RNA–Protein interactions for RNA: ENST00000527887.1

CAPN1-212, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 348 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-212ENST00000527887 A8MUA0 341 aa13.24□□□□□ -0.29
CAPN1-212ENST00000527887 PRSS44E7EML9 344 aa13.24□□□□□ -0.29
CAPN1-212ENST00000527887 NPIPA5E9PKD4 350 aa13.24□□□□□ -0.29
CAPN1-212ENST00000527887 K7EPI3 171 aa13.24□□□□□ -0.29
CAPN1-212ENST00000527887 PRAMEF4O60810 478 aa13.24□□□□□ -0.29
CAPN1-212ENST00000527887 KERAO60938 352 aa13.24□□□□□ -0.29
CAPN1-212ENST00000527887 SLC35E2BP0CK96 405 aa13.24□□□□□ -0.29
CAPN1-212ENST00000527887 ESRRAP11474 423 aaPredicted RBP13.24□□□□□ -0.29
CAPN1-212ENST00000527887 ZNF24P17028 368 aa13.24□□□□□ -0.29
CAPN1-212ENST00000527887 GPR143P51810 404 aa13.24□□□□□ -0.29
CAPN1-212ENST00000527887 ARFIP1P53367 373 aa13.24□□□□□ -0.29
CAPN1-212ENST00000527887 LIM2P55344 173 aa13.24□□□□□ -0.29
CAPN1-212ENST00000527887 SRSF11Q05519 484 aaKnown RBP13.24□□□□□ -0.29
CAPN1-212ENST00000527887 CHIT1Q13231 466 aa13.24□□□□□ -0.29
CAPN1-212ENST00000527887 ZNF468Q5VIY5 522 aaPredicted RBP13.24□□□□□ -0.29
CAPN1-212ENST00000527887 PRAMEF9Q5VWM5 478 aa13.24□□□□□ -0.29
CAPN1-212ENST00000527887 CHSY3Q70JA7 882 aa13.24□□□□□ -0.29
CAPN1-212ENST00000527887 MRGPRGQ86SM5 289 aa13.24□□□□□ -0.29
CAPN1-212ENST00000527887 CCDC25Q86WR0 208 aa13.24□□□□□ -0.29
CAPN1-212ENST00000527887 LAS2Q8IYD9 372 aa13.24□□□□□ -0.29
CAPN1-212ENST00000527887 CNPY4Q8N129 248 aa13.24□□□□□ -0.29
CAPN1-212ENST00000527887 TMEM156Q8N614 296 aa13.24□□□□□ -0.29
CAPN1-212ENST00000527887 MORN4Q8NDC4 146 aa13.24□□□□□ -0.29
CAPN1-212ENST00000527887 FBF1Q8TES7 1133 aa13.24□□□□□ -0.29
CAPN1-212ENST00000527887 UBTD2Q8WUN7 234 aa13.24□□□□□ -0.29
CAPN1-212ENST00000527887 ALG9Q9H6U8 611 aa13.24□□□□□ -0.29
CAPN1-212ENST00000527887 MED4Q9NPJ6 270 aa13.24□□□□□ -0.29
CAPN1-212ENST00000527887 PNO1Q9NRX1 252 aaKnown RBP13.24□□□□□ -0.29
CAPN1-212ENST00000527887 RYDENQ9NUL5 291 aaKnown RBP13.24□□□□□ -0.29
CAPN1-212ENST00000527887 VTI1BQ9UEU0 232 aa13.24□□□□□ -0.29
CAPN1-212ENST00000527887 FBXW2Q9UKT8 454 aa13.24□□□□□ -0.29
CAPN1-212ENST00000527887 NPIPA1Q9UND3 350 aa13.24□□□□□ -0.29
CAPN1-212ENST00000527887 CLDN16Q9Y5I7 305 aa13.24□□□□□ -0.29
CAPN1-212ENST00000527887 CLCA3PQ9Y6N3 262 aa13.24□□□□□ -0.29
CAPN1-212ENST00000527887 DIDO1Q9BTC0 2240 aaKnown RBP13.24□□□□□ -0.29
CAPN1-212ENST00000527887 ZGRF1Q86YA3 2104 aa13.24□□□□□ -0.29
CAPN1-212ENST00000527887 A0A087X1B8 175 aa13.23□□□□□ -0.29
CAPN1-212ENST00000527887 A0A0G2JN53 185 aa13.23□□□□□ -0.29
CAPN1-212ENST00000527887 SCELO95171 688 aa13.23□□□□□ -0.29
CAPN1-212ENST00000527887 NUDT17P0C025 328 aa13.23□□□□□ -0.29
CAPN1-212ENST00000527887 EPORP19235 508 aa13.23□□□□□ -0.29
CAPN1-212ENST00000527887 CD22P20273 847 aa13.23□□□□□ -0.29
CAPN1-212ENST00000527887 STX4Q12846 297 aa13.23□□□□□ -0.29
CAPN1-212ENST00000527887 FAM83EQ2M2I3 478 aa13.23□□□□□ -0.29
CAPN1-212ENST00000527887 METTL2BQ6P1Q9 378 aaKnown RBP13.23□□□□□ -0.29
CAPN1-212ENST00000527887 MED27Q6P2C8 311 aa13.23□□□□□ -0.29
CAPN1-212ENST00000527887 ZNF227Q86WZ6 799 aa13.23□□□□□ -0.29
CAPN1-212ENST00000527887 LURAP1LQ8IV03 231 aa13.23□□□□□ -0.29
CAPN1-212ENST00000527887 GSPT2Q8IYD1 628 aaKnown RBP13.23□□□□□ -0.29
CAPN1-212ENST00000527887 OR8K3Q8NH51 312 aa13.23□□□□□ -0.29
CAPN1-212ENST00000527887 OR14A16Q8NHC5 309 aa13.23□□□□□ -0.29
CAPN1-212ENST00000527887 C16orf52Q8NHV5 167 aa13.23□□□□□ -0.29
CAPN1-212ENST00000527887 ZNF473Q8WTR7 871 aaKnown RBP13.23□□□□□ -0.29
CAPN1-212ENST00000527887 NCLNQ969V3 563 aa13.23□□□□□ -0.29
CAPN1-212ENST00000527887 ESAMQ96AP7 390 aa13.23□□□□□ -0.29
CAPN1-212ENST00000527887 CMTM7Q96FZ5 175 aa13.23□□□□□ -0.29
CAPN1-212ENST00000527887 F2RL3Q96RI0 385 aa13.23□□□□□ -0.29
CAPN1-212ENST00000527887 ATOH8Q96SQ7 321 aa13.23□□□□□ -0.29
CAPN1-212ENST00000527887 CENPKQ9BS16 269 aa13.23□□□□□ -0.29
CAPN1-212ENST00000527887 MS4A8Q9BY19 250 aa13.23□□□□□ -0.29
CAPN1-212ENST00000527887 MS4A12Q9NXJ0 267 aa13.23□□□□□ -0.29
CAPN1-212ENST00000527887 KCMF1Q9P0J7 381 aa13.23□□□□□ -0.29
CAPN1-212ENST00000527887 OPTCQ9UBM4 332 aa13.23□□□□□ -0.29
CAPN1-212ENST00000527887 TSC22D4Q9Y3Q8 395 aa13.23□□□□□ -0.29
CAPN1-212ENST00000527887 PRRG2O14669 202 aa13.22□□□□□ -0.29
CAPN1-212ENST00000527887 ITGA10O75578 1167 aa13.22□□□□□ -0.29
CAPN1-212ENST00000527887 SASH3O75995 380 aa13.22□□□□□ -0.29
CAPN1-212ENST00000527887 IFNA16P05015 189 aa13.22□□□□□ -0.29
CAPN1-212ENST00000527887 EPB42P16452 691 aa13.22□□□□□ -0.29
CAPN1-212ENST00000527887 HIST1H1TP22492 207 aaPredicted RBP13.22□□□□□ -0.29
CAPN1-212ENST00000527887 ATP5A1P25705 553 aaKnown RBP13.22□□□□□ -0.29
CAPN1-212ENST00000527887 PHBP35232 272 aa13.22□□□□□ -0.29
CAPN1-212ENST00000527887 HSD17B3P37058 310 aa13.22□□□□□ -0.29
CAPN1-212ENST00000527887 PIK3CBP42338 1070 aa13.22□□□□□ -0.29
CAPN1-212ENST00000527887 MSH2P43246 934 aa13.22□□□□□ -0.29
CAPN1-212ENST00000527887 SSR4P51571 173 aa13.22□□□□□ -0.29
CAPN1-212ENST00000527887 BMPR2Q13873 1038 aa13.22□□□□□ -0.29
CAPN1-212ENST00000527887 ACAP2Q15057 778 aa13.22□□□□□ -0.29
CAPN1-212ENST00000527887 C3AR1Q16581 482 aa13.22□□□□□ -0.29
CAPN1-212ENST00000527887 ZNF630Q2M218 657 aaPredicted RBP13.22□□□□□ -0.29
CAPN1-212ENST00000527887 AP5B1Q2VPB7 878 aa13.22□□□□□ -0.29
CAPN1-212ENST00000527887 DEPDC1Q5TB30 811 aa13.22□□□□□ -0.29
CAPN1-212ENST00000527887 LIPJQ5W064 366 aa13.22□□□□□ -0.29
CAPN1-212ENST00000527887 HSDL2Q6YN16 418 aa13.22□□□□□ -0.29
CAPN1-212ENST00000527887 CMC1Q7Z7K0 106 aa13.22□□□□□ -0.29
CAPN1-212ENST00000527887 CYP4Z2PQ8N1L4 340 aa13.22□□□□□ -0.29
CAPN1-212ENST00000527887 ACOT4Q8N9L9 421 aa13.22□□□□□ -0.29
CAPN1-212ENST00000527887 FAM47BQ8NA70 645 aa13.22□□□□□ -0.29
CAPN1-212ENST00000527887 OR7G3Q8NG95 312 aa13.22□□□□□ -0.29
CAPN1-212ENST00000527887 OR5L2Q8NGL0 311 aa13.22□□□□□ -0.29
CAPN1-212ENST00000527887 MARVELD3Q96A59 401 aa13.22□□□□□ -0.29
CAPN1-212ENST00000527887 TMEM109Q9BVC6 243 aa13.22□□□□□ -0.29
CAPN1-212ENST00000527887 ALOXE3Q9BYJ1 711 aa13.22□□□□□ -0.29
CAPN1-212ENST00000527887 PPCSQ9HAB8 311 aa13.22□□□□□ -0.29
CAPN1-212ENST00000527887 TIMMDC1Q9NPL8 285 aa13.22□□□□□ -0.29
CAPN1-212ENST00000527887 IGSF5Q9NSI5 407 aa13.22□□□□□ -0.29
CAPN1-212ENST00000527887 PSD3Q9NYI0 1048 aa13.22□□□□□ -0.29
CAPN1-212ENST00000527887 PCDHGA11Q9Y5H2 935 aa13.22□□□□□ -0.29
CAPN1-212ENST00000527887 CREBBPQ92793 2442 aa13.22□□□□□ -0.29
CAPN1-212ENST00000527887 ENO4A6NNW6 628 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms