RNA–Protein interactions for RNA: ENST00000525013.1

CAPN1-203, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-203ENST00000525013 MTERF1Q99551 399 aaKnown RBP17.32■□□□□ 0.36
CAPN1-203ENST00000525013 CCDC77Q9BR77 488 aa17.32■□□□□ 0.36
CAPN1-203ENST00000525013 FUT8Q9BYC5 575 aa17.32■□□□□ 0.36
CAPN1-203ENST00000525013 KCMF1Q9P0J7 381 aa17.32■□□□□ 0.36
CAPN1-203ENST00000525013 ADGRE2Q9UHX3 823 aa17.32■□□□□ 0.36
CAPN1-203ENST00000525013 CLDN16Q9Y5I7 305 aa17.32■□□□□ 0.36
CAPN1-203ENST00000525013 TNPO3Q9Y5L0 923 aaKnown RBP17.32■□□□□ 0.36
CAPN1-203ENST00000525013 CLCA3PQ9Y6N3 262 aa17.32■□□□□ 0.36
CAPN1-203ENST00000525013 CDK2AP1O14519 115 aa17.31■□□□□ 0.36
CAPN1-203ENST00000525013 KRT38O76015 456 aa17.31■□□□□ 0.36
CAPN1-203ENST00000525013 SIX3O95343 332 aaPredicted RBP17.31■□□□□ 0.36
CAPN1-203ENST00000525013 CLDN1O95832 211 aa17.31■□□□□ 0.36
CAPN1-203ENST00000525013 TNNI3P19429 210 aa17.31■□□□□ 0.36
CAPN1-203ENST00000525013 ECHS1P30084 290 aa17.31■□□□□ 0.36
CAPN1-203ENST00000525013 ARL1P40616 181 aaPredicted RBP17.31■□□□□ 0.36
CAPN1-203ENST00000525013 ALDH6A1Q02252 535 aaKnown RBP17.31■□□□□ 0.36
CAPN1-203ENST00000525013 RBPJQ06330 500 aa17.31■□□□□ 0.36
CAPN1-203ENST00000525013 ELAVL1Q15717 326 aaKnown RBP17.31■□□□□ 0.36
CAPN1-203ENST00000525013 DEPDC1Q5TB30 811 aa17.31■□□□□ 0.36
CAPN1-203ENST00000525013 LIPJQ5W064 366 aa17.31■□□□□ 0.36
CAPN1-203ENST00000525013 CRYBG3Q68DQ2 2970 aa17.31■□□□□ 0.36
CAPN1-203ENST00000525013 GOLGA7Q7Z5G4 137 aa17.31■□□□□ 0.36
CAPN1-203ENST00000525013 PNPLA5Q7Z6Z6 429 aaPredicted RBP17.31■□□□□ 0.36
CAPN1-203ENST00000525013 TMEM132CQ8N3T6 1108 aa17.31■□□□□ 0.36
CAPN1-203ENST00000525013 FAM98AQ8NCA5 519 aaKnown RBP17.31■□□□□ 0.36
CAPN1-203ENST00000525013 TMEM125Q96AQ2 219 aa17.31■□□□□ 0.36
CAPN1-203ENST00000525013 RGMAQ96B86 450 aa17.31■□□□□ 0.36
CAPN1-203ENST00000525013 CENPKQ9BS16 269 aa17.31■□□□□ 0.36
CAPN1-203ENST00000525013 SORBS1Q9BX66 1292 aaKnown RBP17.31■□□□□ 0.36
CAPN1-203ENST00000525013 ALOXE3Q9BYJ1 711 aa17.31■□□□□ 0.36
CAPN1-203ENST00000525013 TSPAN10Q9H1Z9 355 aaPredicted RBP17.31■□□□□ 0.36
CAPN1-203ENST00000525013 IPPKQ9H8X2 491 aa17.31■□□□□ 0.36
CAPN1-203ENST00000525013 ZNF358Q9NW07 568 aa17.31■□□□□ 0.36
CAPN1-203ENST00000525013 PCDHGA11Q9Y5H2 935 aa17.31■□□□□ 0.36
CAPN1-203ENST00000525013 A0A087WUV0 522 aaPredicted RBP17.3■□□□□ 0.36
CAPN1-203ENST00000525013 TRGV8A0A0C4DH27 118 aa17.3■□□□□ 0.36
CAPN1-203ENST00000525013 KLK8O60259 260 aa17.3■□□□□ 0.36
CAPN1-203ENST00000525013 LDB3O75112 727 aa17.3■□□□□ 0.36
CAPN1-203ENST00000525013 ZFAND5O76080 213 aa17.3■□□□□ 0.36
CAPN1-203ENST00000525013 RBP1P09455 135 aa17.3■□□□□ 0.36
CAPN1-203ENST00000525013 CPN2P22792 545 aa17.3■□□□□ 0.36
CAPN1-203ENST00000525013 COL8A1P27658 744 aa17.3■□□□□ 0.36
CAPN1-203ENST00000525013 PIK3CBP42338 1070 aa17.3■□□□□ 0.36
CAPN1-203ENST00000525013 PIK3CGP48736 1102 aa17.3■□□□□ 0.36
CAPN1-203ENST00000525013 HLCSP50747 726 aa17.3■□□□□ 0.36
CAPN1-203ENST00000525013 PHEXP78562 749 aa17.3■□□□□ 0.36
CAPN1-203ENST00000525013 ID2Q02363 134 aa17.3■□□□□ 0.36
CAPN1-203ENST00000525013 PCBP2Q15366 365 aaKnown RBP eCLIP17.3■□□□□ 0.36
CAPN1-203ENST00000525013 CPSF6Q16630 551 aaKnown RBP eCLIP17.3■□□□□ 0.36
CAPN1-203ENST00000525013 TECRLQ5HYJ1 363 aa17.3■□□□□ 0.36
CAPN1-203ENST00000525013 OR4C11Q6IEV9 310 aa17.3■□□□□ 0.36
CAPN1-203ENST00000525013 TMEM156Q8N614 296 aa17.3■□□□□ 0.36
CAPN1-203ENST00000525013 PTGR2Q8N8N7 351 aaPredicted RBP17.3■□□□□ 0.36
CAPN1-203ENST00000525013 SREK1Q8WXA9 508 aaKnown RBP17.3■□□□□ 0.36
CAPN1-203ENST00000525013 ATP6V1E2Q96A05 226 aa17.3■□□□□ 0.36
CAPN1-203ENST00000525013 REPS1Q96D71 796 aa17.3■□□□□ 0.36
CAPN1-203ENST00000525013 DMRT3Q9NQL9 472 aa17.3■□□□□ 0.36
CAPN1-203ENST00000525013 ZNF223Q9UK11 482 aaPredicted RBP17.3■□□□□ 0.36
CAPN1-203ENST00000525013 SYNDIG1LA6NDD5 238 aa17.29■□□□□ 0.36
CAPN1-203ENST00000525013 TRIM49D1C9J1S8 452 aa17.29■□□□□ 0.36
CAPN1-203ENST00000525013 ZG16O60844 167 aa17.29■□□□□ 0.36
CAPN1-203ENST00000525013 WISP2O76076 250 aa17.29■□□□□ 0.36
CAPN1-203ENST00000525013 MLYCDO95822 493 aa17.29■□□□□ 0.36
CAPN1-203ENST00000525013 TRHRP34981 398 aaPredicted RBP17.29■□□□□ 0.36
CAPN1-203ENST00000525013 MAGEA12P43365 314 aa17.29■□□□□ 0.36
CAPN1-203ENST00000525013 GPR143P51810 404 aa17.29■□□□□ 0.36
CAPN1-203ENST00000525013 RPS13P62277 151 aaKnown RBP17.29■□□□□ 0.36
CAPN1-203ENST00000525013 SLAMF1Q13291 335 aa17.29■□□□□ 0.36
CAPN1-203ENST00000525013 SERTAD2Q14140 314 aa17.29■□□□□ 0.36
CAPN1-203ENST00000525013 CEP112Q8N8E3 955 aa17.29■□□□□ 0.36
CAPN1-203ENST00000525013 OR14A16Q8NHC5 309 aa17.29■□□□□ 0.36
CAPN1-203ENST00000525013 DAZLQ92904 295 aaKnown RBP17.29■□□□□ 0.36
CAPN1-203ENST00000525013 PHF21BQ96EK2 531 aa17.29■□□□□ 0.36
CAPN1-203ENST00000525013 OR8D2Q9GZM6 311 aa17.29■□□□□ 0.36
CAPN1-203ENST00000525013 VTI1BQ9UEU0 232 aa17.29■□□□□ 0.36
CAPN1-203ENST00000525013 SH3BGRL2Q9UJC5 107 aa17.29■□□□□ 0.36
CAPN1-203ENST00000525013 NFU1Q9UMS0 254 aa17.29■□□□□ 0.36
CAPN1-203ENST00000525013 PPIEQ9UNP9 301 aaKnown RBP17.29■□□□□ 0.36
CAPN1-203ENST00000525013 RNF11Q9Y3C5 154 aa17.29■□□□□ 0.36
CAPN1-203ENST00000525013 TEX15Q9BXT5 2789 aa17.28■□□□□ 0.36
CAPN1-203ENST00000525013 ITPR2Q14571 2701 aa17.28■□□□□ 0.36
CAPN1-203ENST00000525013 ASPDHA6ND91 283 aa17.28■□□□□ 0.36
CAPN1-203ENST00000525013 C17orf105B2RV13 164 aa17.28■□□□□ 0.36
CAPN1-203ENST00000525013 NPIPA5E9PKD4 350 aa17.28■□□□□ 0.36
CAPN1-203ENST00000525013 NME2P1O60361 137 aa17.28■□□□□ 0.36
CAPN1-203ENST00000525013 UGDHO60701 494 aa17.28■□□□□ 0.36
CAPN1-203ENST00000525013 SMIM24O75264 130 aa17.28■□□□□ 0.36
CAPN1-203ENST00000525013 ITGA10O75578 1167 aa17.28■□□□□ 0.36
CAPN1-203ENST00000525013 SCELO95171 688 aa17.28■□□□□ 0.36
CAPN1-203ENST00000525013 NME2P22392 152 aa17.28■□□□□ 0.36
CAPN1-203ENST00000525013 PTX3P26022 381 aaPredicted RBP17.28■□□□□ 0.36
CAPN1-203ENST00000525013 CNTFP26441 200 aa17.28■□□□□ 0.36
CAPN1-203ENST00000525013 TSNAXIP1Q2TAA8 658 aa17.28■□□□□ 0.36
CAPN1-203ENST00000525013 ZNF227Q86WZ6 799 aa17.28■□□□□ 0.36
CAPN1-203ENST00000525013 IFT20Q8IY31 132 aa17.28■□□□□ 0.36
CAPN1-203ENST00000525013 CYP4Z2PQ8N1L4 340 aa17.28■□□□□ 0.36
CAPN1-203ENST00000525013 ARMC10Q8N2F6 343 aa17.28■□□□□ 0.36
CAPN1-203ENST00000525013 PTPMT1Q8WUK0 201 aaPredicted RBP17.28■□□□□ 0.36
CAPN1-203ENST00000525013 DCAKDQ8WVC6 231 aa17.28■□□□□ 0.36
CAPN1-203ENST00000525013 RELTQ969Z4 430 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms