RNA–Protein interactions for RNA: ENST00000530004.5

TTC39A-216, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 1 (best) BASIC

Gene TTC39A, Length 1,780 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-216ENST00000530004 KCNC2Q96PR1 638 aa13.66□□□□□ -0.22
TTC39A-216ENST00000530004 PANX1Q96RD7 426 aa13.66□□□□□ -0.22
TTC39A-216ENST00000530004 KCTD14Q9BQ13 255 aaPredicted RBP13.66□□□□□ -0.22
TTC39A-216ENST00000530004 ZFYVE21Q9BQ24 234 aa13.66□□□□□ -0.22
TTC39A-216ENST00000530004 ZNF768Q9H5H4 540 aaKnown RBP13.66□□□□□ -0.22
TTC39A-216ENST00000530004 MIEF1Q9NQG6 463 aa13.66□□□□□ -0.22
TTC39A-216ENST00000530004 ATAD3AQ9NVI7 634 aa13.66□□□□□ -0.22
TTC39A-216ENST00000530004 PILRAQ9UKJ1 303 aa13.66□□□□□ -0.22
TTC39A-216ENST00000530004 WBP11Q9Y2W2 641 aaKnown RBP13.66□□□□□ -0.22
TTC39A-216ENST00000530004 CEP250Q9BV73 2442 aa13.66□□□□□ -0.22
TTC39A-216ENST00000530004 A0A0A6YYD5 115 aa13.66□□□□□ -0.22
TTC39A-216ENST00000530004 FKBP6O75344 327 aa13.66□□□□□ -0.22
TTC39A-216ENST00000530004 CPSF4O95639 269 aaKnown RBP13.66□□□□□ -0.22
TTC39A-216ENST00000530004 HOXB9P17482 250 aaPredicted RBP13.66□□□□□ -0.22
TTC39A-216ENST00000530004 EFNA1P20827 205 aaPredicted RBP13.66□□□□□ -0.22
TTC39A-216ENST00000530004 PTPN6P29350 595 aa13.66□□□□□ -0.22
TTC39A-216ENST00000530004 TRPC1P48995 793 aa13.66□□□□□ -0.22
TTC39A-216ENST00000530004 SEPHS1P49903 392 aa13.66□□□□□ -0.22
TTC39A-216ENST00000530004 HNRNPFP52597 415 aaKnown RBP13.66□□□□□ -0.22
TTC39A-216ENST00000530004 CLDN6P56747 220 aa13.66□□□□□ -0.22
TTC39A-216ENST00000530004 RAB8AP61006 207 aa13.66□□□□□ -0.22
TTC39A-216ENST00000530004 RELAQ04206 551 aa13.66□□□□□ -0.22
TTC39A-216ENST00000530004 TRA2AQ13595 282 aaKnown RBP eCLIP13.66□□□□□ -0.22
TTC39A-216ENST00000530004 MUM1Q2TAK8 710 aa13.66□□□□□ -0.22
TTC39A-216ENST00000530004 RUNDC3AQ59EK9 446 aa13.66□□□□□ -0.22
TTC39A-216ENST00000530004 PHF19Q5T6S3 580 aa13.66□□□□□ -0.22
TTC39A-216ENST00000530004 KMT5CQ86Y97 462 aa13.66□□□□□ -0.22
TTC39A-216ENST00000530004 TICAM1Q8IUC6 712 aa13.66□□□□□ -0.22
TTC39A-216ENST00000530004 KCT2Q8NC54 265 aa13.66□□□□□ -0.22
TTC39A-216ENST00000530004 RCBTB1Q8NDN9 531 aa13.66□□□□□ -0.22
TTC39A-216ENST00000530004 SRFBP1Q8NEF9 429 aaKnown RBP13.66□□□□□ -0.22
TTC39A-216ENST00000530004 VPS37AQ8NEZ2 397 aa13.66□□□□□ -0.22
TTC39A-216ENST00000530004 OR8K5Q8NH50 307 aa13.66□□□□□ -0.22
TTC39A-216ENST00000530004 NT5CQ8TCD5 201 aa13.66□□□□□ -0.22
TTC39A-216ENST00000530004 PYDC1Q8WXC3 89 aa13.66□□□□□ -0.22
TTC39A-216ENST00000530004 TM4SF19Q96DZ7 209 aa13.66□□□□□ -0.22
TTC39A-216ENST00000530004 TCTN2Q96GX1 697 aa13.66□□□□□ -0.22
TTC39A-216ENST00000530004 SLC41A2Q96JW4 573 aa13.66□□□□□ -0.22
TTC39A-216ENST00000530004 CCDC115Q96NT0 180 aa13.66□□□□□ -0.22
TTC39A-216ENST00000530004 GBP5Q96PP8 586 aa13.66□□□□□ -0.22
TTC39A-216ENST00000530004 THUMPD3Q9BV44 507 aaKnown RBP13.66□□□□□ -0.22
TTC39A-216ENST00000530004 PRDM7Q9NQW5 492 aa13.66□□□□□ -0.22
TTC39A-216ENST00000530004 DLL3Q9NYJ7 618 aa13.66□□□□□ -0.22
TTC39A-216ENST00000530004 DCDC2BA2VCK2 349 aa13.65□□□□□ -0.22
TTC39A-216ENST00000530004 DNAJA2O60884 412 aa13.65□□□□□ -0.22
TTC39A-216ENST00000530004 MT-CO3P00414 261 aa13.65□□□□□ -0.22
TTC39A-216ENST00000530004 NELFEP18615 380 aaKnown RBP13.65□□□□□ -0.22
TTC39A-216ENST00000530004 DDCP20711 480 aa13.65□□□□□ -0.22
TTC39A-216ENST00000530004 HIST1H1TP22492 207 aaPredicted RBP13.65□□□□□ -0.22
TTC39A-216ENST00000530004 CCKBRP32239 447 aa13.65□□□□□ -0.22
TTC39A-216ENST00000530004 GSTM5P46439 218 aa13.65□□□□□ -0.22
TTC39A-216ENST00000530004 ARFIP1P53367 373 aa13.65□□□□□ -0.22
TTC39A-216ENST00000530004 HSD11B2P80365 405 aa13.65□□□□□ -0.22
TTC39A-216ENST00000530004 TGM3Q08188 693 aa13.65□□□□□ -0.22
TTC39A-216ENST00000530004 BNIP2Q12982 314 aa13.65□□□□□ -0.22
TTC39A-216ENST00000530004 HEPACAMQ14CZ8 416 aa13.65□□□□□ -0.22
TTC39A-216ENST00000530004 HES3Q5TGS1 186 aa13.65□□□□□ -0.22
TTC39A-216ENST00000530004 FRMPD2BQ6IN97 320 aa13.65□□□□□ -0.22
TTC39A-216ENST00000530004 AAGABQ6PD74 315 aa13.65□□□□□ -0.22
TTC39A-216ENST00000530004 RNF44Q7L0R7 432 aa13.65□□□□□ -0.22
TTC39A-216ENST00000530004 GAL3ST3Q96A11 431 aa13.65□□□□□ -0.22
TTC39A-216ENST00000530004 RERGQ96A58 199 aaPredicted RBP13.65□□□□□ -0.22
TTC39A-216ENST00000530004 AURKBQ96GD4 344 aaPredicted RBP13.65□□□□□ -0.22
TTC39A-216ENST00000530004 SH3GL1Q99961 368 aa13.65□□□□□ -0.22
TTC39A-216ENST00000530004 CPPED1Q9BRF8 314 aaPredicted RBP13.65□□□□□ -0.22
TTC39A-216ENST00000530004 TBCDQ9BTW9 1192 aa13.65□□□□□ -0.22
TTC39A-216ENST00000530004 CHRNA10Q9GZZ6 450 aa13.65□□□□□ -0.22
TTC39A-216ENST00000530004 IKZF5Q9H5V7 419 aa13.65□□□□□ -0.22
TTC39A-216ENST00000530004 PIF1Q9H611 641 aa13.65□□□□□ -0.22
TTC39A-216ENST00000530004 S100A14Q9HCY8 104 aa13.65□□□□□ -0.22
TTC39A-216ENST00000530004 FAM60AQ9NP50 221 aa13.65□□□□□ -0.22
TTC39A-216ENST00000530004 SOHLH2Q9NX45 425 aa13.65□□□□□ -0.22
TTC39A-216ENST00000530004 EGFL7Q9UHF1 273 aa13.65□□□□□ -0.22
TTC39A-216ENST00000530004 BTNL2Q9UIR0 455 aa13.65□□□□□ -0.22
TTC39A-216ENST00000530004 LOC105369274A0A096LPK9 316 aa13.64□□□□□ -0.23
TTC39A-216ENST00000530004 LOC102723532A0A0G2JNH3 316 aa13.64□□□□□ -0.23
TTC39A-216ENST00000530004 RNASET2O00584 256 aaKnown RBP13.64□□□□□ -0.23
TTC39A-216ENST00000530004 NVLO15381 856 aaKnown RBP13.64□□□□□ -0.23
TTC39A-216ENST00000530004 P2RX6O15547 441 aa13.64□□□□□ -0.23
TTC39A-216ENST00000530004 STAMBPO95630 424 aa13.64□□□□□ -0.23
TTC39A-216ENST00000530004 FAM58BPP0C7Q3 252 aa13.64□□□□□ -0.23
TTC39A-216ENST00000530004 ATP5A1P25705 553 aaKnown RBP13.64□□□□□ -0.23
TTC39A-216ENST00000530004 TSFMP43897 325 aaKnown RBP13.64□□□□□ -0.23
TTC39A-216ENST00000530004 ALDH9A1P49189 494 aa13.64□□□□□ -0.23
TTC39A-216ENST00000530004 TRA2BP62995 288 aaKnown RBP13.64□□□□□ -0.23
TTC39A-216ENST00000530004 AP2B1P63010 937 aa13.64□□□□□ -0.23
TTC39A-216ENST00000530004 SLAMF1Q13291 335 aa13.64□□□□□ -0.23
TTC39A-216ENST00000530004 SLC9A5Q14940 896 aa13.64□□□□□ -0.23
TTC39A-216ENST00000530004 PRSS53Q2L4Q9 553 aa13.64□□□□□ -0.23
TTC39A-216ENST00000530004 ISXQ2M1V0 245 aa13.64□□□□□ -0.23
TTC39A-216ENST00000530004 MPEG1Q2M385 716 aa13.64□□□□□ -0.23
TTC39A-216ENST00000530004 DGLUCYQ7Z3D6 616 aa13.64□□□□□ -0.23
TTC39A-216ENST00000530004 SPATA24Q86W54 205 aa13.64□□□□□ -0.23
TTC39A-216ENST00000530004 DHFR2Q86XF0 187 aa13.64□□□□□ -0.23
TTC39A-216ENST00000530004 OR4N4Q8N0Y3 316 aa13.64□□□□□ -0.23
TTC39A-216ENST00000530004 D2HGDHQ8N465 521 aa13.64□□□□□ -0.23
TTC39A-216ENST00000530004 ACOT4Q8N9L9 421 aa13.64□□□□□ -0.23
TTC39A-216ENST00000530004 CAMKVQ8NCB2 501 aa13.64□□□□□ -0.23
TTC39A-216ENST00000530004 CIDECQ96AQ7 238 aaPredicted RBP13.64□□□□□ -0.23
TTC39A-216ENST00000530004 ECSITQ9BQ95 431 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms