RNA–Protein interactions for RNA: ENST00000532457.5

PACSIN3-209, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

TSL 5

Gene PACSIN3, Length 1,845 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-209ENST00000532457 ZMYND15Q9H091 742 aa20.78■□□□□ 0.92
PACSIN3-209ENST00000532457 TOR4AQ9NXH8 423 aa20.78■□□□□ 0.92
PACSIN3-209ENST00000532457 ADA2Q9NZK5 511 aa20.78■□□□□ 0.92
PACSIN3-209ENST00000532457 CD300AQ9UGN4 299 aa20.78■□□□□ 0.92
PACSIN3-209ENST00000532457 PRPF19Q9UMS4 504 aaKnown RBP20.78■□□□□ 0.92
PACSIN3-209ENST00000532457 PCDHB14Q9Y5E9 798 aa20.78■□□□□ 0.92
PACSIN3-209ENST00000532457 TRBV5-3A0A0A0MS03 114 aa20.78■□□□□ 0.92
PACSIN3-209ENST00000532457 GLOD5A6NK44 160 aa20.78■□□□□ 0.92
PACSIN3-209ENST00000532457 NME4O00746 187 aa20.78■□□□□ 0.92
PACSIN3-209ENST00000532457 PROM1O43490 865 aa20.78■□□□□ 0.92
PACSIN3-209ENST00000532457 FOLR1P15328 257 aa20.78■□□□□ 0.92
PACSIN3-209ENST00000532457 ALDH9A1P49189 494 aa20.78■□□□□ 0.92
PACSIN3-209ENST00000532457 OLR1P78380 273 aa20.78■□□□□ 0.92
PACSIN3-209ENST00000532457 TGM3Q08188 693 aa20.78■□□□□ 0.92
PACSIN3-209ENST00000532457 DNAJC14Q6Y2X3 702 aaPredicted RBP20.78■□□□□ 0.92
PACSIN3-209ENST00000532457 CARFQ8N187 725 aa20.78■□□□□ 0.92
PACSIN3-209ENST00000532457 D2HGDHQ8N465 521 aa20.78■□□□□ 0.92
PACSIN3-209ENST00000532457 FAM156AQ8NDB6 213 aa20.78■□□□□ 0.92
PACSIN3-209ENST00000532457 STARD8Q92502 1023 aa20.78■□□□□ 0.92
PACSIN3-209ENST00000532457 MTERF3Q96E29 417 aa20.78■□□□□ 0.92
PACSIN3-209ENST00000532457 ITCHQ96J02 903 aa20.78■□□□□ 0.92
PACSIN3-209ENST00000532457 PRPF18Q99633 342 aaKnown RBP20.78■□□□□ 0.92
PACSIN3-209ENST00000532457 DENND2DQ9H6A0 471 aaPredicted RBP20.78■□□□□ 0.92
PACSIN3-209ENST00000532457 PRSS51A0A1B0GVH4 220 aa20.77■□□□□ 0.92
PACSIN3-209ENST00000532457 SPAARA0A1B0GVQ0 90 aa20.77■□□□□ 0.92
PACSIN3-209ENST00000532457 PRORSD1PA6NEY8 169 aa20.77■□□□□ 0.92
PACSIN3-209ENST00000532457 URADA6NGE7 173 aa20.77■□□□□ 0.92
PACSIN3-209ENST00000532457 ZNF860A6NHJ4 632 aa20.77■□□□□ 0.92
PACSIN3-209ENST00000532457 MAP3K7O43318 606 aa20.77■□□□□ 0.92
PACSIN3-209ENST00000532457 KCNH1O95259 989 aa20.77■□□□□ 0.92
PACSIN3-209ENST00000532457 NPPAP01160 153 aa20.77■□□□□ 0.92
PACSIN3-209ENST00000532457 FTH1P19P0C7X4 201 aa20.77■□□□□ 0.92
PACSIN3-209ENST00000532457 PUM1Q14671 1186 aaKnown RBP eCLIP20.77■□□□□ 0.92
PACSIN3-209ENST00000532457 GPR19Q15760 415 aa20.77■□□□□ 0.92
PACSIN3-209ENST00000532457 MSANTD1Q6ZTZ1 278 aa20.77■□□□□ 0.92
PACSIN3-209ENST00000532457 ABHD13Q7L211 337 aa20.77■□□□□ 0.92
PACSIN3-209ENST00000532457 R3HCC1LQ7Z5L2 792 aaKnown RBP20.77■□□□□ 0.92
PACSIN3-209ENST00000532457 ZNF655Q8N720 491 aaPredicted RBP20.77■□□□□ 0.92
PACSIN3-209ENST00000532457 FAM47BQ8NA70 645 aa20.77■□□□□ 0.92
PACSIN3-209ENST00000532457 OR5T3Q8NGG3 340 aa20.77■□□□□ 0.92
PACSIN3-209ENST00000532457 C10orf90Q96M02 699 aa20.77■□□□□ 0.92
PACSIN3-209ENST00000532457 BHLHE41Q9C0J9 482 aaPredicted RBP20.77■□□□□ 0.92
PACSIN3-209ENST00000532457 IKZF5Q9H5V7 419 aa20.77■□□□□ 0.92
PACSIN3-209ENST00000532457 SYNDIG1Q9H7V2 258 aa20.77■□□□□ 0.92
PACSIN3-209ENST00000532457 SPAG4Q9NPE6 437 aa20.77■□□□□ 0.92
PACSIN3-209ENST00000532457 FAM120CQ9NX05 1096 aaKnown RBP20.77■□□□□ 0.92
PACSIN3-209ENST00000532457 PDP2Q9P2J9 529 aa20.77■□□□□ 0.92
PACSIN3-209ENST00000532457 ABCD2Q9UBJ2 740 aa20.77■□□□□ 0.92
PACSIN3-209ENST00000532457 MAPRE3Q9UPY8 281 aa20.77■□□□□ 0.92
PACSIN3-209ENST00000532457 NAALAD2Q9Y3Q0 740 aa20.77■□□□□ 0.92
PACSIN3-209ENST00000532457 SLC22A7Q9Y694 548 aa20.77■□□□□ 0.92
PACSIN3-209ENST00000532457 DCHS1Q96JQ0 3298 aa20.76■□□□□ 0.91
PACSIN3-209ENST00000532457 CPSF4O95639 269 aaKnown RBP20.76■□□□□ 0.91
PACSIN3-209ENST00000532457 CPNE6O95741 557 aa20.76■□□□□ 0.91
PACSIN3-209ENST00000532457 NELFEP18615 380 aaKnown RBP20.76■□□□□ 0.91
PACSIN3-209ENST00000532457 SPIDRQ14159 915 aa20.76■□□□□ 0.91
PACSIN3-209ENST00000532457 HEPACAMQ14CZ8 416 aa20.76■□□□□ 0.91
PACSIN3-209ENST00000532457 LRIF1Q5T3J3 769 aa20.76■□□□□ 0.91
PACSIN3-209ENST00000532457 GFM1Q96RP9 751 aaKnown RBP20.76■□□□□ 0.91
PACSIN3-209ENST00000532457 SERINC2Q96SA4 455 aa20.76■□□□□ 0.91
PACSIN3-209ENST00000532457 COPS7BQ9H9Q2 264 aaPredicted RBP20.76■□□□□ 0.91
PACSIN3-209ENST00000532457 SLAMF7Q9NQ25 335 aa20.76■□□□□ 0.91
PACSIN3-209ENST00000532457 CES1P1Q9UKY3 287 aa20.76■□□□□ 0.91
PACSIN3-209ENST00000532457 A0A096LPI6 279 aa20.76■□□□□ 0.91
PACSIN3-209ENST00000532457 DCDC2BA2VCK2 349 aa20.76■□□□□ 0.91
PACSIN3-209ENST00000532457 FOXS1O43638 330 aa20.76■□□□□ 0.91
PACSIN3-209ENST00000532457 GALR3O60755 368 aaPredicted RBP20.76■□□□□ 0.91
PACSIN3-209ENST00000532457 TBX19O60806 448 aa20.76■□□□□ 0.91
PACSIN3-209ENST00000532457 AIFM1O95831 613 aa20.76■□□□□ 0.91
PACSIN3-209ENST00000532457 HOXD11P31277 338 aaPredicted RBP20.76■□□□□ 0.91
PACSIN3-209ENST00000532457 LIM2P55344 173 aa20.76■□□□□ 0.91
PACSIN3-209ENST00000532457 MS4A2Q01362 244 aa20.76■□□□□ 0.91
PACSIN3-209ENST00000532457 FOXM1Q08050 763 aa20.76■□□□□ 0.91
PACSIN3-209ENST00000532457 RUNDC3AQ59EK9 446 aa20.76■□□□□ 0.91
PACSIN3-209ENST00000532457 ARHGAP22Q7Z5H3 698 aa20.76■□□□□ 0.91
PACSIN3-209ENST00000532457 AURKBQ96GD4 344 aaPredicted RBP20.76■□□□□ 0.91
PACSIN3-209ENST00000532457 CCDC115Q96NT0 180 aa20.76■□□□□ 0.91
PACSIN3-209ENST00000532457 ANKRD27Q96NW4 1050 aa20.76■□□□□ 0.91
PACSIN3-209ENST00000532457 TRIM4Q9C037 500 aa20.76■□□□□ 0.91
PACSIN3-209ENST00000532457 RMND5AQ9H871 391 aa20.76■□□□□ 0.91
PACSIN3-209ENST00000532457 MIEF1Q9NQG6 463 aa20.76■□□□□ 0.91
PACSIN3-209ENST00000532457 CNOT1A5YKK6 2376 aaKnown RBP20.75■□□□□ 0.91
PACSIN3-209ENST00000532457 IGHV5-10-1A0A0J9YXX1 117 aa20.75■□□□□ 0.91
PACSIN3-209ENST00000532457 H0YHG0 523 aa20.75■□□□□ 0.91
PACSIN3-209ENST00000532457 SGK494L7N484 410 aa20.75■□□□□ 0.91
PACSIN3-209ENST00000532457 AGRPO00253 132 aa20.75■□□□□ 0.91
PACSIN3-209ENST00000532457 RFXANKO14593 260 aa20.75■□□□□ 0.91
PACSIN3-209ENST00000532457 TCN1P20061 433 aaPredicted RBP20.75■□□□□ 0.91
PACSIN3-209ENST00000532457 GSTM5P46439 218 aa20.75■□□□□ 0.91
PACSIN3-209ENST00000532457 MTPNP58546 118 aa20.75■□□□□ 0.91
PACSIN3-209ENST00000532457 SLCO6A1Q86UG4 719 aa20.75■□□□□ 0.91
PACSIN3-209ENST00000532457 ARHGAP24Q8N264 748 aa20.75■□□□□ 0.91
PACSIN3-209ENST00000532457 RCBTB1Q8NDN9 531 aa20.75■□□□□ 0.91
PACSIN3-209ENST00000532457 OR9A4Q8NGU2 314 aa20.75■□□□□ 0.91
PACSIN3-209ENST00000532457 CCDC124Q96CT7 223 aaKnown RBP20.75■□□□□ 0.91
PACSIN3-209ENST00000532457 NLNQ9BYT8 704 aa20.75■□□□□ 0.91
PACSIN3-209ENST00000532457 ZNF768Q9H5H4 540 aaKnown RBP20.75■□□□□ 0.91
PACSIN3-209ENST00000532457 BTNL2Q9UIR0 455 aa20.75■□□□□ 0.91
PACSIN3-209ENST00000532457 USP22Q9UPT9 525 aa20.75■□□□□ 0.91
PACSIN3-209ENST00000532457 A0A1W2PS29 197 aa20.74■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms