RNA–Protein interactions for RNA: ENST00000527323.5

CAPN1-208, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-208ENST00000527323 PAQR5Q9NXK6 330 aaPredicted RBP11.96□□□□□ -0.5
CAPN1-208ENST00000527323 OR2AG2A6NM03 316 aa11.95□□□□□ -0.5
CAPN1-208ENST00000527323 NPIPB8E9PQR5 432 aa11.95□□□□□ -0.5
CAPN1-208ENST00000527323 CAPN5O15484 640 aaPredicted RBP11.95□□□□□ -0.5
CAPN1-208ENST00000527323 LILRB3O75022 631 aa11.95□□□□□ -0.5
CAPN1-208ENST00000527323 SOCS5O75159 536 aa11.95□□□□□ -0.5
CAPN1-208ENST00000527323 GASTP01350 101 aa11.95□□□□□ -0.5
CAPN1-208ENST00000527323 ADH1AP07327 375 aa11.95□□□□□ -0.5
CAPN1-208ENST00000527323 ADRA2AP08913 450 aa11.95□□□□□ -0.5
CAPN1-208ENST00000527323 PSMA1P25786 263 aaKnown RBP11.95□□□□□ -0.5
CAPN1-208ENST00000527323 PXNP49023 591 aaPredicted RBP11.95□□□□□ -0.5
CAPN1-208ENST00000527323 CRISP1P54107 249 aa11.95□□□□□ -0.5
CAPN1-208ENST00000527323 HBA1P69905 142 aa11.95□□□□□ -0.5
CAPN1-208ENST00000527323 CDK6Q00534 326 aa11.95□□□□□ -0.5
CAPN1-208ENST00000527323 PTSQ03393 145 aa11.95□□□□□ -0.5
CAPN1-208ENST00000527323 LRRC74AQ0VAA2 488 aa11.95□□□□□ -0.5
CAPN1-208ENST00000527323 BAK1Q16611 211 aa11.95□□□□□ -0.5
CAPN1-208ENST00000527323 USP45Q70EL2 814 aa11.95□□□□□ -0.5
CAPN1-208ENST00000527323 ATCAYQ86WG3 371 aa11.95□□□□□ -0.5
CAPN1-208ENST00000527323 CACUL1Q86Y37 369 aa11.95□□□□□ -0.5
CAPN1-208ENST00000527323 CMTM8Q8IZV2 173 aa11.95□□□□□ -0.5
CAPN1-208ENST00000527323 CACTIN-AS1Q8N1I8 211 aa11.95□□□□□ -0.5
CAPN1-208ENST00000527323 WDR20Q8TBZ3 569 aa11.95□□□□□ -0.5
CAPN1-208ENST00000527323 SORCS1Q8WY21 1168 aa11.95□□□□□ -0.5
CAPN1-208ENST00000527323 ALG14Q96F25 216 aa11.95□□□□□ -0.5
CAPN1-208ENST00000527323 PIP5K1AQ99755 562 aa11.95□□□□□ -0.5
CAPN1-208ENST00000527323 MAPKAP1Q9BPZ7 522 aa11.95□□□□□ -0.5
CAPN1-208ENST00000527323 MTG2Q9H4K7 406 aa11.95□□□□□ -0.5
CAPN1-208ENST00000527323 TRIM39Q9HCM9 518 aa11.95□□□□□ -0.5
CAPN1-208ENST00000527323 ACER3Q9NUN7 267 aa11.95□□□□□ -0.5
CAPN1-208ENST00000527323 ABCB8Q9NUT2 735 aa11.95□□□□□ -0.5
CAPN1-208ENST00000527323 SPATA6Q9NWH7 488 aaPredicted RBP11.95□□□□□ -0.5
CAPN1-208ENST00000527323 A0A075B6Q4 140 aa11.95□□□□□ -0.5
CAPN1-208ENST00000527323 PRAMEF25A6NGN4 478 aa11.95□□□□□ -0.5
CAPN1-208ENST00000527323 FADS2P1A8MWK0 482 aa11.95□□□□□ -0.5
CAPN1-208ENST00000527323 CENPBD1B2RD01 187 aa11.95□□□□□ -0.5
CAPN1-208ENST00000527323 GFYI3L273 518 aa11.95□□□□□ -0.5
CAPN1-208ENST00000527323 ENTPD6O75354 484 aa11.95□□□□□ -0.5
CAPN1-208ENST00000527323 IFNA14P01570 189 aa11.95□□□□□ -0.5
CAPN1-208ENST00000527323 CHRM5P08912 532 aaPredicted RBP11.95□□□□□ -0.5
CAPN1-208ENST00000527323 MPC1LP0DKB6 136 aa11.95□□□□□ -0.5
CAPN1-208ENST00000527323 CHMP24386 653 aa11.95□□□□□ -0.5
CAPN1-208ENST00000527323 CXCR2P25025 360 aa11.95□□□□□ -0.5
CAPN1-208ENST00000527323 FEN1P39748 380 aaKnown RBP11.95□□□□□ -0.5
CAPN1-208ENST00000527323 TGM4P49221 684 aa11.95□□□□□ -0.5
CAPN1-208ENST00000527323 PPP2R2DQ66LE6 453 aa11.95□□□□□ -0.5
CAPN1-208ENST00000527323 FRMPD2BQ6IN97 320 aa11.95□□□□□ -0.5
CAPN1-208ENST00000527323 TRIM69Q86WT6 500 aa11.95□□□□□ -0.5
CAPN1-208ENST00000527323 LAX1Q8IWV1 398 aa11.95□□□□□ -0.5
CAPN1-208ENST00000527323 FOXJ1Q92949 421 aa11.95□□□□□ -0.5
CAPN1-208ENST00000527323 TP53INP1Q96A56 240 aa11.95□□□□□ -0.5
CAPN1-208ENST00000527323 FCRL1Q96LA6 429 aa11.95□□□□□ -0.5
CAPN1-208ENST00000527323 MCCC1Q96RQ3 725 aaPredicted RBP11.95□□□□□ -0.5
CAPN1-208ENST00000527323 PKP4Q99569 1192 aa11.95□□□□□ -0.5
CAPN1-208ENST00000527323 TMEM121BQ9BXQ6 578 aaPredicted RBP11.95□□□□□ -0.5
CAPN1-208ENST00000527323 C3orf14Q9HBI5 128 aa11.95□□□□□ -0.5
CAPN1-208ENST00000527323 DNAJC27Q9NZQ0 273 aa11.95□□□□□ -0.5
CAPN1-208ENST00000527323 CLEC2DQ9UHP7 191 aa11.95□□□□□ -0.5
CAPN1-208ENST00000527323 TMA7Q9Y2S6 64 aaKnown RBP11.95□□□□□ -0.5
CAPN1-208ENST00000527323 PRAMEF33A0A0G2JMD5 474 aa11.95□□□□□ -0.5
CAPN1-208ENST00000527323 TRBC2A0A5B9 178 aa11.95□□□□□ -0.5
CAPN1-208ENST00000527323 MEIOCA2RUB1 952 aa11.95□□□□□ -0.5
CAPN1-208ENST00000527323 SH3D21A4FU49 640 aa11.95□□□□□ -0.5
CAPN1-208ENST00000527323 FAM227AF5H4B4 570 aa11.95□□□□□ -0.5
CAPN1-208ENST00000527323 EIF3FO00303 357 aaPredicted RBP11.95□□□□□ -0.5
CAPN1-208ENST00000527323 WWP2O00308 870 aa11.95□□□□□ -0.5
CAPN1-208ENST00000527323 SAP18O00422 153 aaKnown RBP11.95□□□□□ -0.5
CAPN1-208ENST00000527323 PRAMEF10O60809 474 aa11.95□□□□□ -0.5
CAPN1-208ENST00000527323 SEMA3DO95025 777 aa11.95□□□□□ -0.5
CAPN1-208ENST00000527323 RPS13P62277 151 aaKnown RBP11.95□□□□□ -0.5
CAPN1-208ENST00000527323 RAE1P78406 368 aaKnown RBP11.95□□□□□ -0.5
CAPN1-208ENST00000527323 GPR50Q13585 617 aa11.95□□□□□ -0.5
CAPN1-208ENST00000527323 FAM131AQ6UXB0 335 aa11.95□□□□□ -0.5
CAPN1-208ENST00000527323 RNF130Q86XS8 419 aa11.95□□□□□ -0.5
CAPN1-208ENST00000527323 GPR65Q8IYL9 337 aa11.95□□□□□ -0.5
CAPN1-208ENST00000527323 HUS1BQ8NHY5 278 aa11.95□□□□□ -0.5
CAPN1-208ENST00000527323 UBASH3BQ8TF42 649 aa11.95□□□□□ -0.5
CAPN1-208ENST00000527323 GEMIN6Q8WXD5 167 aaKnown RBP11.95□□□□□ -0.5
CAPN1-208ENST00000527323 OVCA2Q8WZ82 227 aa11.95□□□□□ -0.5
CAPN1-208ENST00000527323 ST6GAL2Q96JF0 529 aa11.95□□□□□ -0.5
CAPN1-208ENST00000527323 BEX2Q9BXY8 128 aa11.95□□□□□ -0.5
CAPN1-208ENST00000527323 GPATCH2Q9NW75 528 aa11.95□□□□□ -0.5
CAPN1-208ENST00000527323 CNOT2Q9NZN8 540 aaKnown RBP11.95□□□□□ -0.5
CAPN1-208ENST00000527323 ENOPH1Q9UHY7 261 aa11.95□□□□□ -0.5
CAPN1-208ENST00000527323 PCDHGB2Q9Y5G2 931 aa11.95□□□□□ -0.5
CAPN1-208ENST00000527323 WNT6Q9Y6F9 365 aa11.95□□□□□ -0.5
CAPN1-208ENST00000527323 H3BN98 237 aa11.94□□□□□ -0.5
CAPN1-208ENST00000527323 MPZL2O60487 215 aa11.94□□□□□ -0.5
CAPN1-208ENST00000527323 UGT2B17O75795 530 aa11.94□□□□□ -0.5
CAPN1-208ENST00000527323 SOX14O95416 240 aa11.94□□□□□ -0.5
CAPN1-208ENST00000527323 PPM1AP35813 382 aa11.94□□□□□ -0.5
CAPN1-208ENST00000527323 STK19P49842 368 aaPredicted RBP11.94□□□□□ -0.5
CAPN1-208ENST00000527323 MC1RQ01726 317 aa11.94□□□□□ -0.5
CAPN1-208ENST00000527323 CDK10Q15131 360 aa11.94□□□□□ -0.5
CAPN1-208ENST00000527323 LEXMQ3ZCV2 418 aa11.94□□□□□ -0.5
CAPN1-208ENST00000527323 ZNF385BQ569K4 471 aa11.94□□□□□ -0.5
CAPN1-208ENST00000527323 TRIM40Q6P9F5 258 aa11.94□□□□□ -0.5
CAPN1-208ENST00000527323 AGTRAPQ6RW13 159 aa11.94□□□□□ -0.5
CAPN1-208ENST00000527323 FAM46DQ8NEK8 389 aa11.94□□□□□ -0.5
CAPN1-208ENST00000527323 OR2AP1Q8NGE2 309 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms