RNA–Protein interactions for RNA: ENST00000526054.5

VPS28-204, Transcript of VPS28, ESCRT-I subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS28, Length 892 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS28-204ENST00000526054 FOXE1O00358 373 aaPredicted RBP9.54□□□□□ -0.88
VPS28-204ENST00000526054 FFAR3O14843 346 aa9.54□□□□□ -0.88
VPS28-204ENST00000526054 GPR42O15529 346 aa9.54□□□□□ -0.88
VPS28-204ENST00000526054 LRRTM2O43300 516 aa9.54□□□□□ -0.88
VPS28-204ENST00000526054 B3GALT2O43825 422 aa9.54□□□□□ -0.88
VPS28-204ENST00000526054 CRCPO75575 148 aa9.54□□□□□ -0.88
VPS28-204ENST00000526054 OR4F21O95013 312 aa9.54□□□□□ -0.88
VPS28-204ENST00000526054 ESRRBO95718 433 aa9.54□□□□□ -0.88
VPS28-204ENST00000526054 TGFB1P01137 390 aa9.54□□□□□ -0.88
VPS28-204ENST00000526054 KRT6AP02538 564 aa9.54□□□□□ -0.88
VPS28-204ENST00000526054 KRT6BP04259 564 aa9.54□□□□□ -0.88
VPS28-204ENST00000526054 ZGLP1P0C6A0 271 aa9.54□□□□□ -0.88
VPS28-204ENST00000526054 SMIM10L1P0DMW3 83 aa9.54□□□□□ -0.88
VPS28-204ENST00000526054 IL10P22301 178 aa9.54□□□□□ -0.88
VPS28-204ENST00000526054 PTX3P26022 381 aaPredicted RBP9.54□□□□□ -0.88
VPS28-204ENST00000526054 ALDH3A1P30838 453 aa9.54□□□□□ -0.88
VPS28-204ENST00000526054 ETV4P43268 484 aa9.54□□□□□ -0.88
VPS28-204ENST00000526054 KRT6CP48668 564 aa9.54□□□□□ -0.88
VPS28-204ENST00000526054 PLA2G16P53816 162 aa9.54□□□□□ -0.88
VPS28-204ENST00000526054 RPS13P62277 151 aaKnown RBP9.54□□□□□ -0.88
VPS28-204ENST00000526054 BTN3A2P78410 334 aa9.54□□□□□ -0.88
VPS28-204ENST00000526054 ARG2P78540 354 aa9.54□□□□□ -0.88
VPS28-204ENST00000526054 MAT1AQ00266 395 aaKnown RBP9.54□□□□□ -0.88
VPS28-204ENST00000526054 Q0VFX4 171 aa9.54□□□□□ -0.88
VPS28-204ENST00000526054 KHDRBS2Q5VWX1 349 aaKnown RBP9.54□□□□□ -0.88
VPS28-204ENST00000526054 LETMD1Q6P1Q0 360 aa9.54□□□□□ -0.88
VPS28-204ENST00000526054 PDSS2Q86YH6 399 aa9.54□□□□□ -0.88
VPS28-204ENST00000526054 HOMEZQ8IX15 550 aa9.54□□□□□ -0.88
VPS28-204ENST00000526054 CDYL2Q8N8U2 506 aa9.54□□□□□ -0.88
VPS28-204ENST00000526054 PPP1R14CQ8TAE6 165 aa9.54□□□□□ -0.88
VPS28-204ENST00000526054 WDR20Q8TBZ3 569 aa9.54□□□□□ -0.88
VPS28-204ENST00000526054 AGAP11Q8TF27 550 aa9.54□□□□□ -0.88
VPS28-204ENST00000526054 FAR1Q8WVX9 515 aa9.54□□□□□ -0.88
VPS28-204ENST00000526054 SELENOMQ8WWX9 145 aa9.54□□□□□ -0.88
VPS28-204ENST00000526054 C8orf44Q96CB5 159 aa9.54□□□□□ -0.88
VPS28-204ENST00000526054 TLCD1Q96CP7 247 aa9.54□□□□□ -0.88
VPS28-204ENST00000526054 SMIM10Q96HG1 83 aa9.54□□□□□ -0.88
VPS28-204ENST00000526054 KCNC2Q96PR1 638 aa9.54□□□□□ -0.88
VPS28-204ENST00000526054 F2RL3Q96RI0 385 aa9.54□□□□□ -0.88
VPS28-204ENST00000526054 MTERF1Q99551 399 aaKnown RBP9.54□□□□□ -0.88
VPS28-204ENST00000526054 SERPINI1Q99574 410 aa9.54□□□□□ -0.88
VPS28-204ENST00000526054 MESP1Q9BRJ9 268 aa9.54□□□□□ -0.88
VPS28-204ENST00000526054 TBCDQ9BTW9 1192 aa9.54□□□□□ -0.88
VPS28-204ENST00000526054 NPLQ9BXD5 320 aaPredicted RBP9.54□□□□□ -0.88
VPS28-204ENST00000526054 MID1IP1Q9NPA3 183 aa9.54□□□□□ -0.88
VPS28-204ENST00000526054 MED4Q9NPJ6 270 aa9.54□□□□□ -0.88
VPS28-204ENST00000526054 OLAHQ9NV23 265 aa9.54□□□□□ -0.88
VPS28-204ENST00000526054 PSD3Q9NYI0 1048 aa9.54□□□□□ -0.88
VPS28-204ENST00000526054 PPT2Q9UMR5 302 aa9.54□□□□□ -0.88
VPS28-204ENST00000526054 SCN2AQ99250 2005 aa9.54□□□□□ -0.88
VPS28-204ENST00000526054 POLEQ07864 2286 aa9.54□□□□□ -0.88
VPS28-204ENST00000526054 CREBBPQ92793 2442 aa9.54□□□□□ -0.88
VPS28-204ENST00000526054 SVILO95425 2214 aa9.54□□□□□ -0.88
VPS28-204ENST00000526054 DIDO1Q9BTC0 2240 aaKnown RBP9.54□□□□□ -0.88
VPS28-204ENST00000526054 CNTRLQ7Z7A1 2325 aa9.53□□□□□ -0.88
VPS28-204ENST00000526054 A0A0G2JN53 185 aa9.53□□□□□ -0.88
VPS28-204ENST00000526054 A0A1B0GTL3 188 aa9.53□□□□□ -0.88
VPS28-204ENST00000526054 DYTNA2CJ06 578 aa9.53□□□□□ -0.88
VPS28-204ENST00000526054 MAGEB17A8MXT2 336 aa9.53□□□□□ -0.88
VPS28-204ENST00000526054 C4orf51C9J302 202 aa9.53□□□□□ -0.88
VPS28-204ENST00000526054 PSMD12O00232 456 aaPredicted RBP9.53□□□□□ -0.88
VPS28-204ENST00000526054 PPP6CO00743 305 aa9.53□□□□□ -0.88
VPS28-204ENST00000526054 NPHS1O60500 1241 aa9.53□□□□□ -0.88
VPS28-204ENST00000526054 SH3BGRLO75368 114 aa9.53□□□□□ -0.88
VPS28-204ENST00000526054 SEMA3DO95025 777 aa9.53□□□□□ -0.88
VPS28-204ENST00000526054 TBX6O95947 436 aaPredicted RBP9.53□□□□□ -0.88
VPS28-204ENST00000526054 BPGMP07738 259 aa9.53□□□□□ -0.88
VPS28-204ENST00000526054 CYC1P08574 325 aa9.53□□□□□ -0.88
VPS28-204ENST00000526054 COX6A1P12074 109 aa9.53□□□□□ -0.88
VPS28-204ENST00000526054 HSD3B1P14060 373 aa9.53□□□□□ -0.88
VPS28-204ENST00000526054 JAK1P23458 1154 aa9.53□□□□□ -0.88
VPS28-204ENST00000526054 HSD3B2P26439 372 aa9.53□□□□□ -0.88
VPS28-204ENST00000526054 SERPINB5P36952 375 aa9.53□□□□□ -0.88
VPS28-204ENST00000526054 SSR2P43308 183 aa9.53□□□□□ -0.88
VPS28-204ENST00000526054 XCR1P46094 333 aa9.53□□□□□ -0.88
VPS28-204ENST00000526054 SERPINB4P48594 390 aa9.53□□□□□ -0.88
VPS28-204ENST00000526054 ARFIP1P53367 373 aa9.53□□□□□ -0.88
VPS28-204ENST00000526054 MTTPP55157 894 aa9.53□□□□□ -0.88
VPS28-204ENST00000526054 MAGOHP61326 146 aaKnown RBP9.53□□□□□ -0.88
VPS28-204ENST00000526054 SNRPNP63162 240 aaKnown RBP9.53□□□□□ -0.88
VPS28-204ENST00000526054 EEF1A2Q05639 463 aaKnown RBP9.53□□□□□ -0.88
VPS28-204ENST00000526054 CUL3Q13618 768 aa9.53□□□□□ -0.88
VPS28-204ENST00000526054 RCN2Q14257 317 aa9.53□□□□□ -0.88
VPS28-204ENST00000526054 SYT16Q17RD7 645 aa9.53□□□□□ -0.88
VPS28-204ENST00000526054 AP5B1Q2VPB7 878 aa9.53□□□□□ -0.88
VPS28-204ENST00000526054 VWA2Q5GFL6 755 aa9.53□□□□□ -0.88
VPS28-204ENST00000526054 DEPDC1Q5TB30 811 aa9.53□□□□□ -0.88
VPS28-204ENST00000526054 MFSD4BQ5TF39 518 aa9.53□□□□□ -0.88
VPS28-204ENST00000526054 ABHD17CQ6PCB6 329 aa9.53□□□□□ -0.88
VPS28-204ENST00000526054 NUDCD3Q8IVD9 361 aa9.53□□□□□ -0.88
VPS28-204ENST00000526054 ZC3H7AQ8IWR0 971 aaKnown RBP9.53□□□□□ -0.88
VPS28-204ENST00000526054 KBTBD2Q8IY47 623 aa9.53□□□□□ -0.88
VPS28-204ENST00000526054 BCORP1Q8N888 145 aa9.53□□□□□ -0.88
VPS28-204ENST00000526054 OR5T3Q8NGG3 340 aa9.53□□□□□ -0.88
VPS28-204ENST00000526054 OR51Q1Q8NH59 317 aa9.53□□□□□ -0.88
VPS28-204ENST00000526054 METTL6Q8TCB7 284 aa9.53□□□□□ -0.88
VPS28-204ENST00000526054 ADAMTS18Q8TE60 1221 aa9.53□□□□□ -0.88
VPS28-204ENST00000526054 RGMAQ96B86 450 aa9.53□□□□□ -0.88
VPS28-204ENST00000526054 QRFPRQ96P65 431 aa9.53□□□□□ -0.88
VPS28-204ENST00000526054 OR1F2PQ96R84 312 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms