ 0.66
CCS-208ENST00000533244 SLAMF1Q13291 335 aa19.16■□□□□ 0.66
CCS-208ENST00000533244 TERF2Q15554 542 aa19.16■□□□□ 0.66
CCS-208ENST00000533244 Q6ZS92 163 aa19.16■□□□□ 0.66
CCS-208ENST00000533244 FRMD7Q6ZUT3 714 aa19.16■□□□□ 0.66
CCS-208ENST00000533244 IQCKQ8N0W5 287 aa19.16■□□□□ 0.66
CCS-208ENST00000533244 ZADH2Q8N4Q0 377 aa19.16■□□□□ 0.66
CCS-208ENST00000533244 SIRT6Q8N6T7 355 aa19.16■□□□□ 0.66
CCS-208ENST00000533244 CDYL2Q8N8U2 506 aa19.16■□□□□ 0.66
CCS-208ENST00000533244 NFAM1Q8NET5 270 aaPredicted RBP19.16■□□□□ 0.66
CCS-208ENST00000533244 AGAP11Q8TF27 550 aa19.16■□□□□ 0.66
CCS-208ENST00000533244 EPS8L2Q9H6S3 715 aa19.16■□□□□ 0.66
CCS-208ENST00000533244 BRF2Q9HAW0 419 aa19.16■□□□□ 0.66
CCS-208ENST00000533244 MS4A12Q9NXJ0 267 aa19.16■□□□□ 0.66
CCS-208ENST00000533244 PTGFRNQ9P2B2 879 aa19.16■□□□□ 0.66
CCS-208ENST00000533244 CNTRLQ7Z7A1 2325 aa19.15■□□□□ 0.66
CCS-208ENST00000533244 TMPRSS11DO60235 418 aa19.15■□□□□ 0.66
CCS-208ENST00000533244 ESRRBO95718 433 aa19.15■□□□□ 0.66
CCS-208ENST00000533244 PDYNP01213 254 aa19.15■□□□□ 0.66
CCS-208ENST00000533244 NAGLUP54802 743 aa19.15■□□□□ 0.66
CCS-208ENST00000533244 HNRNPH2P55795 449 aaKnown RBP19.15■□□□□ 0.66
CCS-208ENST00000533244 SLC13A2Q13183 592 aa19.15■□□□□ 0.66
CCS-208ENST00000533244 PCLAFQ15004 111 aa19.15■□□□□ 0.66
CCS-208ENST00000533244 NUDT13Q86X67 352 aa19.15■□□□□ 0.66
CCS-208ENST00000533244 ELP5Q8TE02 316 aa19.15■□□□□ 0.66
CCS-208ENST00000533244 SELENOMQ8WWX9 145 aa19.15■□□□□ 0.66
CCS-208ENST00000533244 MFRPQ9BY79 579 aa19.15■□□□□ 0.66
CCS-208ENST00000533244 PHF11Q9UIL8 331 aa19.15■□□□□ 0.66
CCS-208ENST00000533244 FBXW2Q9UKT8 454 aa19.15■□□□□ 0.66
CCS-208ENST00000533244 PPIEQ9UNP9 301 aaKnown RBP19.15■□□□□ 0.66
CCS-208ENST00000533244 B3GNT3Q9Y2A9 372 aa19.15■□□□□ 0.66
CCS-208ENST00000533244 ASB4Q9Y574 426 aa19.15■□□□□ 0.66
CCS-208ENST00000533244 SPACA6W5XKT8 324 aa19.15■□□□□ 0.66
CCS-208ENST00000533244 MANBAO00462 879 aa19.14■□□□□ 0.65
CCS-208ENST00000533244 UBFD1O14562 309 aaKnown RBP19.14■□□□□ 0.65
CCS-208ENST00000533244 ENO1P06733 434 aaKnown RBP19.14■□□□□ 0.65
CCS-208ENST00000533244 CPN2P22792 545 aa19.14■□□□□ 0.65
CCS-208ENST00000533244 TNFRSF17Q02223 184 aa19.14■□□□□ 0.65
CCS-208ENST00000533244 TLE1Q04724 770 aa19.14■□□□□ 0.65
CCS-208ENST00000533244 KRT71Q3SY84 523 aa19.14■□□□□ 0.65
CCS-208ENST00000533244 TCHHL1Q5QJ38 904 aaPredicted RBP19.14■□□□□ 0.65
CCS-208ENST00000533244 LIPMQ5VYY2 423 aa19.14■□□□□ 0.65
CCS-208ENST00000533244 B3GNTL1Q67FW5 361 aaPredicted RBP19.14■□□□□ 0.65
CCS-208ENST00000533244 LINC00696Q6ZRV3 163 aa19.14■□□□□ 0.65
CCS-208ENST00000533244 GPR180Q86V85 440 aa19.14■□□□□ 0.65
CCS-208ENST00000533244 METTL4Q8N3J2 472 aa19.14■□□□□ 0.65
CCS-208ENST00000533244 CCNYL1Q8N7R7 359 aa19.14■□□□□ 0.65
CCS-208ENST00000533244 LYARQ9NX58 379 aaKnown RBP19.14■□□□□ 0.65
CCS-208ENST00000533244 ADAM29Q9UKF5 820 aa19.14■□□□□ 0.65
CCS-208ENST00000533244 ATG4BQ9Y4P1 393 aa19.14■□□□□ 0.65
CCS-208ENST00000533244 CSAG2Q9Y5P2 127 aa19.14■□□□□ 0.65
CCS-208ENST00000533244 H3BQF6 201 aa19.13■□□□□ 0.65
CCS-208ENST00000533244 KRT6AP02538 564 aa19.13■□□□□ 0.65
CCS-208ENST00000533244 KRT6BP04259 564 aa19.13■□□□□ 0.65
CCS-208ENST00000533244 HSD3B1P14060 373 aa19.13■□□□□ 0.65
CCS-208ENST00000533244 HSD3B2P26439 372 aa19.13■□□□□ 0.65
CCS-208ENST00000533244 PPP2R1BP30154 601 aa19.13■□□□□ 0.65
CCS-208ENST00000533244 KRT6CP48668 564 aa19.13■□□□□ 0.65
CCS-208ENST00000533244 IGLV3-21P80748 117 aaPredicted RBP19.13■□□□□ 0.65
CCS-208ENST00000533244 ZNF33BQ06732 778 aa19.13■□□□□ 0.65
CCS-208ENST00000533244 TBL3Q12788 808 aaKnown RBP19.13■□□□□ 0.65
CCS-208ENST00000533244 PLEKHN1Q494U1 663 aaPredicted RBP19.13■□□□□ 0.65
CCS-208ENST00000533244 SGO1Q5FBB7 561 aa19.13■□□□□ 0.65
CCS-208ENST00000533244 CLNKQ7Z7G1 428 aa19.13■□□□□ 0.65
CCS-208ENST00000533244 EFCAB3Q8N7B9 438 aa19.13■□□□□ 0.65
CCS-208ENST00000533244 CCDC63Q8NA47 563 aa19.13■□□□□ 0.65
CCS-208ENST00000533244 ANKRD9Q96BM1 317 aaPredicted RBP19.13■□□□□ 0.65
CCS-208ENST00000533244 MRPL1Q9BYD6 325 aaKnown RBP19.13■□□□□ 0.65
CCS-208ENST00000533244 IQCGQ9H095 443 aaKnown RBP19.13■□□□□ 0.65
CCS-208ENST00000533244 RNF32Q9H0A6 362 aa19.13■□□□□ 0.65
CCS-208ENST00000533244 ADAP2Q9NPF8 381 aa19.13■□□□□ 0.65
CCS-208ENST00000533244 SENP1Q9P0U3 644 aa19.13■□□□□ 0.65
CCS-208ENST00000533244 J3QKU1 62 aa19.12■□□□□ 0.65
CCS-208ENST00000533244 PROM1O43490 865 aa19.12■□□□□ 0.65
CCS-208ENST00000533244 TYROBPO43914 113 aa19.12■□□□□ 0.65
CCS-208ENST00000533244 FAM58BPP0C7Q3 252 aa19.12■□□□□ 0.65
CCS-208ENST00000533244 CREB1P16220 341 aa19.12■□□□□ 0.65
CCS-208ENST00000533244 TPP2P29144 1249 aaPredicted RBP19.12■□□□□ 0.65
CCS-208ENST00000533244 HTR6P50406 440 aa19.12■□□□□ 0.65
CCS-208ENST00000533244 GALNT1Q10472 559 aaPredicted RBP19.12■□□□□ 0.65
CCS-208ENST00000533244 CSTF3Q12996 717 aaKnown RBP19.12■□□□□ 0.65
CCS-208ENST00000533244 ELAVL1Q15717 326 aaKnown RBP19.12■□□□□ 0.65
CCS-208ENST00000533244 TNFAIP8L3Q5GJ75 292 aa19.12■□□□□ 0.65
CCS-208ENST00000533244 C18orf63Q68DL7 685 aa19.12■□□□□ 0.65
CCS-208ENST00000533244 C10orf107Q8IVU9 208 aa19.12■□□□□ 0.65
CCS-208ENST00000533244 APCDD1LQ8NCL9 501 aa19.12■□□□□ 0.65
CCS-208ENST00000533244 METTL6Q8TCB7 284 aa19.12■□□□□ 0.65
CCS-208ENST00000533244 ZIM3Q96PE6 472 aa19.12■□□□□ 0.65
CCS-208ENST00000533244 FAM111AQ96PZ2 611 aa19.12■□□□□ 0.65
CCS-208ENST00000533244 SMC6Q96SB8 1091 aa19.12■□□□□ 0.65
CCS-208ENST00000533244 HBEGFQ99075 208 aa19.12■□□□□ 0.65
CCS-208ENST00000533244 NPAS2Q99743 824 aa19.12■□□□□ 0.65
CCS-208ENST00000533244 RPF2Q9H7B2 306 aaKnown RBP19.12■□□□□ 0.65
CCS-208ENST00000533244 KCNK13Q9HB14 408 aa19.12■□□□□ 0.65
CCS-208ENST00000533244 MID1IP1Q9NPA3 183 aa19.12■□□□□ 0.65
CCS-208ENST00000533244 AHSPQ9NZD4 102 aa19.12■□□□□ 0.65
CCS-208ENST00000533244 SLC17A7Q9P2U7 560 aa19.12■□□□□ 0.65
CCS-208ENST00000533244 VTI1BQ9UEU0 232 aa19.12■□□□□ 0.65
CCS-208ENST00000533244 SLC12A4Q9UP95 1085 aa19.12■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms