RNA–Protein interactions for RNA: ENST00000525209.5

CD44-213, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 4

Gene CD44, Length 574 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-213ENST00000525209 GSRP00390 522 aa4.2□□□□□ -1.74
CD44-213ENST00000525209 IGHV2-70P01814 119 aa4.2□□□□□ -1.74
CD44-213ENST00000525209 CYP1A1P04798 512 aaPredicted RBP4.2□□□□□ -1.74
CD44-213ENST00000525209 ANXA4P09525 319 aaPredicted RBP4.2□□□□□ -1.74
CD44-213ENST00000525209 BMP7P18075 431 aa4.2□□□□□ -1.74
CD44-213ENST00000525209 POLR2CP19387 275 aaPredicted RBP4.2□□□□□ -1.74
CD44-213ENST00000525209 CCNOP22674 350 aa4.2□□□□□ -1.74
CD44-213ENST00000525209 ACKR3P25106 362 aa4.2□□□□□ -1.74
CD44-213ENST00000525209 HIBADHP31937 336 aaKnown RBP4.2□□□□□ -1.74
CD44-213ENST00000525209 ARRB2P32121 409 aa4.2□□□□□ -1.74
CD44-213ENST00000525209 OTX1P32242 354 aaPredicted RBP4.2□□□□□ -1.74
CD44-213ENST00000525209 CD96P40200 585 aa4.2□□□□□ -1.74
CD44-213ENST00000525209 MAGEA9P43362 315 aa4.2□□□□□ -1.74
CD44-213ENST00000525209 KCNJ3P48549 501 aa4.2□□□□□ -1.74
CD44-213ENST00000525209 SLC9A3P48764 834 aa4.2□□□□□ -1.74
CD44-213ENST00000525209 ZNF84P51523 738 aa4.2□□□□□ -1.74
CD44-213ENST00000525209 NUDT6P53370 316 aa4.2□□□□□ -1.74
CD44-213ENST00000525209 RABGGTBP53611 331 aa4.2□□□□□ -1.74
CD44-213ENST00000525209 CDH6P55285 790 aa4.2□□□□□ -1.74
CD44-213ENST00000525209 SOX10P56693 466 aa4.2□□□□□ -1.74
CD44-213ENST00000525209 SUMO2P61956 95 aaKnown RBP4.2□□□□□ -1.74
CD44-213ENST00000525209 SNRPEP62304 92 aaKnown RBP4.2□□□□□ -1.74
CD44-213ENST00000525209 IRF8Q02556 426 aa4.2□□□□□ -1.74
CD44-213ENST00000525209 FOXM1Q08050 763 aa4.2□□□□□ -1.74
CD44-213ENST00000525209 PJVKQ0ZLH3 352 aa4.2□□□□□ -1.74
CD44-213ENST00000525209 STIM1Q13586 685 aa4.2□□□□□ -1.74
CD44-213ENST00000525209 CYP1B1Q16678 543 aa4.2□□□□□ -1.74
CD44-213ENST00000525209 MEP1AQ16819 746 aa4.2□□□□□ -1.74
CD44-213ENST00000525209 SGSM1Q2NKQ1 1148 aa4.2□□□□□ -1.74
CD44-213ENST00000525209 ITPRIPL2Q3MIP1 535 aa4.2□□□□□ -1.74
CD44-213ENST00000525209 CD300EQ496F6 205 aaPredicted RBP4.2□□□□□ -1.74
CD44-213ENST00000525209 EPHA10Q5JZY3 1008 aa4.2□□□□□ -1.74
CD44-213ENST00000525209 C20orf194Q5TEA3 1177 aa4.2□□□□□ -1.74
CD44-213ENST00000525209 GPR157Q5UAW9 335 aa4.2□□□□□ -1.74
CD44-213ENST00000525209 SUSD4Q5VX71 490 aa4.2□□□□□ -1.74
CD44-213ENST00000525209 ALS2CLQ60I27 953 aa4.2□□□□□ -1.74
CD44-213ENST00000525209 NSUN5P2Q63ZY6 315 aa4.2□□□□□ -1.74
CD44-213ENST00000525209 SNRNP48Q6IEG0 339 aaKnown RBP4.2□□□□□ -1.74
CD44-213ENST00000525209 SCYL2Q6P3W7 929 aa4.2□□□□□ -1.74
CD44-213ENST00000525209 SASS6Q6UVJ0 657 aa4.2□□□□□ -1.74
CD44-213ENST00000525209 CBLL1Q75N03 491 aa4.2□□□□□ -1.74
CD44-213ENST00000525209 SSX9Q7RTT3 188 aa4.2□□□□□ -1.74
CD44-213ENST00000525209 SPRED2Q7Z698 418 aa4.2□□□□□ -1.74
CD44-213ENST00000525209 SCD5Q86SK9 330 aa4.2□□□□□ -1.74
CD44-213ENST00000525209 AMIGO1Q86WK6 493 aa4.2□□□□□ -1.74
CD44-213ENST00000525209 TMPRSS12Q86WS5 348 aa4.2□□□□□ -1.74
CD44-213ENST00000525209 STX12Q86Y82 276 aa4.2□□□□□ -1.74
CD44-213ENST00000525209 CHERPQ8IWX8 916 aaKnown RBP4.2□□□□□ -1.74
CD44-213ENST00000525209 LSMEM2Q8N112 164 aa4.2□□□□□ -1.74
CD44-213ENST00000525209 LCORLQ8N3X6 602 aa4.2□□□□□ -1.74
CD44-213ENST00000525209 TMEM217Q8N7C4 229 aa4.2□□□□□ -1.74
CD44-213ENST00000525209 C12orf76Q8N812 135 aaPredicted RBP4.2□□□□□ -1.74
CD44-213ENST00000525209 GATSQ8NAP1 163 aa4.2□□□□□ -1.74
CD44-213ENST00000525209 ICA1LQ8NDH6 482 aa4.2□□□□□ -1.74
CD44-213ENST00000525209 OR8J2Q8NGG1 315 aa4.2□□□□□ -1.74
CD44-213ENST00000525209 OR1J2Q8NGS2 313 aa4.2□□□□□ -1.74
CD44-213ENST00000525209 SLC44A1Q8WWI5 657 aa4.2□□□□□ -1.74
CD44-213ENST00000525209 CACNG8Q8WXS5 425 aa4.2□□□□□ -1.74
CD44-213ENST00000525209 ARNTL2Q8WYA1 636 aa4.2□□□□□ -1.74
CD44-213ENST00000525209 ELMO1Q92556 727 aa4.2□□□□□ -1.74
CD44-213ENST00000525209 PHYHIPQ92561 330 aa4.2□□□□□ -1.74
CD44-213ENST00000525209 TM4SF19Q96DZ7 209 aa4.2□□□□□ -1.74
CD44-213ENST00000525209 PGBD1Q96JS3 809 aa4.2□□□□□ -1.74
CD44-213ENST00000525209 HRASLS5Q96KN8 279 aa4.2□□□□□ -1.74
CD44-213ENST00000525209 GUCD1Q96NT3 240 aa4.2□□□□□ -1.74
CD44-213ENST00000525209 ACCSQ96QU6 501 aa4.2□□□□□ -1.74
CD44-213ENST00000525209 PRR25Q96S07 402 aa4.2□□□□□ -1.74
CD44-213ENST00000525209 SLC22A12Q96S37 553 aa4.2□□□□□ -1.74
CD44-213ENST00000525209 GFI1Q99684 422 aa4.2□□□□□ -1.74
CD44-213ENST00000525209 OMDQ99983 421 aa4.2□□□□□ -1.74
CD44-213ENST00000525209 CENPKQ9BS16 269 aa4.2□□□□□ -1.74
CD44-213ENST00000525209 FNDC11Q9BVV2 318 aa4.2□□□□□ -1.74
CD44-213ENST00000525209 PRRG3Q9BZD7 231 aa4.2□□□□□ -1.74
CD44-213ENST00000525209 TRIM9Q9C026 710 aa4.2□□□□□ -1.74
CD44-213ENST00000525209 DCLK3Q9C098 648 aa4.2□□□□□ -1.74
CD44-213ENST00000525209 POLR3FQ9H1D9 316 aaPredicted RBP4.2□□□□□ -1.74
CD44-213ENST00000525209 DPAGT1Q9H3H5 408 aa4.2□□□□□ -1.74
CD44-213ENST00000525209 RANBP3Q9H6Z4 567 aaPredicted RBP4.2□□□□□ -1.74
CD44-213ENST00000525209 ACTR5Q9H9F9 607 aaPredicted RBP4.2□□□□□ -1.74
CD44-213ENST00000525209 ZNF302Q9NR11 478 aa4.2□□□□□ -1.74
CD44-213ENST00000525209 C20orf96Q9NUD7 363 aaPredicted RBP4.2□□□□□ -1.74
CD44-213ENST00000525209 MTPAPQ9NVV4 582 aaKnown RBP eCLIP4.2□□□□□ -1.74
CD44-213ENST00000525209 GAR1Q9NY12 217 aaKnown RBP4.2□□□□□ -1.74
CD44-213ENST00000525209 TUBA8Q9NY65 449 aaPredicted RBP4.2□□□□□ -1.74
CD44-213ENST00000525209 ADAM22Q9P0K1 906 aa4.2□□□□□ -1.74
CD44-213ENST00000525209 PIPOXQ9P0Z9 390 aa4.2□□□□□ -1.74
CD44-213ENST00000525209 TXNDC16Q9P2K2 825 aa4.2□□□□□ -1.74
CD44-213ENST00000525209 P2RX2Q9UBL9 471 aa4.2□□□□□ -1.74
CD44-213ENST00000525209 GPR160Q9UJ42 338 aa4.2□□□□□ -1.74
CD44-213ENST00000525209 ADAM21Q9UKJ8 722 aa4.2□□□□□ -1.74
CD44-213ENST00000525209 ADAM28Q9UKQ2 775 aa4.2□□□□□ -1.74
CD44-213ENST00000525209 FBXO4Q9UKT5 387 aa4.2□□□□□ -1.74
CD44-213ENST00000525209 VANGL2Q9ULK5 521 aa4.2□□□□□ -1.74
CD44-213ENST00000525209 CFL2Q9Y281 166 aa4.2□□□□□ -1.74
CD44-213ENST00000525209 KLK4Q9Y5K2 254 aa4.2□□□□□ -1.74
CD44-213ENST00000525209 PUS1Q9Y606 427 aaKnown RBP eCLIP4.2□□□□□ -1.74
CD44-213ENST00000525209 CDC42BPBQ9Y5S2 1711 aa4.2□□□□□ -1.74
CD44-213ENST00000525209 ZMYM6O95789 1325 aa4.2□□□□□ -1.74
CD44-213ENST00000525209 ATXN2Q99700 1313 aaKnown RBP4.2□□□□□ -1.74
CD44-213ENST00000525209 WDR33Q9C0J8 1336 aaKnown RBP4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms