RNA–Protein interactions for RNA: ENST00000533115.5

SSSCA1-207, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3

Gene SSSCA1, Length 1,077 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-207ENST00000533115 SORBS1Q9BX66 1292 aaKnown RBP28.29■■■□□ 2.12
SSSCA1-207ENST00000533115 ADAP2Q9NPF8 381 aa28.29■■■□□ 2.12
SSSCA1-207ENST00000533115 PCTPQ9UKL6 214 aa28.29■■■□□ 2.12
SSSCA1-207ENST00000533115 PTX3P26022 381 aaPredicted RBP28.28■■■□□ 2.12
SSSCA1-207ENST00000533115 TPP2P29144 1249 aaPredicted RBP28.28■■■□□ 2.12
SSSCA1-207ENST00000533115 CLCN2P51788 898 aa28.28■■■□□ 2.12
SSSCA1-207ENST00000533115 MLF1P58340 268 aa28.28■■■□□ 2.12
SSSCA1-207ENST00000533115 OC90Q02509 493 aaPredicted RBP28.28■■■□□ 2.12
SSSCA1-207ENST00000533115 STX4Q12846 297 aa28.28■■■□□ 2.12
SSSCA1-207ENST00000533115 SLC29A2Q14542 456 aa28.28■■■□□ 2.12
SSSCA1-207ENST00000533115 SPINK14Q6IE38 97 aa28.28■■■□□ 2.12
SSSCA1-207ENST00000533115 OR52B6Q8NGF0 335 aa28.28■■■□□ 2.12
SSSCA1-207ENST00000533115 DNAJB8Q8NHS0 232 aa28.28■■■□□ 2.12
SSSCA1-207ENST00000533115 WDR20Q8TBZ3 569 aa28.28■■■□□ 2.12
SSSCA1-207ENST00000533115 NR4A3Q92570 626 aa28.28■■■□□ 2.12
SSSCA1-207ENST00000533115 CDK15Q96Q40 435 aa28.28■■■□□ 2.12
SSSCA1-207ENST00000533115 ALOXE3Q9BYJ1 711 aa28.28■■■□□ 2.12
SSSCA1-207ENST00000533115 FBXW2Q9UKT8 454 aa28.28■■■□□ 2.12
SSSCA1-207ENST00000533115 POLEQ07864 2286 aa28.28■■■□□ 2.12
SSSCA1-207ENST00000533115 SVILO95425 2214 aa28.27■■■□□ 2.12
SSSCA1-207ENST00000533115 TRBV11-1A0A0K0K1C0 115 aa28.27■■■□□ 2.12
SSSCA1-207ENST00000533115 PLPP1O14494 284 aa28.27■■■□□ 2.12
SSSCA1-207ENST00000533115 CRYABP02511 175 aaKnown RBP28.27■■■□□ 2.12
SSSCA1-207ENST00000533115 IFNA16P05015 189 aa28.27■■■□□ 2.12
SSSCA1-207ENST00000533115 CPN2P22792 545 aa28.27■■■□□ 2.12
SSSCA1-207ENST00000533115 ARL1P40616 181 aaPredicted RBP28.27■■■□□ 2.12
SSSCA1-207ENST00000533115 GPR143P51810 404 aa28.27■■■□□ 2.12
SSSCA1-207ENST00000533115 CCNG1P51959 295 aa28.27■■■□□ 2.12
SSSCA1-207ENST00000533115 ARFIP1P53367 373 aa28.27■■■□□ 2.12
SSSCA1-207ENST00000533115 SLAMF1Q13291 335 aa28.27■■■□□ 2.12
SSSCA1-207ENST00000533115 ZRSR2Q15696 482 aaKnown RBP28.27■■■□□ 2.12
SSSCA1-207ENST00000533115 ELAVL1Q15717 326 aaKnown RBP28.27■■■□□ 2.12
SSSCA1-207ENST00000533115 ARMC10Q8N2F6 343 aa28.27■■■□□ 2.12
SSSCA1-207ENST00000533115 HORMAD2Q8N7B1 307 aa28.27■■■□□ 2.12
SSSCA1-207ENST00000533115 VMP1Q96GC9 406 aa28.27■■■□□ 2.12
SSSCA1-207ENST00000533115 NTMT1Q9BV86 223 aa28.27■■■□□ 2.12
SSSCA1-207ENST00000533115 PSD3Q9NYI0 1048 aa28.27■■■□□ 2.12
SSSCA1-207ENST00000533115 SPTAN1Q13813 2472 aaKnown RBP28.26■■■□□ 2.11
SSSCA1-207ENST00000533115 SBK3P0C264 359 aa28.26■■■□□ 2.11
SSSCA1-207ENST00000533115 CD46P15529 392 aa28.26■■■□□ 2.11
SSSCA1-207ENST00000533115 TDGF1P3P51864 188 aa28.26■■■□□ 2.11
SSSCA1-207ENST00000533115 ZNF468Q5VIY5 522 aaPredicted RBP28.26■■■□□ 2.11
SSSCA1-207ENST00000533115 GSPT2Q8IYD1 628 aaKnown RBP28.26■■■□□ 2.11
SSSCA1-207ENST00000533115 TMEM132CQ8N3T6 1108 aa28.26■■■□□ 2.11
SSSCA1-207ENST00000533115 ZCCHC7Q8N3Z6 543 aaKnown RBP28.26■■■□□ 2.11
SSSCA1-207ENST00000533115 TMEM151AQ8N4L1 468 aa28.26■■■□□ 2.11
SSSCA1-207ENST00000533115 NCLNQ969V3 563 aa28.26■■■□□ 2.11
SSSCA1-207ENST00000533115 SCMH1Q96GD3 660 aa28.26■■■□□ 2.11
SSSCA1-207ENST00000533115 NSUN5Q96P11 429 aaKnown RBP28.26■■■□□ 2.11
SSSCA1-207ENST00000533115 EPB41L4BQ9H329 900 aa28.26■■■□□ 2.11
SSSCA1-207ENST00000533115 ZBTB26Q9HCK0 441 aa28.26■■■□□ 2.11
SSSCA1-207ENST00000533115 KLHL1Q9NR64 748 aa28.26■■■□□ 2.11
SSSCA1-207ENST00000533115 LRFN1Q9P244 771 aa28.26■■■□□ 2.11
SSSCA1-207ENST00000533115 VTI1BQ9UEU0 232 aa28.26■■■□□ 2.11
SSSCA1-207ENST00000533115 FETUBQ9UGM5 382 aa28.26■■■□□ 2.11
SSSCA1-207ENST00000533115 ERRFI1Q9UJM3 462 aaPredicted RBP28.26■■■□□ 2.11
SSSCA1-207ENST00000533115 ZNF223Q9UK11 482 aaPredicted RBP28.26■■■□□ 2.11
SSSCA1-207ENST00000533115 SLC5A6Q9Y289 635 aa28.26■■■□□ 2.11
SSSCA1-207ENST00000533115 MYOCOSA0A1B0GUC4 107 aa28.25■■■□□ 2.11
SSSCA1-207ENST00000533115 FOXE1O00358 373 aaPredicted RBP28.25■■■□□ 2.11
SSSCA1-207ENST00000533115 LDB3O75112 727 aa28.25■■■□□ 2.11
SSSCA1-207ENST00000533115 NEURL1O76050 574 aa28.25■■■□□ 2.11
SSSCA1-207ENST00000533115 NEK2P51955 445 aa28.25■■■□□ 2.11
SSSCA1-207ENST00000533115 CUL3Q13618 768 aa28.25■■■□□ 2.11
SSSCA1-207ENST00000533115 SERTAD2Q14140 314 aa28.25■■■□□ 2.11
SSSCA1-207ENST00000533115 EIF1ADQ8N9N8 165 aaKnown RBP28.25■■■□□ 2.11
SSSCA1-207ENST00000533115 C5orf34Q96MH7 638 aa28.25■■■□□ 2.11
SSSCA1-207ENST00000533115 HES7Q9BYE0 225 aa28.25■■■□□ 2.11
SSSCA1-207ENST00000533115 L2HGDHQ9H9P8 463 aa28.25■■■□□ 2.11
SSSCA1-207ENST00000533115 MS4A12Q9NXJ0 267 aa28.25■■■□□ 2.11
SSSCA1-207ENST00000533115 CLCA3PQ9Y6N3 262 aa28.25■■■□□ 2.11
SSSCA1-207ENST00000533115 IQANK1A0A1B0GTG1 560 aa28.24■■■□□ 2.11
SSSCA1-207ENST00000533115 FCHO1O14526 889 aa28.24■■■□□ 2.11
SSSCA1-207ENST00000533115 DDAH2O95865 285 aa28.24■■■□□ 2.11
SSSCA1-207ENST00000533115 RPS17P08708 135 aaKnown RBP28.24■■■□□ 2.11
SSSCA1-207ENST00000533115 TRHRP34981 398 aaPredicted RBP28.24■■■□□ 2.11
SSSCA1-207ENST00000533115 PMP22Q01453 160 aa28.24■■■□□ 2.11
SSSCA1-207ENST00000533115 TRAF3Q13114 568 aa28.24■■■□□ 2.11
SSSCA1-207ENST00000533115 GPR180Q86V85 440 aa28.24■■■□□ 2.11
SSSCA1-207ENST00000533115 THAP3Q8WTV1 239 aaPredicted RBP28.24■■■□□ 2.11
SSSCA1-207ENST00000533115 DAZLQ92904 295 aaKnown RBP28.24■■■□□ 2.11
SSSCA1-207ENST00000533115 CCDC77Q9BR77 488 aa28.24■■■□□ 2.11
SSSCA1-207ENST00000533115 ZNF717Q9BY31 904 aaPredicted RBP28.24■■■□□ 2.11
SSSCA1-207ENST00000533115 TRIM45Q9H8W5 580 aaPredicted RBP28.24■■■□□ 2.11
SSSCA1-207ENST00000533115 SEMA4BQ9NPR2 832 aaPredicted RBP28.24■■■□□ 2.11
SSSCA1-207ENST00000533115 PSMC3IPQ9P2W1 217 aaPredicted RBP28.24■■■□□ 2.11
SSSCA1-207ENST00000533115 OSGIN2Q9Y236 505 aa28.24■■■□□ 2.11
SSSCA1-207ENST00000533115 UTP20O75691 2785 aaKnown RBP28.24■■■□□ 2.11
SSSCA1-207ENST00000533115 A8MT66 165 aa28.23■■■□□ 2.11
SSSCA1-207ENST00000533115 ETHE1O95571 254 aa28.23■■■□□ 2.11
SSSCA1-207ENST00000533115 RNF224P0DH78 156 aa28.23■■■□□ 2.11
SSSCA1-207ENST00000533115 CYB561P49447 251 aa28.23■■■□□ 2.11
SSSCA1-207ENST00000533115 TEX35Q5T0J7 233 aa28.23■■■□□ 2.11
SSSCA1-207ENST00000533115 LCA5Q86VQ0 697 aa28.23■■■□□ 2.11
SSSCA1-207ENST00000533115 TMEM178AQ8NBL3 297 aa28.23■■■□□ 2.11
SSSCA1-207ENST00000533115 C7orf57Q8NEG2 295 aa28.23■■■□□ 2.11
SSSCA1-207ENST00000533115 OR14A16Q8NHC5 309 aa28.23■■■□□ 2.11
SSSCA1-207ENST00000533115 PTPMT1Q8WUK0 201 aaPredicted RBP28.23■■■□□ 2.11
SSSCA1-207ENST00000533115 ANKRD9Q96BM1 317 aaPredicted RBP28.23■■■□□ 2.11
SSSCA1-207ENST00000533115 MTFMTQ96DP5 389 aaKnown RBP28.23■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms