RNA–Protein interactions for RNA: ENST00000532550.1

PHRF1-204, Transcript of PHD and ring finger domains 1, humanhuman

TSL 3

Gene PHRF1, Length 748 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-204ENST00000532550 SMIM24O75264 130 aa16.09■□□□□ 0.17
PHRF1-204ENST00000532550 SIX3O95343 332 aaPredicted RBP16.09■□□□□ 0.17
PHRF1-204ENST00000532550 LDLRP01130 860 aa16.09■□□□□ 0.17
PHRF1-204ENST00000532550 SP1P08047 785 aa16.09■□□□□ 0.17
PHRF1-204ENST00000532550 SNRPAP09012 282 aaKnown RBP16.09■□□□□ 0.17
PHRF1-204ENST00000532550 TNNI3P19429 210 aa16.09■□□□□ 0.17
PHRF1-204ENST00000532550 CPN2P22792 545 aa16.09■□□□□ 0.17
PHRF1-204ENST00000532550 TPP2P29144 1249 aaPredicted RBP16.09■□□□□ 0.17
PHRF1-204ENST00000532550 ARL1P40616 181 aaPredicted RBP16.09■□□□□ 0.17
PHRF1-204ENST00000532550 ELAVL1Q15717 326 aaKnown RBP16.09■□□□□ 0.17
PHRF1-204ENST00000532550 CPSF6Q16630 551 aaKnown RBP eCLIP16.09■□□□□ 0.17
PHRF1-204ENST00000532550 C4orf17Q53FE4 359 aa16.09■□□□□ 0.17
PHRF1-204ENST00000532550 SLC25A25Q6KCM7 469 aa16.09■□□□□ 0.17
PHRF1-204ENST00000532550 GFRALQ6UXV0 394 aa16.09■□□□□ 0.17
PHRF1-204ENST00000532550 ZNF793Q6ZN11 406 aa16.09■□□□□ 0.17
PHRF1-204ENST00000532550 TRMT10CQ7L0Y3 403 aaKnown RBP16.09■□□□□ 0.17
PHRF1-204ENST00000532550 PTGR2Q8N8N7 351 aaPredicted RBP16.09■□□□□ 0.17
PHRF1-204ENST00000532550 APCDD1LQ8NCL9 501 aa16.09■□□□□ 0.17
PHRF1-204ENST00000532550 C7orf57Q8NEG2 295 aa16.09■□□□□ 0.17
PHRF1-204ENST00000532550 THAP3Q8WTV1 239 aaPredicted RBP16.09■□□□□ 0.17
PHRF1-204ENST00000532550 VMP1Q96GC9 406 aa16.09■□□□□ 0.17
PHRF1-204ENST00000532550 MTERF1Q99551 399 aaKnown RBP16.09■□□□□ 0.17
PHRF1-204ENST00000532550 NOL11Q9H8H0 719 aaKnown RBP16.09■□□□□ 0.17
PHRF1-204ENST00000532550 VTI1BQ9UEU0 232 aa16.09■□□□□ 0.17
PHRF1-204ENST00000532550 PLEKHB1Q9UF11 243 aaPredicted RBP16.09■□□□□ 0.17
PHRF1-204ENST00000532550 TSC22D4Q9Y3Q8 395 aa16.09■□□□□ 0.17
PHRF1-204ENST00000532550 CLDN16Q9Y5I7 305 aa16.09■□□□□ 0.17
PHRF1-204ENST00000532550 MYOCOSA0A1B0GUC4 107 aa16.08■□□□□ 0.16
PHRF1-204ENST00000532550 SCELO95171 688 aa16.08■□□□□ 0.16
PHRF1-204ENST00000532550 CLDN9O95484 217 aa16.08■□□□□ 0.16
PHRF1-204ENST00000532550 RHOXF2BP0C7M4 288 aa16.08■□□□□ 0.16
PHRF1-204ENST00000532550 RNF224P0DH78 156 aa16.08■□□□□ 0.16
PHRF1-204ENST00000532550 PPP2R1BP30154 601 aa16.08■□□□□ 0.16
PHRF1-204ENST00000532550 TDGF1P3P51864 188 aa16.08■□□□□ 0.16
PHRF1-204ENST00000532550 RPS13P62277 151 aaKnown RBP16.08■□□□□ 0.16
PHRF1-204ENST00000532550 SRSF11Q05519 484 aaKnown RBP16.08■□□□□ 0.16
PHRF1-204ENST00000532550 SLAMF1Q13291 335 aa16.08■□□□□ 0.16
PHRF1-204ENST00000532550 SERTAD2Q14140 314 aa16.08■□□□□ 0.16
PHRF1-204ENST00000532550 MAPKAPK3Q16644 382 aa16.08■□□□□ 0.16
PHRF1-204ENST00000532550 ZNF468Q5VIY5 522 aaPredicted RBP16.08■□□□□ 0.16
PHRF1-204ENST00000532550 MYO7BQ6PIF6 2116 aa16.08■□□□□ 0.16
PHRF1-204ENST00000532550 RNF175Q8N4F7 328 aa16.08■□□□□ 0.16
PHRF1-204ENST00000532550 L3MBTL4Q8NA19 623 aa16.08■□□□□ 0.16
PHRF1-204ENST00000532550 FAM98AQ8NCA5 519 aaKnown RBP16.08■□□□□ 0.16
PHRF1-204ENST00000532550 DAZLQ92904 295 aaKnown RBP16.08■□□□□ 0.16
PHRF1-204ENST00000532550 NCLNQ969V3 563 aa16.08■□□□□ 0.16
PHRF1-204ENST00000532550 TMEM125Q96AQ2 219 aa16.08■□□□□ 0.16
PHRF1-204ENST00000532550 SCMH1Q96GD3 660 aa16.08■□□□□ 0.16
PHRF1-204ENST00000532550 MRPL57Q9BQC6 102 aaKnown RBP16.08■□□□□ 0.16
PHRF1-204ENST00000532550 RHOXF2Q9BQY4 288 aa16.08■□□□□ 0.16
PHRF1-204ENST00000532550 HES7Q9BYE0 225 aa16.08■□□□□ 0.16
PHRF1-204ENST00000532550 DMRT3Q9NQL9 472 aa16.08■□□□□ 0.16
PHRF1-204ENST00000532550 MS4A12Q9NXJ0 267 aa16.08■□□□□ 0.16
PHRF1-204ENST00000532550 SEC14L3Q9UDX4 400 aa16.08■□□□□ 0.16
PHRF1-204ENST00000532550 PPIEQ9UNP9 301 aaKnown RBP16.08■□□□□ 0.16
PHRF1-204ENST00000532550 RNF11Q9Y3C5 154 aa16.08■□□□□ 0.16
PHRF1-204ENST00000532550 UTP20O75691 2785 aaKnown RBP16.08■□□□□ 0.16
PHRF1-204ENST00000532550 NAV2Q8IVL1 2488 aa16.07■□□□□ 0.16
PHRF1-204ENST00000532550 A0A1B0GUH1 482 aa16.07■□□□□ 0.16
PHRF1-204ENST00000532550 CYSRT1A8MQ03 144 aa16.07■□□□□ 0.16
PHRF1-204ENST00000532550 STX16-NPEPL1H3BU86 382 aa16.07■□□□□ 0.16
PHRF1-204ENST00000532550 STX16O14662 325 aa16.07■□□□□ 0.16
PHRF1-204ENST00000532550 LDB3O75112 727 aa16.07■□□□□ 0.16
PHRF1-204ENST00000532550 NEURL1O76050 574 aa16.07■□□□□ 0.16
PHRF1-204ENST00000532550 ZFAND5O76080 213 aa16.07■□□□□ 0.16
PHRF1-204ENST00000532550 UNC5CO95185 931 aa16.07■□□□□ 0.16
PHRF1-204ENST00000532550 MLYCDO95822 493 aa16.07■□□□□ 0.16
PHRF1-204ENST00000532550 ABHD2P08910 425 aa16.07■□□□□ 0.16
PHRF1-204ENST00000532550 MST1P26927 711 aa16.07■□□□□ 0.16
PHRF1-204ENST00000532550 TLX1P31314 330 aaPredicted RBP16.07■□□□□ 0.16
PHRF1-204ENST00000532550 TRHRP34981 398 aaPredicted RBP16.07■□□□□ 0.16
PHRF1-204ENST00000532550 HLCSP50747 726 aa16.07■□□□□ 0.16
PHRF1-204ENST00000532550 GPR143P51810 404 aa16.07■□□□□ 0.16
PHRF1-204ENST00000532550 CCNG1P51959 295 aa16.07■□□□□ 0.16
PHRF1-204ENST00000532550 ARFIP1P53367 373 aa16.07■□□□□ 0.16
PHRF1-204ENST00000532550 PER3P56645 1201 aa16.07■□□□□ 0.16
PHRF1-204ENST00000532550 KCNK10P57789 538 aa16.07■□□□□ 0.16
PHRF1-204ENST00000532550 PMP22Q01453 160 aa16.07■□□□□ 0.16
PHRF1-204ENST00000532550 ZRSR2Q15696 482 aaKnown RBP16.07■□□□□ 0.16
PHRF1-204ENST00000532550 GALNTL5Q7Z4T8 443 aa16.07■□□□□ 0.16
PHRF1-204ENST00000532550 ARMC10Q8N2F6 343 aa16.07■□□□□ 0.16
PHRF1-204ENST00000532550 TMEM156Q8N614 296 aa16.07■□□□□ 0.16
PHRF1-204ENST00000532550 MORN4Q8NDC4 146 aa16.07■□□□□ 0.16
PHRF1-204ENST00000532550 SORBS1Q9BX66 1292 aaKnown RBP16.07■□□□□ 0.16
PHRF1-204ENST00000532550 PSD3Q9NYI0 1048 aa16.07■□□□□ 0.16
PHRF1-204ENST00000532550 XPR1Q9UBH6 696 aa16.07■□□□□ 0.16
PHRF1-204ENST00000532550 A1L4Q6 167 aa16.06■□□□□ 0.16
PHRF1-204ENST00000532550 SLC25A12O75746 678 aa16.06■□□□□ 0.16
PHRF1-204ENST00000532550 STSP08842 583 aa16.06■□□□□ 0.16
PHRF1-204ENST00000532550 NEK2P51955 445 aa16.06■□□□□ 0.16
PHRF1-204ENST00000532550 ALDH6A1Q02252 535 aaKnown RBP16.06■□□□□ 0.16
PHRF1-204ENST00000532550 RBPJQ06330 500 aa16.06■□□□□ 0.16
PHRF1-204ENST00000532550 BIKQ13323 160 aa16.06■□□□□ 0.16
PHRF1-204ENST00000532550 PNPLA5Q7Z6Z6 429 aaPredicted RBP16.06■□□□□ 0.16
PHRF1-204ENST00000532550 GPR180Q86V85 440 aa16.06■□□□□ 0.16
PHRF1-204ENST00000532550 OR14A16Q8NHC5 309 aa16.06■□□□□ 0.16
PHRF1-204ENST00000532550 PTPMT1Q8WUK0 201 aaPredicted RBP16.06■□□□□ 0.16
PHRF1-204ENST00000532550 MTFMTQ96DP5 389 aaKnown RBP16.06■□□□□ 0.16
PHRF1-204ENST00000532550 MTBPQ96DY7 904 aa16.06■□□□□ 0.16
PHRF1-204ENST00000532550 CDK15Q96Q40 435 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms