RNA–Protein interactions for RNA: ENST00000531303.5

SMPD1-205, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 1,451 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-205ENST00000531303 ABHD18Q0P651 414 aa17.98■□□□□ 0.47
SMPD1-205ENST00000531303 HEPACAMQ14CZ8 416 aa17.98■□□□□ 0.47
SMPD1-205ENST00000531303 FAM180BQ6P0A1 224 aa17.98■□□□□ 0.47
SMPD1-205ENST00000531303 IKBIPQ70UQ0 350 aa17.98■□□□□ 0.47
SMPD1-205ENST00000531303 TICAM1Q8IUC6 712 aa17.98■□□□□ 0.47
SMPD1-205ENST00000531303 RIMKLAQ8IXN7 391 aa17.98■□□□□ 0.47
SMPD1-205ENST00000531303 CACTIN-AS1Q8N1I8 211 aa17.98■□□□□ 0.47
SMPD1-205ENST00000531303 ASPSCR1Q9BZE9 553 aa17.98■□□□□ 0.47
SMPD1-205ENST00000531303 REEP4Q9H6H4 257 aa17.98■□□□□ 0.47
SMPD1-205ENST00000531303 FAM234BA2RU67 622 aa17.97■□□□□ 0.47
SMPD1-205ENST00000531303 GABRR3A8MPY1 467 aa17.97■□□□□ 0.47
SMPD1-205ENST00000531303 C9orf172C9J069 976 aa17.97■□□□□ 0.47
SMPD1-205ENST00000531303 SCAMP2O15127 329 aaKnown RBP17.97■□□□□ 0.47
SMPD1-205ENST00000531303 PGRMC2O15173 223 aa17.97■□□□□ 0.47
SMPD1-205ENST00000531303 B4GALT2O60909 372 aa17.97■□□□□ 0.47
SMPD1-205ENST00000531303 CDC123O75794 336 aaPredicted RBP17.97■□□□□ 0.47
SMPD1-205ENST00000531303 FURINP09958 794 aa17.97■□□□□ 0.47
SMPD1-205ENST00000531303 TLX1P31314 330 aaPredicted RBP17.97■□□□□ 0.47
SMPD1-205ENST00000531303 XCR1P46094 333 aa17.97■□□□□ 0.47
SMPD1-205ENST00000531303 MRPL19P49406 292 aaKnown RBP17.97■□□□□ 0.47
SMPD1-205ENST00000531303 RAB38P57729 211 aa17.97■□□□□ 0.47
SMPD1-205ENST00000531303 GABREP78334 506 aa17.97■□□□□ 0.47
SMPD1-205ENST00000531303 IRX1P78414 480 aaPredicted RBP17.97■□□□□ 0.47
SMPD1-205ENST00000531303 DSG2Q14126 1118 aa17.97■□□□□ 0.47
SMPD1-205ENST00000531303 UGT8Q16880 541 aa17.97■□□□□ 0.47
SMPD1-205ENST00000531303 PRSS53Q2L4Q9 553 aa17.97■□□□□ 0.47
SMPD1-205ENST00000531303 FAM174BQ3ZCQ3 159 aa17.97■□□□□ 0.47
SMPD1-205ENST00000531303 NKAIN1Q4KMZ8 207 aa17.97■□□□□ 0.47
SMPD1-205ENST00000531303 SPANXN4Q5MJ08 99 aa17.97■□□□□ 0.47
SMPD1-205ENST00000531303 CPTPQ5TA50 214 aa17.97■□□□□ 0.47
SMPD1-205ENST00000531303 TMEM164Q5U3C3 297 aa17.97■□□□□ 0.47
SMPD1-205ENST00000531303 TMPRSS7Q7RTY8 843 aa17.97■□□□□ 0.47
SMPD1-205ENST00000531303 SNX32Q86XE0 403 aa17.97■□□□□ 0.47
SMPD1-205ENST00000531303 GALNT6Q8NCL4 622 aa17.97■□□□□ 0.47
SMPD1-205ENST00000531303 VPS33AQ96AX1 596 aa17.97■□□□□ 0.47
SMPD1-205ENST00000531303 EXOSC8Q96B26 276 aaKnown RBP17.97■□□□□ 0.47
SMPD1-205ENST00000531303 PPCDCQ96CD2 204 aa17.97■□□□□ 0.47
SMPD1-205ENST00000531303 DDA1Q9BW61 102 aa17.97■□□□□ 0.47
SMPD1-205ENST00000531303 CLMPQ9H6B4 373 aa17.97■□□□□ 0.47
SMPD1-205ENST00000531303 WDR41Q9HAD4 459 aa17.97■□□□□ 0.47
SMPD1-205ENST00000531303 ARL8BQ9NVJ2 186 aa17.97■□□□□ 0.47
SMPD1-205ENST00000531303 MS4A12Q9NXJ0 267 aa17.97■□□□□ 0.47
SMPD1-205ENST00000531303 FOXJ2Q9P0K8 574 aa17.97■□□□□ 0.47
SMPD1-205ENST00000531303 WBP11Q9Y2W2 641 aaKnown RBP17.97■□□□□ 0.47
SMPD1-205ENST00000531303 PCDHA9Q9Y5H5 950 aa17.97■□□□□ 0.47
SMPD1-205ENST00000531303 CAPN14A8MX76 684 aa17.96■□□□□ 0.47
SMPD1-205ENST00000531303 MEN1O00255 615 aa17.96■□□□□ 0.47
SMPD1-205ENST00000531303 PRMT3O60678 531 aa17.96■□□□□ 0.47
SMPD1-205ENST00000531303 JRKO75564 520 aa17.96■□□□□ 0.47
SMPD1-205ENST00000531303 LAMP1P11279 417 aa17.96■□□□□ 0.47
SMPD1-205ENST00000531303 PIM1P11309 404 aaPredicted RBP17.96■□□□□ 0.47
SMPD1-205ENST00000531303 DRD2P14416 443 aa17.96■□□□□ 0.47
SMPD1-205ENST00000531303 DDCP20711 480 aa17.96■□□□□ 0.47
SMPD1-205ENST00000531303 EFNA1P20827 205 aaPredicted RBP17.96■□□□□ 0.47
SMPD1-205ENST00000531303 ADSLP30566 484 aaPredicted RBP17.96■□□□□ 0.47
SMPD1-205ENST00000531303 S100A3P33764 101 aa17.96■□□□□ 0.47
SMPD1-205ENST00000531303 GSTM5P46439 218 aa17.96■□□□□ 0.47
SMPD1-205ENST00000531303 ZFP36L2P47974 494 aaKnown RBP17.96■□□□□ 0.47
SMPD1-205ENST00000531303 HNRNPFP52597 415 aaKnown RBP17.96■□□□□ 0.47
SMPD1-205ENST00000531303 KCNK10P57789 538 aa17.96■□□□□ 0.47
SMPD1-205ENST00000531303 DCDP81605 110 aaKnown RBP17.96■□□□□ 0.47
SMPD1-205ENST00000531303 ACTN3Q08043 901 aaPredicted RBP17.96■□□□□ 0.47
SMPD1-205ENST00000531303 VPS26BQ4G0F5 336 aa17.96■□□□□ 0.47
SMPD1-205ENST00000531303 TIGD2Q4W5G0 525 aa17.96■□□□□ 0.47
SMPD1-205ENST00000531303 LCN10Q6JVE6 187 aa17.96■□□□□ 0.47
SMPD1-205ENST00000531303 BLOC1S3Q6QNY0 202 aa17.96■□□□□ 0.47
SMPD1-205ENST00000531303 R3HCC1LQ7Z5L2 792 aaKnown RBP17.96■□□□□ 0.47
SMPD1-205ENST00000531303 PRSS58Q8IYP2 241 aa17.96■□□□□ 0.47
SMPD1-205ENST00000531303 TMEM52Q8NDY8 209 aa17.96■□□□□ 0.47
SMPD1-205ENST00000531303 MR1Q95460 341 aa17.96■□□□□ 0.47
SMPD1-205ENST00000531303 PRPF18Q99633 342 aaKnown RBP17.96■□□□□ 0.47
SMPD1-205ENST00000531303 ZPBPQ9BS86 351 aa17.96■□□□□ 0.47
SMPD1-205ENST00000531303 RPF2Q9H7B2 306 aaKnown RBP17.96■□□□□ 0.47
SMPD1-205ENST00000531303 AKIRIN1Q9H9L7 192 aaPredicted RBP17.96■□□□□ 0.47
SMPD1-205ENST00000531303 SLC22A11Q9NSA0 550 aa17.96■□□□□ 0.47
SMPD1-205ENST00000531303 MRGBPQ9NV56 204 aa17.96■□□□□ 0.47
SMPD1-205ENST00000531303 NUP214P35658 2090 aaPredicted RBP17.96■□□□□ 0.47
SMPD1-205ENST00000531303 MYOCOSA0A1B0GUC4 107 aa17.95■□□□□ 0.46
SMPD1-205ENST00000531303 C1orf226A1L170 272 aa17.95■□□□□ 0.46
SMPD1-205ENST00000531303 OR2W5A6NFC9 320 aa17.95■□□□□ 0.46
SMPD1-205ENST00000531303 CYR61O00622 381 aa17.95■□□□□ 0.46
SMPD1-205ENST00000531303 ERAL1O75616 437 aaKnown RBP17.95■□□□□ 0.46
SMPD1-205ENST00000531303 STK17BO94768 372 aa17.95■□□□□ 0.46
SMPD1-205ENST00000531303 AGXTP21549 392 aa17.95■□□□□ 0.46
SMPD1-205ENST00000531303 RORAP35398 523 aa17.95■□□□□ 0.46
SMPD1-205ENST00000531303 ID2Q02363 134 aa17.95■□□□□ 0.46
SMPD1-205ENST00000531303 ZNF385BQ569K4 471 aa17.95■□□□□ 0.46
SMPD1-205ENST00000531303 MFSD4BQ5TF39 518 aa17.95■□□□□ 0.46
SMPD1-205ENST00000531303 COX15Q7KZN9 410 aa17.95■□□□□ 0.46
SMPD1-205ENST00000531303 OR4N5Q8IXE1 308 aa17.95■□□□□ 0.46
SMPD1-205ENST00000531303 GLB1L3Q8NCI6 653 aaPredicted RBP17.95■□□□□ 0.46
SMPD1-205ENST00000531303 STARD8Q92502 1023 aa17.95■□□□□ 0.46
SMPD1-205ENST00000531303 SPDL1Q96EA4 605 aa17.95■□□□□ 0.46
SMPD1-205ENST00000531303 POLR1BQ9H9Y6 1135 aa17.95■□□□□ 0.46
SMPD1-205ENST00000531303 CLK4Q9HAZ1 481 aaKnown RBP17.95■□□□□ 0.46
SMPD1-205ENST00000531303 CTSFQ9UBX1 484 aa17.95■□□□□ 0.46
SMPD1-205ENST00000531303 ATP6V1HQ9UI12 483 aa17.95■□□□□ 0.46
SMPD1-205ENST00000531303 UTS2RQ9UKP6 389 aa17.95■□□□□ 0.46
SMPD1-205ENST00000531303 MAP4K5Q9Y4K4 846 aa17.95■□□□□ 0.46
SMPD1-205ENST00000531303 SDK2Q58EX2 2172 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms