RNA–Protein interactions for RNA: ENST00000531405.5

SSSCA1-206, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 2 BASIC

Gene SSSCA1, Length 879 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-206ENST00000531405 FOXO6A8MYZ6 492 aa17.07■□□□□ 0.32
SSSCA1-206ENST00000531405 CES2O00748 559 aa17.07■□□□□ 0.32
SSSCA1-206ENST00000531405 CTNSO60931 367 aa17.07■□□□□ 0.32
SSSCA1-206ENST00000531405 LDB3O75112 727 aa17.07■□□□□ 0.32
SSSCA1-206ENST00000531405 GLSO94925 669 aaPredicted RBP17.07■□□□□ 0.32
SSSCA1-206ENST00000531405 MAGEA5P43359 124 aa17.07■□□□□ 0.32
SSSCA1-206ENST00000531405 MTTPP55157 894 aa17.07■□□□□ 0.32
SSSCA1-206ENST00000531405 ID2Q02363 134 aa17.07■□□□□ 0.32
SSSCA1-206ENST00000531405 FRG1Q14331 258 aaKnown RBP17.07■□□□□ 0.32
SSSCA1-206ENST00000531405 ZNF585AQ6P3V2 769 aa17.07■□□□□ 0.32
SSSCA1-206ENST00000531405 ACAD11Q709F0 780 aa17.07■□□□□ 0.32
SSSCA1-206ENST00000531405 SLC22A16Q86VW1 577 aa17.07■□□□□ 0.32
SSSCA1-206ENST00000531405 TMEM251Q8N6I4 163 aa17.07■□□□□ 0.32
SSSCA1-206ENST00000531405 FBXO36Q8NEA4 188 aa17.07■□□□□ 0.32
SSSCA1-206ENST00000531405 OR10Q1Q8NGQ4 319 aa17.07■□□□□ 0.32
SSSCA1-206ENST00000531405 SMC6Q96SB8 1091 aa17.07■□□□□ 0.32
SSSCA1-206ENST00000531405 CAB39LQ9H9S4 337 aa17.07■□□□□ 0.32
SSSCA1-206ENST00000531405 PRDM7Q9NQW5 492 aa17.07■□□□□ 0.32
SSSCA1-206ENST00000531405 WWOXQ9NZC7 414 aa17.07■□□□□ 0.32
SSSCA1-206ENST00000531405 PRRC2AP48634 2157 aaKnown RBP17.06■□□□□ 0.32
SSSCA1-206ENST00000531405 ANKHD1Q8IWZ3 2542 aaKnown RBP17.06■□□□□ 0.32
SSSCA1-206ENST00000531405 TP73O15350 636 aa17.06■□□□□ 0.32
SSSCA1-206ENST00000531405 HOXD4P09016 255 aaPredicted RBP17.06■□□□□ 0.32
SSSCA1-206ENST00000531405 CELA3AP09093 270 aa17.06■□□□□ 0.32
SSSCA1-206ENST00000531405 CD22P20273 847 aa17.06■□□□□ 0.32
SSSCA1-206ENST00000531405 ACVR2AP27037 513 aa17.06■□□□□ 0.32
SSSCA1-206ENST00000531405 GSTM2P28161 218 aa17.06■□□□□ 0.32
SSSCA1-206ENST00000531405 HSPA7P48741 367 aa17.06■□□□□ 0.32
SSSCA1-206ENST00000531405 DNASE1L1P49184 302 aa17.06■□□□□ 0.32
SSSCA1-206ENST00000531405 ARL4CP56559 192 aa17.06■□□□□ 0.32
SSSCA1-206ENST00000531405 RNF4P78317 190 aa17.06■□□□□ 0.32
SSSCA1-206ENST00000531405 STX4Q12846 297 aa17.06■□□□□ 0.32
SSSCA1-206ENST00000531405 PDIA2Q13087 525 aaKnown RBP17.06■□□□□ 0.32
SSSCA1-206ENST00000531405 DOC2AQ14183 400 aa17.06■□□□□ 0.32
SSSCA1-206ENST00000531405 RTL4Q6ZR62 310 aa17.06■□□□□ 0.32
SSSCA1-206ENST00000531405 SNX31Q8N9S9 440 aa17.06■□□□□ 0.32
SSSCA1-206ENST00000531405 MORN4Q8NDC4 146 aa17.06■□□□□ 0.32
SSSCA1-206ENST00000531405 OR14A16Q8NHC5 309 aa17.06■□□□□ 0.32
SSSCA1-206ENST00000531405 SLC2A12Q8TD20 617 aa17.06■□□□□ 0.32
SSSCA1-206ENST00000531405 DAZLQ92904 295 aaKnown RBP17.06■□□□□ 0.32
SSSCA1-206ENST00000531405 VPS39Q96JC1 886 aa17.06■□□□□ 0.32
SSSCA1-206ENST00000531405 MAPKAP1Q9BPZ7 522 aa17.06■□□□□ 0.32
SSSCA1-206ENST00000531405 FAM173AQ9BQD7 235 aa17.06■□□□□ 0.32
SSSCA1-206ENST00000531405 TRIM31Q9BZY9 425 aa17.06■□□□□ 0.32
SSSCA1-206ENST00000531405 SMYD2Q9NRG4 433 aa17.06■□□□□ 0.32
SSSCA1-206ENST00000531405 DNAJC11Q9NVH1 559 aa17.06■□□□□ 0.32
SSSCA1-206ENST00000531405 MOCS1Q9NZB8 636 aa17.06■□□□□ 0.32
SSSCA1-206ENST00000531405 GPRC5BQ9NZH0 403 aa17.06■□□□□ 0.32
SSSCA1-206ENST00000531405 VTI1BQ9UEU0 232 aa17.06■□□□□ 0.32
SSSCA1-206ENST00000531405 FAM215AQ9Y5M1 114 aa17.06■□□□□ 0.32
SSSCA1-206ENST00000531405 ACANP16112 2415 aa17.06■□□□□ 0.32
SSSCA1-206ENST00000531405 EXPH5Q8NEV8 1989 aa17.06■□□□□ 0.32
SSSCA1-206ENST00000531405 C17orf105B2RV13 164 aa17.05■□□□□ 0.32
SSSCA1-206ENST00000531405 RTCAO00442 366 aaKnown RBP17.05■□□□□ 0.32
SSSCA1-206ENST00000531405 CLGNO14967 610 aa17.05■□□□□ 0.32
SSSCA1-206ENST00000531405 DIAPH2O60879 1101 aa17.05■□□□□ 0.32
SSSCA1-206ENST00000531405 WISP3O95389 354 aaPredicted RBP17.05■□□□□ 0.32
SSSCA1-206ENST00000531405 IGHG3P01860 377 aa17.05■□□□□ 0.32
SSSCA1-206ENST00000531405 CCL3P10147 92 aa17.05■□□□□ 0.32
SSSCA1-206ENST00000531405 TNNI3P19429 210 aa17.05■□□□□ 0.32
SSSCA1-206ENST00000531405 CNR1P21554 472 aa17.05■□□□□ 0.32
SSSCA1-206ENST00000531405 ART1P52961 327 aa17.05■□□□□ 0.32
SSSCA1-206ENST00000531405 DR1Q01658 176 aa17.05■□□□□ 0.32
SSSCA1-206ENST00000531405 MYBPHQ13203 477 aa17.05■□□□□ 0.32
SSSCA1-206ENST00000531405 EFTUD2Q15029 972 aaKnown RBP eCLIP17.05■□□□□ 0.323e-6■■■■■ 34.6
SSSCA1-206ENST00000531405 RTL6Q6ICC9 239 aa17.05■□□□□ 0.32
SSSCA1-206ENST00000531405 ZNF793Q6ZN11 406 aa17.05■□□□□ 0.32
SSSCA1-206ENST00000531405 RGS9BPQ6ZS82 235 aa17.05■□□□□ 0.32
SSSCA1-206ENST00000531405 GK5Q6ZS86 529 aa17.05■□□□□ 0.32
SSSCA1-206ENST00000531405 CAPN12Q6ZSI9 719 aa17.05■□□□□ 0.32
SSSCA1-206ENST00000531405 FAM47EQ6ZV65 393 aa17.05■□□□□ 0.32
SSSCA1-206ENST00000531405 TRILQ7L0X0 811 aa17.05■□□□□ 0.32
SSSCA1-206ENST00000531405 UBE3DQ7Z6J8 389 aa17.05■□□□□ 0.32
SSSCA1-206ENST00000531405 FAM109AQ8N4B1 249 aa17.05■□□□□ 0.32
SSSCA1-206ENST00000531405 TTYH2Q9BSA4 534 aa17.05■□□□□ 0.32
SSSCA1-206ENST00000531405 MCMBPQ9BTE3 642 aa17.05■□□□□ 0.32
SSSCA1-206ENST00000531405 CAPS2Q9BXY5 557 aa17.05■□□□□ 0.32
SSSCA1-206ENST00000531405 PITHD1Q9GZP4 211 aaPredicted RBP17.05■□□□□ 0.32
SSSCA1-206ENST00000531405 DERL2Q9GZP9 239 aa17.05■□□□□ 0.32
SSSCA1-206ENST00000531405 RHOJQ9H4E5 214 aa17.05■□□□□ 0.32
SSSCA1-206ENST00000531405 SEMA4BQ9NPR2 832 aaPredicted RBP17.05■□□□□ 0.32
SSSCA1-206ENST00000531405 MTO1Q9Y2Z2 717 aaKnown RBP17.05■□□□□ 0.32
SSSCA1-206ENST00000531405 VPS13CQ709C8 3753 aa17.05■□□□□ 0.32
SSSCA1-206ENST00000531405 MPDZO75970 2070 aa17.05■□□□□ 0.32
SSSCA1-206ENST00000531405 ATP6AP2A0A1C7CYW4 349 aa17.04■□□□□ 0.32
SSSCA1-206ENST00000531405 BCKDKO14874 412 aa17.04■□□□□ 0.32
SSSCA1-206ENST00000531405 PHGDHO43175 533 aaKnown RBP17.04■□□□□ 0.32
SSSCA1-206ENST00000531405 KLK8O60259 260 aa17.04■□□□□ 0.32
SSSCA1-206ENST00000531405 SH3BGRLO75368 114 aa17.04■□□□□ 0.32
SSSCA1-206ENST00000531405 ATP6AP2O75787 350 aa17.04■□□□□ 0.32
SSSCA1-206ENST00000531405 SEC31AO94979 1220 aaKnown RBP17.04■□□□□ 0.32
SSSCA1-206ENST00000531405 ETHE1O95571 254 aa17.04■□□□□ 0.32
SSSCA1-206ENST00000531405 GLI4P10075 376 aa17.04■□□□□ 0.32
SSSCA1-206ENST00000531405 HPDP32754 393 aaPredicted RBP17.04■□□□□ 0.32
SSSCA1-206ENST00000531405 GGT5P36269 586 aa17.04■□□□□ 0.32
SSSCA1-206ENST00000531405 OR4D1Q15615 310 aa17.04■□□□□ 0.32
SSSCA1-206ENST00000531405 NDUFAF5Q5TEU4 345 aa17.04■□□□□ 0.32
SSSCA1-206ENST00000531405 B3GNT6Q6ZMB0 384 aa17.04■□□□□ 0.32
SSSCA1-206ENST00000531405 GPSM1Q86YR5 675 aa17.04■□□□□ 0.32
SSSCA1-206ENST00000531405 LIX1LQ8IVB5 337 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms