RNA–Protein interactions for RNA: ENST00000528362.1

PSMC3-205, Transcript of proteasome 26S subunit, ATPase 3, human

TSL 2

Gene PSMC3, Length 546 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMC3-205	ENST00000528362	LGSN	Q5TDP6	509 aa		10.98	□□□□□ -0.65
PSMC3-205	ENST00000528362	ZNF468	Q5VIY5	522 aa	Predicted RBP	10.98	□□□□□ -0.65
PSMC3-205	ENST00000528362	RPS19BP1	Q86WX3	136 aa	Known RBP	10.98	□□□□□ -0.65
PSMC3-205	ENST00000528362	ARMC10	Q8N2F6	343 aa		10.98	□□□□□ -0.65
PSMC3-205	ENST00000528362	ST6GALNAC3	Q8NDV1	305 aa		10.98	□□□□□ -0.65
PSMC3-205	ENST00000528362	B3GNT7	Q8NFL0	401 aa		10.98	□□□□□ -0.65
PSMC3-205	ENST00000528362	PRR7	Q8TB68	274 aa		10.98	□□□□□ -0.65
PSMC3-205	ENST00000528362	ZNF483	Q8TF39	744 aa	Predicted RBP	10.98	□□□□□ -0.65
PSMC3-205	ENST00000528362	MZB1	Q8WU39	189 aa		10.98	□□□□□ -0.65
PSMC3-205	ENST00000528362	RGMA	Q96B86	450 aa		10.98	□□□□□ -0.65
PSMC3-205	ENST00000528362	REPS1	Q96D71	796 aa		10.98	□□□□□ -0.65
PSMC3-205	ENST00000528362	UTP23	Q9BRU9	249 aa	Known RBP	10.98	□□□□□ -0.65
PSMC3-205	ENST00000528362	CENPK	Q9BS16	269 aa		10.98	□□□□□ -0.65
PSMC3-205	ENST00000528362	NTMT1	Q9BV86	223 aa		10.98	□□□□□ -0.65
PSMC3-205	ENST00000528362	HES7	Q9BYE0	225 aa		10.98	□□□□□ -0.65
PSMC3-205	ENST00000528362	CDCP1	Q9H5V8	836 aa		10.98	□□□□□ -0.65
PSMC3-205	ENST00000528362	ADAP2	Q9NPF8	381 aa		10.98	□□□□□ -0.65
PSMC3-205	ENST00000528362	OLAH	Q9NV23	265 aa		10.98	□□□□□ -0.65
PSMC3-205	ENST00000528362	TMEM216	Q9P0N5	145 aa		10.98	□□□□□ -0.65
PSMC3-205	ENST00000528362	ABI3	Q9P2A4	366 aa		10.98	□□□□□ -0.65
PSMC3-205	ENST00000528362	PSMC3IP	Q9P2W1	217 aa	Predicted RBP	10.98	□□□□□ -0.65
PSMC3-205	ENST00000528362	SCN3A	Q9NY46	2000 aa		10.97	□□□□□ -0.65
PSMC3-205	ENST00000528362		A0A0A6YYD5	115 aa		10.97	□□□□□ -0.65
PSMC3-205	ENST00000528362	IQANK1	A0A1B0GTG1	560 aa		10.97	□□□□□ -0.65
PSMC3-205	ENST00000528362	FOXE1	O00358	373 aa	Predicted RBP	10.97	□□□□□ -0.65
PSMC3-205	ENST00000528362	PPP6C	O00743	305 aa		10.97	□□□□□ -0.65
PSMC3-205	ENST00000528362	TMPRSS11D	O60235	418 aa		10.97	□□□□□ -0.65
PSMC3-205	ENST00000528362	LDB3	O75112	727 aa		10.97	□□□□□ -0.65
PSMC3-205	ENST00000528362	EED	O75530	441 aa	Known RBP	10.97	□□□□□ -0.65
PSMC3-205	ENST00000528362	NEURL1	O76050	574 aa		10.97	□□□□□ -0.65
PSMC3-205	ENST00000528362	SHBG	P04278	402 aa		10.97	□□□□□ -0.65
PSMC3-205	ENST00000528362	EDN3	P14138	238 aa		10.97	□□□□□ -0.65
PSMC3-205	ENST00000528362	PTX3	P26022	381 aa	Predicted RBP	10.97	□□□□□ -0.65
PSMC3-205	ENST00000528362	TNFRSF8	P28908	595 aa		10.97	□□□□□ -0.65
PSMC3-205	ENST00000528362	TPP2	P29144	1249 aa	Predicted RBP	10.97	□□□□□ -0.65
PSMC3-205	ENST00000528362	ARL1	P40616	181 aa	Predicted RBP	10.97	□□□□□ -0.65
PSMC3-205	ENST00000528362	TDGF1P3	P51864	188 aa		10.97	□□□□□ -0.65
PSMC3-205	ENST00000528362	CCNG1	P51959	295 aa		10.97	□□□□□ -0.65
PSMC3-205	ENST00000528362	CDH13	P55290	713 aa		10.97	□□□□□ -0.65
PSMC3-205	ENST00000528362	HNRNPH2	P55795	449 aa	Known RBP	10.97	□□□□□ -0.65
PSMC3-205	ENST00000528362	MLF1	P58340	268 aa		10.97	□□□□□ -0.65
PSMC3-205	ENST00000528362	PHEX	P78562	749 aa		10.97	□□□□□ -0.65
PSMC3-205	ENST00000528362	ID2	Q02363	134 aa		10.97	□□□□□ -0.65
PSMC3-205	ENST00000528362	SLAMF1	Q13291	335 aa		10.97	□□□□□ -0.65
PSMC3-205	ENST00000528362	CUL3	Q13618	768 aa		10.97	□□□□□ -0.65
PSMC3-205	ENST00000528362	ELAVL1	Q15717	326 aa	Known RBP	10.97	□□□□□ -0.65
PSMC3-205	ENST00000528362	ZNF766	Q5HY98	468 aa		10.97	□□□□□ -0.65
PSMC3-205	ENST00000528362	FAM219B	Q5XKK7	198 aa		10.97	□□□□□ -0.65
PSMC3-205	ENST00000528362	FRG2	Q64ET8	278 aa		10.97	□□□□□ -0.65
PSMC3-205	ENST00000528362	LETMD1	Q6P1Q0	360 aa		10.97	□□□□□ -0.65
PSMC3-205	ENST00000528362	ZCCHC7	Q8N3Z6	543 aa	Known RBP	10.97	□□□□□ -0.65
PSMC3-205	ENST00000528362	SUN3	Q8TAQ9	357 aa		10.97	□□□□□ -0.65
PSMC3-205	ENST00000528362	PTPMT1	Q8WUK0	201 aa	Predicted RBP	10.97	□□□□□ -0.65
PSMC3-205	ENST00000528362	NR4A3	Q92570	626 aa		10.97	□□□□□ -0.65
PSMC3-205	ENST00000528362	NCLN	Q969V3	563 aa		10.97	□□□□□ -0.65
PSMC3-205	ENST00000528362	ATP6V1E2	Q96A05	226 aa		10.97	□□□□□ -0.65
PSMC3-205	ENST00000528362	ANKRD9	Q96BM1	317 aa	Predicted RBP	10.97	□□□□□ -0.65
PSMC3-205	ENST00000528362	SCMH1	Q96GD3	660 aa		10.97	□□□□□ -0.65
PSMC3-205	ENST00000528362	FRG2B	Q96QU4	278 aa		10.97	□□□□□ -0.65
PSMC3-205	ENST00000528362	C1QTNF3	Q9BXJ4	246 aa		10.97	□□□□□ -0.65
PSMC3-205	ENST00000528362	ALOXE3	Q9BYJ1	711 aa		10.97	□□□□□ -0.65
PSMC3-205	ENST00000528362	SEMA4B	Q9NPR2	832 aa	Predicted RBP	10.97	□□□□□ -0.65
PSMC3-205	ENST00000528362	FBXW2	Q9UKT8	454 aa		10.97	□□□□□ -0.65
PSMC3-205	ENST00000528362	PPT2	Q9UMR5	302 aa		10.97	□□□□□ -0.65
PSMC3-205	ENST00000528362	ATG4B	Q9Y4P1	393 aa		10.97	□□□□□ -0.65
PSMC3-205	ENST00000528362	DOCK10	Q96BY6	2186 aa		10.97	□□□□□ -0.65
PSMC3-205	ENST00000528362	USP9Y	O00507	2555 aa	Predicted RBP	10.97	□□□□□ -0.65
PSMC3-205	ENST00000528362	BLACE	A4D250	179 aa		10.96	□□□□□ -0.65
PSMC3-205	ENST00000528362	SYNDIG1L	A6NDD5	238 aa		10.96	□□□□□ -0.65
PSMC3-205	ENST00000528362	GOLGA8R	I6L899	631 aa		10.96	□□□□□ -0.65
PSMC3-205	ENST00000528362	FGF17	O60258	216 aa		10.96	□□□□□ -0.65
PSMC3-205	ENST00000528362	PRKN	O60260	465 aa	Predicted RBP	10.96	□□□□□ -0.65
PSMC3-205	ENST00000528362	DLX3	O60479	287 aa		10.96	□□□□□ -0.65
PSMC3-205	ENST00000528362	PRKRA	O75569	313 aa	Known RBP	10.96	□□□□□ -0.65
PSMC3-205	ENST00000528362	RASAL1	O95294	804 aa		10.96	□□□□□ -0.65
PSMC3-205	ENST00000528362	IFNA16	P05015	189 aa		10.96	□□□□□ -0.65
PSMC3-205	ENST00000528362	PYGB	P11216	843 aa		10.96	□□□□□ -0.65
PSMC3-205	ENST00000528362	TSPAN8	P19075	237 aa		10.96	□□□□□ -0.65
PSMC3-205	ENST00000528362	CPN2	P22792	545 aa		10.96	□□□□□ -0.65
PSMC3-205	ENST00000528362	MST1	P26927	711 aa		10.96	□□□□□ -0.65
PSMC3-205	ENST00000528362	TRHR	P34981	398 aa	Predicted RBP	10.96	□□□□□ -0.65
PSMC3-205	ENST00000528362	BSG	P35613	385 aa		10.96	□□□□□ -0.65
PSMC3-205	ENST00000528362	CLCN2	P51788	898 aa		10.96	□□□□□ -0.65
PSMC3-205	ENST00000528362	ARFIP1	P53367	373 aa		10.96	□□□□□ -0.65
PSMC3-205	ENST00000528362	IGLV3-21	P80748	117 aa	Predicted RBP	10.96	□□□□□ -0.65
PSMC3-205	ENST00000528362	PMP22	Q01453	160 aa		10.96	□□□□□ -0.65
PSMC3-205	ENST00000528362	TNFRSF17	Q02223	184 aa		10.96	□□□□□ -0.65
PSMC3-205	ENST00000528362	OC90	Q02509	493 aa	Predicted RBP	10.96	□□□□□ -0.65
PSMC3-205	ENST00000528362	SRSF11	Q05519	484 aa	Known RBP	10.96	□□□□□ -0.65
PSMC3-205	ENST00000528362	STX4	Q12846	297 aa		10.96	□□□□□ -0.65
PSMC3-205	ENST00000528362	ELOA	Q14241	798 aa	Known RBP	10.96	□□□□□ -0.65
PSMC3-205	ENST00000528362	GGTA1P	Q4G0N0	100 aa		10.96	□□□□□ -0.65
PSMC3-205	ENST00000528362	SPINK14	Q6IE38	97 aa		10.96	□□□□□ -0.65
PSMC3-205	ENST00000528362	MRM1	Q6IN84	353 aa	Known RBP	10.96	□□□□□ -0.65
PSMC3-205	ENST00000528362	GPR180	Q86V85	440 aa		10.96	□□□□□ -0.65
PSMC3-205	ENST00000528362	LCA5	Q86VQ0	697 aa		10.96	□□□□□ -0.65
PSMC3-205	ENST00000528362	ZNF227	Q86WZ6	799 aa		10.96	□□□□□ -0.65
PSMC3-205	ENST00000528362	TMEM132C	Q8N3T6	1108 aa		10.96	□□□□□ -0.65
PSMC3-205	ENST00000528362	OR4F6	Q8NGB9	312 aa		10.96	□□□□□ -0.65
PSMC3-205	ENST00000528362	ACMSD	Q8TDX5	336 aa		10.96	□□□□□ -0.65

Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms