RNA–Protein interactions for RNA: ENST00000529661.1

C11orf88-204, Transcript of chromosome 11 open reading frame 88, humanhuman

TSL 3

Gene C11orf88, Length 624 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-204ENST00000529661 SNRPD1P62314 119 aaKnown RBP3.91□□□□□ -1.78
C11orf88-204ENST00000529661 SPANXN4Q5MJ08 99 aa3.91□□□□□ -1.78
C11orf88-204ENST00000529661 LYPLAL1Q5VWZ2 237 aa3.91□□□□□ -1.78
C11orf88-204ENST00000529661 PRAMEF7Q5VXH5 474 aa3.91□□□□□ -1.78
C11orf88-204ENST00000529661 ABRAXAS1Q6UWZ7 409 aa3.91□□□□□ -1.78
C11orf88-204ENST00000529661 MYPOPQ86VE0 399 aaPredicted RBP3.91□□□□□ -1.78
C11orf88-204ENST00000529661 SMPDL3AQ92484 453 aa3.91□□□□□ -1.78
C11orf88-204ENST00000529661 MRPL38Q96DV4 380 aaKnown RBP3.91□□□□□ -1.78
C11orf88-204ENST00000529661 ZNF486Q96H40 463 aaPredicted RBP3.91□□□□□ -1.78
C11orf88-204ENST00000529661 MAGED4Q96JG8 741 aa3.91□□□□□ -1.78
C11orf88-204ENST00000529661 GPR137Q96N19 417 aa3.91□□□□□ -1.78
C11orf88-204ENST00000529661 ERGIC2Q96RQ1 377 aa3.91□□□□□ -1.78
C11orf88-204ENST00000529661 S1PR3Q99500 378 aa3.91□□□□□ -1.78
C11orf88-204ENST00000529661 UBAC1Q9BSL1 405 aa3.91□□□□□ -1.78
C11orf88-204ENST00000529661 HOXD1Q9GZZ0 328 aa3.91□□□□□ -1.78
C11orf88-204ENST00000529661 TRPV6Q9H1D0 765 aa3.91□□□□□ -1.78
C11orf88-204ENST00000529661 GANQ9H2C0 597 aa3.91□□□□□ -1.78
C11orf88-204ENST00000529661 DDX28Q9NUL7 540 aaKnown RBP3.91□□□□□ -1.78
C11orf88-204ENST00000529661 ZNF319Q9P2F9 582 aa3.91□□□□□ -1.78
C11orf88-204ENST00000529661 HOOK1Q9UJC3 728 aaKnown RBP3.91□□□□□ -1.78
C11orf88-204ENST00000529661 ANGPTL3Q9Y5C1 460 aa3.91□□□□□ -1.78
C11orf88-204ENST00000529661 RNF123Q5XPI4 1314 aa3.91□□□□□ -1.78
C11orf88-204ENST00000529661 MEIOCA2RUB1 952 aa3.9□□□□□ -1.79
C11orf88-204ENST00000529661 CCDC69A6NI79 296 aa3.9□□□□□ -1.79
C11orf88-204ENST00000529661 ECE2O60344 883 aa3.9□□□□□ -1.79
C11orf88-204ENST00000529661 NME2P1O60361 137 aa3.9□□□□□ -1.79
C11orf88-204ENST00000529661 HSF2BPO75031 334 aa3.9□□□□□ -1.79
C11orf88-204ENST00000529661 LRCH4O75427 683 aa3.9□□□□□ -1.79
C11orf88-204ENST00000529661 GMNNO75496 209 aa3.9□□□□□ -1.79
C11orf88-204ENST00000529661 FGF19O95750 216 aa3.9□□□□□ -1.79
C11orf88-204ENST00000529661 TXNDC12O95881 172 aa3.9□□□□□ -1.79
C11orf88-204ENST00000529661 CXCL10P02778 98 aa3.9□□□□□ -1.79
C11orf88-204ENST00000529661 CT45A8P0DMV1 189 aa3.9□□□□□ -1.79
C11orf88-204ENST00000529661 CT45A9P0DMV2 189 aa3.9□□□□□ -1.79
C11orf88-204ENST00000529661 CCDC192P0DO97 292 aa3.9□□□□□ -1.79
C11orf88-204ENST00000529661 HPDP32754 393 aaPredicted RBP3.9□□□□□ -1.79
C11orf88-204ENST00000529661 KRTAP10-12P60413 245 aa3.9□□□□□ -1.79
C11orf88-204ENST00000529661 CCZ1BP86790 482 aa3.9□□□□□ -1.79
C11orf88-204ENST00000529661 CCZ1P86791 482 aaPredicted RBP3.9□□□□□ -1.79
C11orf88-204ENST00000529661 GUCY2DQ02846 1103 aa3.9□□□□□ -1.79
C11orf88-204ENST00000529661 PPP1R8Q12972 351 aaKnown RBP3.9□□□□□ -1.79
C11orf88-204ENST00000529661 MEF2DQ14814 521 aa3.9□□□□□ -1.79
C11orf88-204ENST00000529661 C3AR1Q16581 482 aa3.9□□□□□ -1.79
C11orf88-204ENST00000529661 CT45A2Q5DJT8 189 aa3.9□□□□□ -1.79
C11orf88-204ENST00000529661 ADAMTSL4-AS1Q5T5F5 129 aa3.9□□□□□ -1.79
C11orf88-204ENST00000529661 CAPN13Q6MZZ7 669 aaPredicted RBP3.9□□□□□ -1.79
C11orf88-204ENST00000529661 BHLHB9Q6PI77 547 aa3.9□□□□□ -1.79
C11orf88-204ENST00000529661 TMEM64Q6YI46 380 aa3.9□□□□□ -1.79
C11orf88-204ENST00000529661 Q6ZVQ6 151 aa3.9□□□□□ -1.79
C11orf88-204ENST00000529661 CACUL1Q86Y37 369 aa3.9□□□□□ -1.79
C11orf88-204ENST00000529661 DND1Q8IYX4 353 aaKnown RBP3.9□□□□□ -1.79
C11orf88-204ENST00000529661 ELMOD1Q8N336 334 aa3.9□□□□□ -1.79
C11orf88-204ENST00000529661 RAB42Q8N4Z0 105 aa3.9□□□□□ -1.79
C11orf88-204ENST00000529661 OR6S1Q8NH40 331 aa3.9□□□□□ -1.79
C11orf88-204ENST00000529661 OR4L1Q8NH43 312 aa3.9□□□□□ -1.79
C11orf88-204ENST00000529661 C8orf46Q8TAG6 207 aa3.9□□□□□ -1.79
C11orf88-204ENST00000529661 TAF15Q92804 592 aaKnown RBP eCLIP3.9□□□□□ -1.79
C11orf88-204ENST00000529661 GLYATL1Q969I3 302 aa3.9□□□□□ -1.79
C11orf88-204ENST00000529661 ESAMQ96AP7 390 aa3.9□□□□□ -1.79
C11orf88-204ENST00000529661 FAM111AQ96PZ2 611 aa3.9□□□□□ -1.79
C11orf88-204ENST00000529661 SPAG8Q99932 426 aaPredicted RBP3.9□□□□□ -1.79
C11orf88-204ENST00000529661 DDX47Q9H0S4 455 aaKnown RBP3.9□□□□□ -1.79
C11orf88-204ENST00000529661 MTHFD2LQ9H903 347 aaPredicted RBP3.9□□□□□ -1.79
C11orf88-204ENST00000529661 GPN1Q9HCN4 374 aaPredicted RBP3.9□□□□□ -1.79
C11orf88-204ENST00000529661 ACOXLQ9NUZ1 547 aa3.9□□□□□ -1.79
C11orf88-204ENST00000529661 ATAD3AQ9NVI7 634 aa3.9□□□□□ -1.79
C11orf88-204ENST00000529661 PLEK2Q9NYT0 353 aa3.9□□□□□ -1.79
C11orf88-204ENST00000529661 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP3.9□□□□□ -1.79
C11orf88-204ENST00000529661 TMEM181Q9P2C4 612 aa3.9□□□□□ -1.79
C11orf88-204ENST00000529661 SPASTQ9UBP0 616 aa3.9□□□□□ -1.79
C11orf88-204ENST00000529661 MTF2Q9Y483 593 aaPredicted RBP3.9□□□□□ -1.79
C11orf88-204ENST00000529661 ATP6V0A2Q9Y487 856 aa3.9□□□□□ -1.79
C11orf88-204ENST00000529661 UBE4BO95155 1302 aa3.9□□□□□ -1.79
C11orf88-204ENST00000529661 CFAP73A6NFT4 308 aa3.89□□□□□ -1.79
C11orf88-204ENST00000529661 ERI2A8K979 691 aaKnown RBP3.89□□□□□ -1.79
C11orf88-204ENST00000529661 CCSO14618 274 aa3.89□□□□□ -1.79
C11orf88-204ENST00000529661 CHEK1O14757 476 aa3.89□□□□□ -1.79
C11orf88-204ENST00000529661 SURF4O15260 269 aa3.89□□□□□ -1.79
C11orf88-204ENST00000529661 OGTO15294 1046 aa3.89□□□□□ -1.79
C11orf88-204ENST00000529661 ARHGEF9O43307 516 aa3.89□□□□□ -1.79
C11orf88-204ENST00000529661 TLX2O43763 284 aaPredicted RBP3.89□□□□□ -1.79
C11orf88-204ENST00000529661 ATP6V1G1O75348 118 aa3.89□□□□□ -1.79
C11orf88-204ENST00000529661 STAM2O75886 525 aa3.89□□□□□ -1.79
C11orf88-204ENST00000529661 ZFAND5O76080 213 aa3.89□□□□□ -1.79
C11orf88-204ENST00000529661 OR6B1O95007 311 aa3.89□□□□□ -1.79
C11orf88-204ENST00000529661 SFTPBP07988 381 aa3.89□□□□□ -1.79
C11orf88-204ENST00000529661 C4BPBP20851 252 aa3.89□□□□□ -1.79
C11orf88-204ENST00000529661 GIFP27352 417 aa3.89□□□□□ -1.79
C11orf88-204ENST00000529661 SFNP31947 248 aa3.89□□□□□ -1.79
C11orf88-204ENST00000529661 RABIFP47224 123 aa3.89□□□□□ -1.79
C11orf88-204ENST00000529661 BACE1P56817 501 aa3.89□□□□□ -1.79
C11orf88-204ENST00000529661 EVCP57679 992 aa3.89□□□□□ -1.79
C11orf88-204ENST00000529661 HERV-K104P63124 156 aa3.89□□□□□ -1.79
C11orf88-204ENST00000529661 HNRNPDQ14103 355 aaKnown RBP3.89□□□□□ -1.79
C11orf88-204ENST00000529661 MTF1Q14872 753 aa3.89□□□□□ -1.79
C11orf88-204ENST00000529661 CCDC40Q4G0X9 1142 aa3.89□□□□□ -1.79
C11orf88-204ENST00000529661 OR6B2Q6IFH4 312 aa3.89□□□□□ -1.79
C11orf88-204ENST00000529661 PWWP2BQ6NUJ5 590 aa3.89□□□□□ -1.79
C11orf88-204ENST00000529661 FIP1L1Q6UN15 594 aaKnown RBP3.89□□□□□ -1.79
C11orf88-204ENST00000529661 Q6ZRP5 223 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 102.8 ms