RNA–Protein interactions for RNA: ENST00000532126.1

HMGB1P42-201, Transcript of high mobility group box 1 pseudogene 42, humanhuman

BASIC

Gene HMGB1P42, Length 553 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P42-201ENST00000532126 VSX2P58304 361 aaPredicted RBP5.5□□□□□ -1.53
HMGB1P42-201ENST00000532126 RAB10P61026 200 aa5.5□□□□□ -1.53
HMGB1P42-201ENST00000532126 ATP6V0D1P61421 351 aa5.5□□□□□ -1.53
HMGB1P42-201ENST00000532126 CYP4F2P78329 520 aa5.5□□□□□ -1.53
HMGB1P42-201ENST00000532126 MRPS35P82673 323 aaKnown RBP5.5□□□□□ -1.53
HMGB1P42-201ENST00000532126 SLC13A2Q13183 592 aa5.5□□□□□ -1.53
HMGB1P42-201ENST00000532126 NAE1Q13564 534 aa5.5□□□□□ -1.53
HMGB1P42-201ENST00000532126 HABP2Q14520 560 aaPredicted RBP5.5□□□□□ -1.53
HMGB1P42-201ENST00000532126 GRM7Q14831 915 aa5.5□□□□□ -1.53
HMGB1P42-201ENST00000532126 TSNQ15631 228 aaKnown RBP5.5□□□□□ -1.53
HMGB1P42-201ENST00000532126 ZKSCAN8Q15776 578 aaPredicted RBP5.5□□□□□ -1.53
HMGB1P42-201ENST00000532126 UAP1Q16222 522 aaPredicted RBP5.5□□□□□ -1.53
HMGB1P42-201ENST00000532126 MAPKAPK3Q16644 382 aa5.5□□□□□ -1.53
HMGB1P42-201ENST00000532126 FAM214AQ32MH5 1076 aa5.5□□□□□ -1.53
HMGB1P42-201ENST00000532126 PTCHD3Q3KNS1 767 aa5.5□□□□□ -1.53
HMGB1P42-201ENST00000532126 TCTE1Q5JU00 501 aa5.5□□□□□ -1.53
HMGB1P42-201ENST00000532126 WASHC2DQ5SRD0 308 aa5.5□□□□□ -1.53
HMGB1P42-201ENST00000532126 C1orf189Q5VU69 101 aa5.5□□□□□ -1.53
HMGB1P42-201ENST00000532126 HLA-DQA1Q5Y7H0 255 aa5.5□□□□□ -1.53
HMGB1P42-201ENST00000532126 ZNF425Q6IV72 752 aa5.5□□□□□ -1.53
HMGB1P42-201ENST00000532126 FBXO42Q6P3S6 717 aa5.5□□□□□ -1.53
HMGB1P42-201ENST00000532126 SBSNQ6UWP8 590 aa5.5□□□□□ -1.53
HMGB1P42-201ENST00000532126 ZNF517Q6ZMY9 492 aaPredicted RBP5.5□□□□□ -1.53
HMGB1P42-201ENST00000532126 RNF111Q6ZNA4 994 aa5.5□□□□□ -1.53
HMGB1P42-201ENST00000532126 C22orf34Q6ZV56 151 aa5.5□□□□□ -1.53
HMGB1P42-201ENST00000532126 MILR1Q7Z6M3 343 aa5.5□□□□□ -1.53
HMGB1P42-201ENST00000532126 ZSCAN2Q7Z7L9 614 aaPredicted RBP5.5□□□□□ -1.53
HMGB1P42-201ENST00000532126 ADAMTSL2Q86TH1 951 aa5.5□□□□□ -1.53
HMGB1P42-201ENST00000532126 PAQR7Q86WK9 346 aa5.5□□□□□ -1.53
HMGB1P42-201ENST00000532126 C17orf64Q86WR6 236 aa5.5□□□□□ -1.53
HMGB1P42-201ENST00000532126 LRRC56Q8IYG6 542 aaPredicted RBP5.5□□□□□ -1.53
HMGB1P42-201ENST00000532126 DSELQ8IZU8 1212 aa5.5□□□□□ -1.53
HMGB1P42-201ENST00000532126 SPATA6LQ8N4H0 392 aa5.5□□□□□ -1.53
HMGB1P42-201ENST00000532126 TTC29Q8NA56 475 aaPredicted RBP5.5□□□□□ -1.53
HMGB1P42-201ENST00000532126 PROKR1Q8TCW9 393 aa5.5□□□□□ -1.53
HMGB1P42-201ENST00000532126 RERGQ96A58 199 aaPredicted RBP5.5□□□□□ -1.53
HMGB1P42-201ENST00000532126 FBXL8Q96CD0 374 aa5.5□□□□□ -1.53
HMGB1P42-201ENST00000532126 FOXRED1Q96CU9 486 aaPredicted RBP5.5□□□□□ -1.53
HMGB1P42-201ENST00000532126 FAM120BQ96EK7 910 aaKnown RBP5.5□□□□□ -1.53
HMGB1P42-201ENST00000532126 UBL7Q96S82 380 aaPredicted RBP5.5□□□□□ -1.53
HMGB1P42-201ENST00000532126 EGFL8Q99944 293 aa5.5□□□□□ -1.53
HMGB1P42-201ENST00000532126 VRK1Q99986 396 aaPredicted RBP5.5□□□□□ -1.53
HMGB1P42-201ENST00000532126 C17orf62Q9BQA9 187 aa5.5□□□□□ -1.53
HMGB1P42-201ENST00000532126 HAUS8Q9BT25 410 aa5.5□□□□□ -1.53
HMGB1P42-201ENST00000532126 SGPP1Q9BX95 441 aa5.5□□□□□ -1.53
HMGB1P42-201ENST00000532126 FUT8Q9BYC5 575 aa5.5□□□□□ -1.53
HMGB1P42-201ENST00000532126 DERL2Q9GZP9 239 aa5.5□□□□□ -1.53
HMGB1P42-201ENST00000532126 CHST8Q9H2A9 424 aa5.5□□□□□ -1.53
HMGB1P42-201ENST00000532126 AKIRIN1Q9H9L7 192 aaPredicted RBP5.5□□□□□ -1.53
HMGB1P42-201ENST00000532126 STARD5Q9NSY2 213 aa5.5□□□□□ -1.53
HMGB1P42-201ENST00000532126 TMEM184CQ9NVA4 438 aa5.5□□□□□ -1.53
HMGB1P42-201ENST00000532126 DHCR7Q9UBM7 475 aaKnown RBP5.5□□□□□ -1.53
HMGB1P42-201ENST00000532126 TLK1Q9UKI8 766 aa5.5□□□□□ -1.53
HMGB1P42-201ENST00000532126 RALYQ9UKM9 306 aaKnown RBP5.5□□□□□ -1.53
HMGB1P42-201ENST00000532126 OARD1Q9Y530 152 aa5.5□□□□□ -1.53
HMGB1P42-201ENST00000532126 MRPS18BQ9Y676 258 aaKnown RBP5.5□□□□□ -1.53
HMGB1P42-201ENST00000532126 IKBKGQ9Y6K9 419 aa5.5□□□□□ -1.53
HMGB1P42-201ENST00000532126 URB1O60287 2271 aaKnown RBP5.5□□□□□ -1.53
HMGB1P42-201ENST00000532126 KIF26BQ2KJY2 2108 aa5.5□□□□□ -1.53
HMGB1P42-201ENST00000532126 A0A087X1B8 175 aa5.49□□□□□ -1.53
HMGB1P42-201ENST00000532126 LOC105369274A0A096LPK9 316 aa5.49□□□□□ -1.53
HMGB1P42-201ENST00000532126 IGKV1-8A0A0C4DH67 115 aa5.49□□□□□ -1.53
HMGB1P42-201ENST00000532126 LOC102723532A0A0G2JNH3 316 aa5.49□□□□□ -1.53
HMGB1P42-201ENST00000532126 A0A1B0GX78 115 aa5.49□□□□□ -1.53
HMGB1P42-201ENST00000532126 HYKKA2RU49 373 aa5.49□□□□□ -1.53
HMGB1P42-201ENST00000532126 FITM1A5D6W6 292 aa5.49□□□□□ -1.53
HMGB1P42-201ENST00000532126 MBD3L4A6NDZ8 208 aaPredicted RBP5.49□□□□□ -1.53
HMGB1P42-201ENST00000532126 MBD3L3A6NE82 208 aaPredicted RBP5.49□□□□□ -1.53
HMGB1P42-201ENST00000532126 NCF1BA6NI72 391 aaPredicted RBP5.49□□□□□ -1.53
HMGB1P42-201ENST00000532126 FAM90A27PA6NNH2 459 aa5.49□□□□□ -1.53
HMGB1P42-201ENST00000532126 NCF1CA8MVU1 366 aaPredicted RBP5.49□□□□□ -1.53
HMGB1P42-201ENST00000532126 H0YGG7 62 aa5.49□□□□□ -1.53
HMGB1P42-201ENST00000532126 HAT1O14929 419 aa5.49□□□□□ -1.53
HMGB1P42-201ENST00000532126 CREG1O75629 220 aa5.49□□□□□ -1.53
HMGB1P42-201ENST00000532126 WISP3O95389 354 aaPredicted RBP5.49□□□□□ -1.53
HMGB1P42-201ENST00000532126 ITGB2P05107 769 aa5.49□□□□□ -1.53
HMGB1P42-201ENST00000532126 INHBAP08476 426 aa5.49□□□□□ -1.53
HMGB1P42-201ENST00000532126 CD63P08962 238 aa5.49□□□□□ -1.53
HMGB1P42-201ENST00000532126 RAB40ALP0C0E4 278 aa5.49□□□□□ -1.53
HMGB1P42-201ENST00000532126 SLC35E2BP0CK96 405 aa5.49□□□□□ -1.53
HMGB1P42-201ENST00000532126 PIM1P11309 404 aaPredicted RBP5.49□□□□□ -1.53
HMGB1P42-201ENST00000532126 NCF1P14598 390 aaPredicted RBP5.49□□□□□ -1.53
HMGB1P42-201ENST00000532126 CD1DP15813 335 aa5.49□□□□□ -1.53
HMGB1P42-201ENST00000532126 MALP21145 153 aa5.49□□□□□ -1.53
HMGB1P42-201ENST00000532126 ABCD3P28288 659 aa5.49□□□□□ -1.53
HMGB1P42-201ENST00000532126 HPDP32754 393 aaPredicted RBP5.49□□□□□ -1.53
HMGB1P42-201ENST00000532126 SLC26A3P40879 764 aa5.49□□□□□ -1.53
HMGB1P42-201ENST00000532126 KCNC1P48547 511 aa5.49□□□□□ -1.53
HMGB1P42-201ENST00000532126 HNMTP50135 292 aa5.49□□□□□ -1.53
HMGB1P42-201ENST00000532126 SERPINB8P50452 374 aa5.49□□□□□ -1.53
HMGB1P42-201ENST00000532126 SEC24CP53992 1094 aa5.49□□□□□ -1.53
HMGB1P42-201ENST00000532126 PMS2P54278 862 aa5.49□□□□□ -1.53
HMGB1P42-201ENST00000532126 DCDP81605 110 aaKnown RBP5.49□□□□□ -1.53
HMGB1P42-201ENST00000532126 CDKL1Q00532 357 aa5.49□□□□□ -1.53
HMGB1P42-201ENST00000532126 RELAQ04206 551 aa5.49□□□□□ -1.53
HMGB1P42-201ENST00000532126 CDC20Q12834 499 aa5.49□□□□□ -1.53
HMGB1P42-201ENST00000532126 BMPR2Q13873 1038 aa5.49□□□□□ -1.53
HMGB1P42-201ENST00000532126 CSHL1Q14406 222 aa5.49□□□□□ -1.53
HMGB1P42-201ENST00000532126 NCF4Q15080 339 aa5.49□□□□□ -1.53
HMGB1P42-201ENST00000532126 PPP1R3AQ16821 1122 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms