RNA–Protein interactions for RNA: ENST00000533149.1

TRAPPC4-213, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,340 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-213ENST00000533149 CTSFQ9UBX1 484 aa10.66□□□□□ -0.7
TRAPPC4-213ENST00000533149 MARCOQ9UEW3 520 aaPredicted RBP10.66□□□□□ -0.7
TRAPPC4-213ENST00000533149 ST6GALNAC2Q9UJ37 374 aa10.66□□□□□ -0.7
TRAPPC4-213ENST00000533149 HAO1Q9UJM8 370 aa10.66□□□□□ -0.7
TRAPPC4-213ENST00000533149 PPT2Q9UMR5 302 aa10.66□□□□□ -0.7
TRAPPC4-213ENST00000533149 ANGPTL3Q9Y5C1 460 aa10.66□□□□□ -0.7
TRAPPC4-213ENST00000533149 K7EPI3 171 aa10.65□□□□□ -0.7
TRAPPC4-213ENST00000533149 PRRG2O14669 202 aa10.65□□□□□ -0.7
TRAPPC4-213ENST00000533149 WISP2O76076 250 aa10.65□□□□□ -0.7
TRAPPC4-213ENST00000533149 WDR47O94967 919 aa10.65□□□□□ -0.7
TRAPPC4-213ENST00000533149 SLC16A8O95907 504 aa10.65□□□□□ -0.7
TRAPPC4-213ENST00000533149 IMPA1P29218 277 aa10.65□□□□□ -0.7
TRAPPC4-213ENST00000533149 SLC6A12P48065 614 aa10.65□□□□□ -0.7
TRAPPC4-213ENST00000533149 MEOX1P50221 254 aa10.65□□□□□ -0.7
TRAPPC4-213ENST00000533149 ADAM8P78325 824 aa10.65□□□□□ -0.7
TRAPPC4-213ENST00000533149 ALDH6A1Q02252 535 aaKnown RBP10.65□□□□□ -0.7
TRAPPC4-213ENST00000533149 OCA2Q04671 838 aa10.65□□□□□ -0.7
TRAPPC4-213ENST00000533149 LCP2Q13094 533 aa10.65□□□□□ -0.7
TRAPPC4-213ENST00000533149 MYBPHQ13203 477 aa10.65□□□□□ -0.7
TRAPPC4-213ENST00000533149 GRB7Q14451 532 aa10.65□□□□□ -0.7
TRAPPC4-213ENST00000533149 ZNF766Q5HY98 468 aa10.65□□□□□ -0.7
TRAPPC4-213ENST00000533149 GKAP1Q5VSY0 366 aaPredicted RBP10.65□□□□□ -0.7
TRAPPC4-213ENST00000533149 Q71RC1 249 aaPredicted RBP10.65□□□□□ -0.7
TRAPPC4-213ENST00000533149 CXXC5Q7LFL8 322 aaKnown RBP10.65□□□□□ -0.7
TRAPPC4-213ENST00000533149 DOLPP1Q86YN1 238 aa10.65□□□□□ -0.7
TRAPPC4-213ENST00000533149 KLHDC8AQ8IYD2 350 aa10.65□□□□□ -0.7
TRAPPC4-213ENST00000533149 OR56A3Q8NH54 315 aa10.65□□□□□ -0.7
TRAPPC4-213ENST00000533149 OR5K2Q8NHB8 316 aa10.65□□□□□ -0.7
TRAPPC4-213ENST00000533149 PIWIL2Q8TC59 973 aaKnown RBP10.65□□□□□ -0.7
TRAPPC4-213ENST00000533149 ZNF480Q8WV37 535 aa10.65□□□□□ -0.7
TRAPPC4-213ENST00000533149 ASB5Q8WWX0 329 aa10.65□□□□□ -0.7
TRAPPC4-213ENST00000533149 ATP6V1E2Q96A05 226 aa10.65□□□□□ -0.7
TRAPPC4-213ENST00000533149 SEC16BQ96JE7 1060 aa10.65□□□□□ -0.7
TRAPPC4-213ENST00000533149 NRTNQ99748 197 aa10.65□□□□□ -0.7
TRAPPC4-213ENST00000533149 NOL11Q9H8H0 719 aaKnown RBP10.65□□□□□ -0.7
TRAPPC4-213ENST00000533149 IPPKQ9H8X2 491 aa10.65□□□□□ -0.7
TRAPPC4-213ENST00000533149 KCNK13Q9HB14 408 aa10.65□□□□□ -0.7
TRAPPC4-213ENST00000533149 TNFRSF12AQ9NP84 129 aa10.65□□□□□ -0.7
TRAPPC4-213ENST00000533149 CUTCQ9NTM9 273 aa10.65□□□□□ -0.7
TRAPPC4-213ENST00000533149 DNAJB12Q9NXW2 375 aaKnown RBP10.65□□□□□ -0.7
TRAPPC4-213ENST00000533149 STMN3Q9NZ72 180 aa10.65□□□□□ -0.7
TRAPPC4-213ENST00000533149 KLHL14Q9P2G3 628 aa10.65□□□□□ -0.7
TRAPPC4-213ENST00000533149 TEKT2Q9UIF3 430 aa10.65□□□□□ -0.7
TRAPPC4-213ENST00000533149 DCTN4Q9UJW0 460 aa10.65□□□□□ -0.7
TRAPPC4-213ENST00000533149 PLAGL1Q9UM63 463 aa10.65□□□□□ -0.7
TRAPPC4-213ENST00000533149 TRAF6Q9Y4K3 522 aa10.65□□□□□ -0.7
TRAPPC4-213ENST00000533149 ACANP16112 2415 aa10.65□□□□□ -0.7
TRAPPC4-213ENST00000533149 KIAA1324LA8MWY0 1029 aaPredicted RBP10.64□□□□□ -0.71
TRAPPC4-213ENST00000533149 NPIPA5E9PKD4 350 aa10.64□□□□□ -0.71
TRAPPC4-213ENST00000533149 SLCO1B7G3V0H7 640 aa10.64□□□□□ -0.71
TRAPPC4-213ENST00000533149 OR7A17O14581 309 aa10.64□□□□□ -0.71
TRAPPC4-213ENST00000533149 FGF4P08620 206 aa10.64□□□□□ -0.71
TRAPPC4-213ENST00000533149 HOXD4P09016 255 aaPredicted RBP10.64□□□□□ -0.71
TRAPPC4-213ENST00000533149 COX6A1P12074 109 aa10.64□□□□□ -0.71
TRAPPC4-213ENST00000533149 ICAM2P13598 275 aa10.64□□□□□ -0.71
TRAPPC4-213ENST00000533149 EPB42P16452 691 aa10.64□□□□□ -0.71
TRAPPC4-213ENST00000533149 DNASE1P24855 282 aa10.64□□□□□ -0.71
TRAPPC4-213ENST00000533149 CXCR2P25025 360 aa10.64□□□□□ -0.71
TRAPPC4-213ENST00000533149 MSX1P28360 303 aa10.64□□□□□ -0.71
TRAPPC4-213ENST00000533149 PIK3CGP48736 1102 aa10.64□□□□□ -0.71
TRAPPC4-213ENST00000533149 PKNOX1P55347 436 aa10.64□□□□□ -0.71
TRAPPC4-213ENST00000533149 KLC1Q07866 573 aa10.64□□□□□ -0.71
TRAPPC4-213ENST00000533149 GRM7Q14831 915 aa10.64□□□□□ -0.71
TRAPPC4-213ENST00000533149 SH2D4BQ5SQS7 431 aa10.64□□□□□ -0.71
TRAPPC4-213ENST00000533149 LRRC70Q7Z2Q7 622 aa10.64□□□□□ -0.71
TRAPPC4-213ENST00000533149 PRIMA1Q86XR5 153 aa10.64□□□□□ -0.71
TRAPPC4-213ENST00000533149 MCATQ8IVS2 390 aaKnown RBP10.64□□□□□ -0.71
TRAPPC4-213ENST00000533149 WDR75Q8IWA0 830 aaKnown RBP10.64□□□□□ -0.71
TRAPPC4-213ENST00000533149 CLYBLQ8N0X4 340 aa10.64□□□□□ -0.71
TRAPPC4-213ENST00000533149 GHDCQ8N2G8 530 aa10.64□□□□□ -0.71
TRAPPC4-213ENST00000533149 SNX31Q8N9S9 440 aa10.64□□□□□ -0.71
TRAPPC4-213ENST00000533149 LMNTD1Q8N9Z9 388 aa10.64□□□□□ -0.71
TRAPPC4-213ENST00000533149 AGR3Q8TD06 166 aa10.64□□□□□ -0.71
TRAPPC4-213ENST00000533149 NUDT8Q8WV74 236 aa10.64□□□□□ -0.71
TRAPPC4-213ENST00000533149 ZDHHC19Q8WVZ1 309 aaPredicted RBP10.64□□□□□ -0.71
TRAPPC4-213ENST00000533149 MIEF2Q96C03 454 aa10.64□□□□□ -0.71
TRAPPC4-213ENST00000533149 PYCR2Q96C36 320 aa10.64□□□□□ -0.71
TRAPPC4-213ENST00000533149 C8orf44Q96CB5 159 aa10.64□□□□□ -0.71
TRAPPC4-213ENST00000533149 C18orf12Q96KH6 178 aa10.64□□□□□ -0.71
TRAPPC4-213ENST00000533149 IL17FQ96PD4 163 aa10.64□□□□□ -0.71
TRAPPC4-213ENST00000533149 MID1IP1Q9NPA3 183 aa10.64□□□□□ -0.71
TRAPPC4-213ENST00000533149 KCNJ16Q9NPI9 418 aa10.64□□□□□ -0.71
TRAPPC4-213ENST00000533149 NPDC1Q9NQX5 325 aaPredicted RBP10.64□□□□□ -0.71
TRAPPC4-213ENST00000533149 PLSCR2Q9NRY7 297 aa10.64□□□□□ -0.71
TRAPPC4-213ENST00000533149 DNAJC11Q9NVH1 559 aa10.64□□□□□ -0.71
TRAPPC4-213ENST00000533149 INTS7Q9NVH2 962 aaKnown RBP10.64□□□□□ -0.71
TRAPPC4-213ENST00000533149 OR6C2Q9NZP2 312 aa10.64□□□□□ -0.71
TRAPPC4-213ENST00000533149 ZNF282Q9UDV7 671 aaPredicted RBP10.64□□□□□ -0.71
TRAPPC4-213ENST00000533149 POLG2Q9UHN1 485 aa10.64□□□□□ -0.71
TRAPPC4-213ENST00000533149 C3orf18Q9UK00 162 aa10.64□□□□□ -0.71
TRAPPC4-213ENST00000533149 NPIPA1Q9UND3 350 aa10.64□□□□□ -0.71
TRAPPC4-213ENST00000533149 ICKQ9UPZ9 632 aa10.64□□□□□ -0.71
TRAPPC4-213ENST00000533149 SLC22A14Q9Y267 594 aa10.64□□□□□ -0.71
TRAPPC4-213ENST00000533149 USH1CQ9Y6N9 552 aa10.64□□□□□ -0.71
TRAPPC4-213ENST00000533149 ABCA4P78363 2273 aa10.64□□□□□ -0.71
TRAPPC4-213ENST00000533149 A0A0G2JND7 137 aa10.63□□□□□ -0.71
TRAPPC4-213ENST00000533149 A0A1W2PQ72 361 aa10.63□□□□□ -0.71
TRAPPC4-213ENST00000533149 FAM171A2A8MVW0 826 aa10.63□□□□□ -0.71
TRAPPC4-213ENST00000533149 TMEM233B4DJY2 109 aa10.63□□□□□ -0.71
TRAPPC4-213ENST00000533149 ZNF195O14628 629 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms