RNA–Protein interactions for RNA: ENST00000524955.1

CHMP4A-202, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 268 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-202ENST00000524955 ACPPP15309 386 aa4.32□□□□□ -1.72
CHMP4A-202ENST00000524955 MMP11P24347 488 aa4.32□□□□□ -1.72
CHMP4A-202ENST00000524955 GSTM2P28161 218 aa4.32□□□□□ -1.72
CHMP4A-202ENST00000524955 EPHA3P29320 983 aa4.32□□□□□ -1.72
CHMP4A-202ENST00000524955 SERPINB1P30740 379 aa4.32□□□□□ -1.72
CHMP4A-202ENST00000524955 FEN1P39748 380 aaKnown RBP4.32□□□□□ -1.72
CHMP4A-202ENST00000524955 PGDP52209 483 aa4.32□□□□□ -1.72
CHMP4A-202ENST00000524955 MAPK12P53778 367 aa4.32□□□□□ -1.72
CHMP4A-202ENST00000524955 NME5P56597 212 aa4.32□□□□□ -1.72
CHMP4A-202ENST00000524955 TAS2R50P59544 299 aa4.32□□□□□ -1.72
CHMP4A-202ENST00000524955 GUCY1A3Q02108 690 aa4.32□□□□□ -1.72
CHMP4A-202ENST00000524955 FOLH1Q04609 750 aa4.32□□□□□ -1.72
CHMP4A-202ENST00000524955 SRSF11Q05519 484 aaKnown RBP4.32□□□□□ -1.72
CHMP4A-202ENST00000524955 DUSP2Q05923 314 aa4.32□□□□□ -1.72
CHMP4A-202ENST00000524955 ACTN3Q08043 901 aaPredicted RBP4.32□□□□□ -1.72
CHMP4A-202ENST00000524955 TGM3Q08188 693 aa4.32□□□□□ -1.72
CHMP4A-202ENST00000524955 ACSM2AQ08AH3 577 aa4.32□□□□□ -1.72
CHMP4A-202ENST00000524955 CSTF3Q12996 717 aaKnown RBP4.32□□□□□ -1.72
CHMP4A-202ENST00000524955 CUL3Q13618 768 aa4.32□□□□□ -1.72
CHMP4A-202ENST00000524955 SSPNQ14714 243 aa4.32□□□□□ -1.72
CHMP4A-202ENST00000524955 PCOLCEQ15113 449 aa4.32□□□□□ -1.72
CHMP4A-202ENST00000524955 LTB4RQ15722 352 aa4.32□□□□□ -1.72
CHMP4A-202ENST00000524955 BTBD16Q32M84 506 aa4.32□□□□□ -1.72
CHMP4A-202ENST00000524955 LINC00303Q3SY05 128 aa4.32□□□□□ -1.72
CHMP4A-202ENST00000524955 TUBB8Q3ZCM7 444 aa4.32□□□□□ -1.72
CHMP4A-202ENST00000524955 RFTN2Q52LD8 501 aaPredicted RBP4.32□□□□□ -1.72
CHMP4A-202ENST00000524955 TMEM35AQ53FP2 167 aa4.32□□□□□ -1.72
CHMP4A-202ENST00000524955 HSP90B2PQ58FF3 399 aa4.32□□□□□ -1.72
CHMP4A-202ENST00000524955 NDUFAF5Q5TEU4 345 aa4.32□□□□□ -1.72
CHMP4A-202ENST00000524955 B3GNTL1Q67FW5 361 aaPredicted RBP4.32□□□□□ -1.72
CHMP4A-202ENST00000524955 ACSM2BQ68CK6 577 aa4.32□□□□□ -1.72
CHMP4A-202ENST00000524955 MRM1Q6IN84 353 aaKnown RBP4.32□□□□□ -1.72
CHMP4A-202ENST00000524955 C16orf47Q6ZP98 133 aaPredicted RBP4.32□□□□□ -1.72
CHMP4A-202ENST00000524955 GPR155Q7Z3F1 870 aa4.32□□□□□ -1.72
CHMP4A-202ENST00000524955 MAVSQ7Z434 540 aa4.32□□□□□ -1.72
CHMP4A-202ENST00000524955 CPEB2Q7Z5Q1 589 aaKnown RBP4.32□□□□□ -1.72
CHMP4A-202ENST00000524955 ANKRD37Q7Z713 158 aa4.32□□□□□ -1.72
CHMP4A-202ENST00000524955 NUDT13Q86X67 352 aa4.32□□□□□ -1.72
CHMP4A-202ENST00000524955 WDR75Q8IWA0 830 aaKnown RBP4.32□□□□□ -1.72
CHMP4A-202ENST00000524955 METTL4Q8N3J2 472 aa4.32□□□□□ -1.72
CHMP4A-202ENST00000524955 KIF2BQ8N4N8 673 aa4.32□□□□□ -1.72
CHMP4A-202ENST00000524955 SIRT6Q8N6T7 355 aa4.32□□□□□ -1.72
CHMP4A-202ENST00000524955 EXD3Q8N9H8 876 aa4.32□□□□□ -1.72
CHMP4A-202ENST00000524955 SIMC1Q8NDZ2 872 aa4.32□□□□□ -1.72
CHMP4A-202ENST00000524955 OR11G2Q8NGC1 345 aa4.32□□□□□ -1.72
CHMP4A-202ENST00000524955 LRRC8CQ8TDW0 803 aa4.32□□□□□ -1.72
CHMP4A-202ENST00000524955 C16orf78Q8WTQ4 265 aa4.32□□□□□ -1.72
CHMP4A-202ENST00000524955 THAP3Q8WTV1 239 aaPredicted RBP4.32□□□□□ -1.72
CHMP4A-202ENST00000524955 METTL21AQ8WXB1 218 aa4.32□□□□□ -1.72
CHMP4A-202ENST00000524955 EXOSC8Q96B26 276 aaKnown RBP4.32□□□□□ -1.72
CHMP4A-202ENST00000524955 ANKRD9Q96BM1 317 aaPredicted RBP4.32□□□□□ -1.72
CHMP4A-202ENST00000524955 TM4SF18Q96CE8 201 aa4.32□□□□□ -1.72
CHMP4A-202ENST00000524955 TUBGCP3Q96CW5 907 aa4.32□□□□□ -1.72
CHMP4A-202ENST00000524955 C19orf60Q96EN9 201 aa4.32□□□□□ -1.72
CHMP4A-202ENST00000524955 MVB12AQ96EY5 273 aa4.32□□□□□ -1.72
CHMP4A-202ENST00000524955 TSSK3Q96PN8 268 aa4.32□□□□□ -1.72
CHMP4A-202ENST00000524955 DPH2Q9BQC3 489 aaPredicted RBP4.32□□□□□ -1.72
CHMP4A-202ENST00000524955 ARHGAP9Q9BRR9 750 aa4.32□□□□□ -1.72
CHMP4A-202ENST00000524955 CENPKQ9BS16 269 aa4.32□□□□□ -1.72
CHMP4A-202ENST00000524955 ALOXE3Q9BYJ1 711 aa4.32□□□□□ -1.72
CHMP4A-202ENST00000524955 TGIF2Q9GZN2 237 aa4.32□□□□□ -1.72
CHMP4A-202ENST00000524955 ILKAPQ9H0C8 392 aaPredicted RBP4.32□□□□□ -1.72
CHMP4A-202ENST00000524955 ING2Q9H160 280 aa4.32□□□□□ -1.72
CHMP4A-202ENST00000524955 RABEP2Q9H5N1 569 aa4.32□□□□□ -1.72
CHMP4A-202ENST00000524955 DDX31Q9H8H2 851 aaKnown RBP4.32□□□□□ -1.72
CHMP4A-202ENST00000524955 WDR54Q9H977 334 aa4.32□□□□□ -1.72
CHMP4A-202ENST00000524955 LRTM1Q9HBL6 345 aa4.32□□□□□ -1.72
CHMP4A-202ENST00000524955 EML4Q9HC35 981 aaKnown RBP4.32□□□□□ -1.72
CHMP4A-202ENST00000524955 ZBTB20Q9HC78 741 aaPredicted RBP4.32□□□□□ -1.72
CHMP4A-202ENST00000524955 PFDN4Q9NQP4 134 aa4.32□□□□□ -1.72
CHMP4A-202ENST00000524955 ZNF71Q9NQZ8 489 aaPredicted RBP4.32□□□□□ -1.72
CHMP4A-202ENST00000524955 ENAMQ9NRM1 1142 aa4.32□□□□□ -1.72
CHMP4A-202ENST00000524955 C14orf105Q9NVL8 296 aa4.32□□□□□ -1.72
CHMP4A-202ENST00000524955 LUZP4Q9P127 313 aa4.32□□□□□ -1.72
CHMP4A-202ENST00000524955 HEY2Q9UBP5 337 aa4.32□□□□□ -1.72
CHMP4A-202ENST00000524955 LHX6Q9UPM6 363 aa4.32□□□□□ -1.72
CHMP4A-202ENST00000524955 POLHQ9Y253 713 aa4.32□□□□□ -1.72
CHMP4A-202ENST00000524955 STK38LQ9Y2H1 464 aa4.32□□□□□ -1.72
CHMP4A-202ENST00000524955 PADI2Q9Y2J8 665 aa4.32□□□□□ -1.72
CHMP4A-202ENST00000524955 SSUH2Q9Y2M2 353 aa4.32□□□□□ -1.72
CHMP4A-202ENST00000524955 RAP2CQ9Y3L5 183 aa4.32□□□□□ -1.72
CHMP4A-202ENST00000524955 ASB4Q9Y574 426 aa4.32□□□□□ -1.72
CHMP4A-202ENST00000524955 KCNMB2Q9Y691 235 aa4.32□□□□□ -1.72
CHMP4A-202ENST00000524955 CNOT1A5YKK6 2376 aaKnown RBP4.32□□□□□ -1.72
CHMP4A-202ENST00000524955 WDFY3Q8IZQ1 3526 aa4.32□□□□□ -1.72
CHMP4A-202ENST00000524955 ASPMQ8IZT6 3477 aa4.31□□□□□ -1.72
CHMP4A-202ENST00000524955 A0A088AWK7 358 aa4.31□□□□□ -1.72
CHMP4A-202ENST00000524955 IGKV3D-11A0A0A0MRZ8 115 aa4.31□□□□□ -1.72
CHMP4A-202ENST00000524955 IGHV1-45A0A0A0MS14 117 aa4.31□□□□□ -1.72
CHMP4A-202ENST00000524955 NSG1A0A0A6YYJ2 146 aa4.31□□□□□ -1.72
CHMP4A-202ENST00000524955 TCP11X1B4DZS4 312 aa4.31□□□□□ -1.72
CHMP4A-202ENST00000524955 DYNC1I1O14576 645 aa4.31□□□□□ -1.72
CHMP4A-202ENST00000524955 LSM1O15116 133 aaKnown RBP4.31□□□□□ -1.72
CHMP4A-202ENST00000524955 POLR3GO15318 223 aaPredicted RBP4.31□□□□□ -1.72
CHMP4A-202ENST00000524955 RGS14O43566 566 aa4.31□□□□□ -1.72
CHMP4A-202ENST00000524955 DIAPH2O60879 1101 aa4.31□□□□□ -1.72
CHMP4A-202ENST00000524955 SNNO75324 88 aaPredicted RBP4.31□□□□□ -1.72
CHMP4A-202ENST00000524955 RSL1D1O76021 490 aaKnown RBP4.31□□□□□ -1.72
CHMP4A-202ENST00000524955 MYO1DO94832 1006 aa4.31□□□□□ -1.72
CHMP4A-202ENST00000524955 SEMA3DO95025 777 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms