RNA–Protein interactions for RNA: ENST00000526280.1

SMPD1-202, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 1,344 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-202ENST00000526280 C8orf89P0DMQ9 161 aa12.16□□□□□ -0.46
SMPD1-202ENST00000526280 TPP2P29144 1249 aaPredicted RBP12.16□□□□□ -0.46
SMPD1-202ENST00000526280 BTG2P78543 158 aa12.16□□□□□ -0.46
SMPD1-202ENST00000526280 GUCY1A3Q02108 690 aa12.16□□□□□ -0.46
SMPD1-202ENST00000526280 BST1Q10588 318 aa12.16□□□□□ -0.46
SMPD1-202ENST00000526280 TBR1Q16650 682 aa12.16□□□□□ -0.46
SMPD1-202ENST00000526280 FAAH2Q6GMR7 532 aa12.16□□□□□ -0.46
SMPD1-202ENST00000526280 CYP20A1Q6UW02 462 aa12.16□□□□□ -0.46
SMPD1-202ENST00000526280 QSOX2Q6ZRP7 698 aa12.16□□□□□ -0.46
SMPD1-202ENST00000526280 ZNF595Q8IYB9 648 aa12.16□□□□□ -0.46
SMPD1-202ENST00000526280 C1orf52Q8N6N3 182 aaKnown RBP12.16□□□□□ -0.46
SMPD1-202ENST00000526280 FAM47BQ8NA70 645 aa12.16□□□□□ -0.46
SMPD1-202ENST00000526280 TMEM52Q8NDY8 209 aa12.16□□□□□ -0.46
SMPD1-202ENST00000526280 OR11G2Q8NGC1 345 aa12.16□□□□□ -0.46
SMPD1-202ENST00000526280 RAB3IL1Q8TBN0 382 aa12.16□□□□□ -0.46
SMPD1-202ENST00000526280 METTL21AQ8WXB1 218 aa12.16□□□□□ -0.46
SMPD1-202ENST00000526280 C11orf24Q96F05 449 aaPredicted RBP12.16□□□□□ -0.46
SMPD1-202ENST00000526280 VPS50Q96JG6 964 aa12.16□□□□□ -0.46
SMPD1-202ENST00000526280 CSF3RQ99062 836 aa12.16□□□□□ -0.46
SMPD1-202ENST00000526280 SORT1Q99523 831 aa12.16□□□□□ -0.46
SMPD1-202ENST00000526280 ILKAPQ9H0C8 392 aaPredicted RBP12.16□□□□□ -0.46
SMPD1-202ENST00000526280 LYARQ9NX58 379 aaKnown RBP12.16□□□□□ -0.46
SMPD1-202ENST00000526280 PHF11Q9UIL8 331 aa12.16□□□□□ -0.46
SMPD1-202ENST00000526280 HAO1Q9UJM8 370 aa12.16□□□□□ -0.46
SMPD1-202ENST00000526280 FIS1Q9Y3D6 152 aa12.16□□□□□ -0.46
SMPD1-202ENST00000526280 RAP2CQ9Y3L5 183 aa12.16□□□□□ -0.46
SMPD1-202ENST00000526280 ATG4BQ9Y4P1 393 aa12.16□□□□□ -0.46
SMPD1-202ENST00000526280 MMACHCQ9Y4U1 282 aa12.16□□□□□ -0.46
SMPD1-202ENST00000526280 CCL27Q9Y4X3 112 aa12.16□□□□□ -0.46
SMPD1-202ENST00000526280 KCNMB2Q9Y691 235 aa12.16□□□□□ -0.46
SMPD1-202ENST00000526280 SPACA6W5XKT8 324 aa12.16□□□□□ -0.46
SMPD1-202ENST00000526280 MED13Q9UHV7 2174 aa12.16□□□□□ -0.46
SMPD1-202ENST00000526280 A0A1W2PQ72 361 aa12.15□□□□□ -0.46
SMPD1-202ENST00000526280 BLACEA4D250 179 aa12.15□□□□□ -0.46
SMPD1-202ENST00000526280 NPIPB8E9PQR5 432 aa12.15□□□□□ -0.46
SMPD1-202ENST00000526280 SLC28A1O00337 649 aa12.15□□□□□ -0.46
SMPD1-202ENST00000526280 CLDN4O14493 209 aa12.15□□□□□ -0.46
SMPD1-202ENST00000526280 RSL1D1O76021 490 aaKnown RBP12.15□□□□□ -0.46
SMPD1-202ENST00000526280 ACPPP15309 386 aa12.15□□□□□ -0.46
SMPD1-202ENST00000526280 CPN2P22792 545 aa12.15□□□□□ -0.46
SMPD1-202ENST00000526280 LSP1P33241 339 aa12.15□□□□□ -0.46
SMPD1-202ENST00000526280 HNRNPFP52597 415 aaKnown RBP12.15□□□□□ -0.46
SMPD1-202ENST00000526280 HSD17B7P56937 341 aa12.15□□□□□ -0.46
SMPD1-202ENST00000526280 RHDQ02161 417 aa12.15□□□□□ -0.46
SMPD1-202ENST00000526280 NSDHLQ15738 373 aa12.15□□□□□ -0.46
SMPD1-202ENST00000526280 IMPG1Q17R60 797 aa12.15□□□□□ -0.46
SMPD1-202ENST00000526280 SPIN4Q56A73 249 aa12.15□□□□□ -0.46
SMPD1-202ENST00000526280 CCNYL2Q5T2Q4 361 aa12.15□□□□□ -0.46
SMPD1-202ENST00000526280 ATG16L1Q676U5 607 aa12.15□□□□□ -0.46
SMPD1-202ENST00000526280 GALNT18Q6P9A2 607 aa12.15□□□□□ -0.46
SMPD1-202ENST00000526280 BORAQ6PGQ7 559 aa12.15□□□□□ -0.46
SMPD1-202ENST00000526280 SCUBE1Q8IWY4 988 aa12.15□□□□□ -0.46
SMPD1-202ENST00000526280 TRIM42Q8IWZ5 723 aa12.15□□□□□ -0.46
SMPD1-202ENST00000526280 ZNF781Q8N8C0 355 aa12.15□□□□□ -0.46
SMPD1-202ENST00000526280 TMEM102Q8N9M5 508 aaPredicted RBP12.15□□□□□ -0.46
SMPD1-202ENST00000526280 AGR3Q8TD06 166 aa12.15□□□□□ -0.46
SMPD1-202ENST00000526280 TWIST2Q8WVJ9 160 aa12.15□□□□□ -0.46
SMPD1-202ENST00000526280 APOBEC4Q8WW27 367 aaKnown RBP12.15□□□□□ -0.46
SMPD1-202ENST00000526280 TTC9Q92623 222 aa12.15□□□□□ -0.46
SMPD1-202ENST00000526280 TSLPQ969D9 159 aa12.15□□□□□ -0.46
SMPD1-202ENST00000526280 C8orf44Q96CB5 159 aa12.15□□□□□ -0.46
SMPD1-202ENST00000526280 APIPQ96GX9 242 aa12.15□□□□□ -0.46
SMPD1-202ENST00000526280 FER1L6-AS2Q96M78 137 aa12.15□□□□□ -0.46
SMPD1-202ENST00000526280 PTCHD1Q96NR3 888 aa12.15□□□□□ -0.46
SMPD1-202ENST00000526280 MANSC1Q9H8J5 431 aa12.15□□□□□ -0.46
SMPD1-202ENST00000526280 NECTIN3Q9NQS3 549 aa12.15□□□□□ -0.46
SMPD1-202ENST00000526280 PRDM9Q9NQV7 894 aa12.15□□□□□ -0.46
SMPD1-202ENST00000526280 PRTFDC1Q9NRG1 225 aa12.15□□□□□ -0.46
SMPD1-202ENST00000526280 THAP1Q9NVV9 213 aa12.15□□□□□ -0.46
SMPD1-202ENST00000526280 SIRT5Q9NXA8 310 aa12.15□□□□□ -0.46
SMPD1-202ENST00000526280 FBXL4Q9UKA2 621 aa12.15□□□□□ -0.46
SMPD1-202ENST00000526280 MRPS33Q9Y291 106 aaKnown RBP12.15□□□□□ -0.46
SMPD1-202ENST00000526280 PTGDR2Q9Y5Y4 395 aa12.15□□□□□ -0.46
SMPD1-202ENST00000526280 IGKV3D-11A0A0A0MRZ8 115 aa12.14□□□□□ -0.47
SMPD1-202ENST00000526280 IGHV1-45A0A0A0MS14 117 aa12.14□□□□□ -0.47
SMPD1-202ENST00000526280 A0A1W2PR48 441 aa12.14□□□□□ -0.47
SMPD1-202ENST00000526280 ARHGAP10A1A4S6 786 aa12.14□□□□□ -0.47
SMPD1-202ENST00000526280 ARGFXA6NJG6 315 aa12.14□□□□□ -0.47
SMPD1-202ENST00000526280 KLF11O14901 512 aa12.14□□□□□ -0.47
SMPD1-202ENST00000526280 RGS14O43566 566 aa12.14□□□□□ -0.47
SMPD1-202ENST00000526280 CTNSO60931 367 aa12.14□□□□□ -0.47
SMPD1-202ENST00000526280 SNNO75324 88 aaPredicted RBP12.14□□□□□ -0.47
SMPD1-202ENST00000526280 LINC00032P0C843 101 aa12.14□□□□□ -0.47
SMPD1-202ENST00000526280 MAOAP21397 527 aa12.14□□□□□ -0.47
SMPD1-202ENST00000526280 PRPH2P23942 346 aa12.14□□□□□ -0.47
SMPD1-202ENST00000526280 TLX1P31314 330 aaPredicted RBP12.14□□□□□ -0.47
SMPD1-202ENST00000526280 RPL14P50914 215 aaKnown RBP12.14□□□□□ -0.47
SMPD1-202ENST00000526280 MAPK12P53778 367 aa12.14□□□□□ -0.47
SMPD1-202ENST00000526280 RRADP55042 308 aa12.14□□□□□ -0.47
SMPD1-202ENST00000526280 RAE1P78406 368 aaKnown RBP12.14□□□□□ -0.47
SMPD1-202ENST00000526280 TNFRSF17Q02223 184 aa12.14□□□□□ -0.47
SMPD1-202ENST00000526280 BTKQ06187 659 aa12.14□□□□□ -0.47
SMPD1-202ENST00000526280 ACSM2AQ08AH3 577 aa12.14□□□□□ -0.47
SMPD1-202ENST00000526280 SPDYAQ5MJ70 313 aa12.14□□□□□ -0.47
SMPD1-202ENST00000526280 DCAF10Q5QP82 559 aa12.14□□□□□ -0.47
SMPD1-202ENST00000526280 ACSM2BQ68CK6 577 aa12.14□□□□□ -0.47
SMPD1-202ENST00000526280 C18orf63Q68DL7 685 aa12.14□□□□□ -0.47
SMPD1-202ENST00000526280 Q6ZSR9 355 aa12.14□□□□□ -0.47
SMPD1-202ENST00000526280 LANCL3Q6ZV70 420 aa12.14□□□□□ -0.47
SMPD1-202ENST00000526280 NDUFAF7Q7L592 441 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms